Strain Fitness in Shewanella amazonensis SB2B around Sama_2693

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
3,219,556	+				+0.5
3,219,577	+				+1.1
3,219,577	+				-0.6
3,219,577	+				-2.3
3,219,578	-				-0.7
3,219,584	+				-1.3
3,219,584	+				-2.3
3,219,632	+				-1.1
3,219,632	+				-1.8
3,219,633	-				-0.0
3,219,633	-				-0.3
3,219,633	-				-2.8
3,219,633	-				-0.0
3,219,639	+				-2.4
3,219,656	-				+0.5
3,219,656	-				-0.7
3,219,710	-		Sama_2691	0.25	-0.1
3,219,710	-		Sama_2691	0.25	+1.1
3,219,739	+		Sama_2691	0.35	-0.5
3,219,739	+		Sama_2691	0.35	+2.0
3,219,739	+		Sama_2691	0.35	-1.2
3,219,740	-		Sama_2691	0.35	-0.0
3,219,740	-		Sama_2691	0.35	+0.7
3,219,740	-		Sama_2691	0.35	+0.2
3,219,740	-		Sama_2691	0.35	+0.9
3,219,802	-		Sama_2691	0.57	+0.4
3,219,802	-		Sama_2691	0.57	+0.9
3,219,833	+		Sama_2691	0.68	+0.1
3,219,833	+		Sama_2691	0.68	-0.6
3,219,833	+		Sama_2691	0.68	+0.7
3,219,834	-		Sama_2691	0.68	-0.3
3,219,879	+		Sama_2691	0.84	+2.9
3,219,879	+		Sama_2691	0.84	-0.6
3,219,879	+		Sama_2691	0.84	+0.6
3,219,880	-		Sama_2691	0.85	-2.2
3,219,880	-		Sama_2691	0.85	-1.6
3,219,880	-		Sama_2691	0.85	-1.0
3,219,881	+		Sama_2691	0.85	-0.2
3,219,882	-		Sama_2691	0.85	+0.4
3,219,882	-		Sama_2691	0.85	+0.3
3,219,926	-				-0.4
3,219,949	+				+0.4
3,220,016	+				-0.8
3,220,017	-				+0.9
3,220,093	-				-0.8
3,220,098	+				+0.4
3,220,105	+				-1.2
3,220,105	+				+0.8
3,220,106	-				-0.6
3,220,177	+		Sama_2692	0.29	+0.5
3,220,177	+		Sama_2692	0.29	-1.0
3,220,177	+		Sama_2692	0.29	+0.3
3,220,177	+		Sama_2692	0.29	+0.5
3,220,177	+		Sama_2692	0.29	-0.7
3,220,177	+		Sama_2692	0.29	-0.9
3,220,177	+		Sama_2692	0.29	+2.7
3,220,177	+		Sama_2692	0.29	-1.6
3,220,177	+		Sama_2692	0.29	-0.2
3,220,178	-		Sama_2692	0.29	+0.5
3,220,178	-		Sama_2692	0.29	+1.5
3,220,178	-		Sama_2692	0.29	+0.0
3,220,178	-		Sama_2692	0.29	+2.0
3,220,178	-		Sama_2692	0.29	-1.9
3,220,206	+		Sama_2692	0.38	+1.1
3,220,206	+		Sama_2692	0.38	-0.3
3,220,206	+		Sama_2692	0.38	+0.7
3,220,206	+		Sama_2692	0.38	-1.1
3,220,206	+		Sama_2692	0.38	-0.8
3,220,207	-		Sama_2692	0.38	+0.9
3,220,207	-		Sama_2692	0.38	+0.6
3,220,207	-		Sama_2692	0.38	+1.1
3,220,207	-		Sama_2692	0.38	-0.8
3,220,207	-		Sama_2692	0.38	+0.2
3,220,210	+		Sama_2692	0.39	-2.5
3,220,210	+		Sama_2692	0.39	-0.3
3,220,211	-		Sama_2692	0.39	+0.2
3,220,211	-		Sama_2692	0.39	+2.0
3,220,211	-		Sama_2692	0.39	-1.4
3,220,211	-		Sama_2692	0.39	-2.4
3,220,211	-		Sama_2692	0.39	-2.0
3,220,237	-		Sama_2692	0.47	-0.1
3,220,244	+		Sama_2692	0.49	+1.2
3,220,245	-		Sama_2692	0.50	-1.8
3,220,245	-		Sama_2692	0.50	+0.1
3,220,245	-		Sama_2692	0.50	+0.8
3,220,315	-		Sama_2692	0.71	+1.2
3,220,315	-		Sama_2692	0.71	-0.2
3,220,345	+		Sama_2692	0.80	+0.7
3,220,355	+		Sama_2692	0.83	-0.3
3,220,356	-		Sama_2692	0.83	+1.4
3,220,356	-		Sama_2692	0.83	-1.0
3,220,356	-		Sama_2692	0.83	+0.0
3,220,366	+		Sama_2692	0.86	+0.9
3,220,367	-		Sama_2692	0.87	+1.0
3,220,379	-				+2.7
3,220,386	+				+1.0
3,220,386	+				-0.2
3,220,387	-				+0.3
3,220,387	-				+1.4
3,220,387	-				+1.1
3,220,387	-				-1.3
3,220,387	-				-2.2
3,220,387	-				-2.1
3,220,387	-				-3.4
3,220,387	-				-0.9
3,220,416	-				-0.1
3,220,486	+				+0.4
3,220,492	+				+1.8
3,220,492	+				+0.1
3,220,493	-				-2.8
3,220,551	-				-0.6
3,220,558	+				+0.3
3,220,559	-				-0.1
3,220,653	+		Sama_2693	0.14	-0.8
3,220,653	+		Sama_2693	0.14	-2.3
3,220,689	+		Sama_2693	0.18	-0.5
3,220,784	+		Sama_2693	0.30	-1.2
3,220,784	+		Sama_2693	0.30	+0.4
3,220,785	-		Sama_2693	0.30	+0.7
3,220,873	+		Sama_2693	0.42	-1.3
3,220,873	+		Sama_2693	0.42	+0.6
3,220,873	+		Sama_2693	0.42	-1.0
3,220,873	+		Sama_2693	0.42	-2.9
3,220,873	+		Sama_2693	0.42	-1.6
3,220,873	+		Sama_2693	0.42	-1.2
3,220,873	+		Sama_2693	0.42	-1.5
3,220,873	+		Sama_2693	0.42	-2.9
3,220,873	+		Sama_2693	0.42	+0.8
3,220,873	+		Sama_2693	0.42	-0.4
3,220,873	+		Sama_2693	0.42	+0.2
3,220,873	+		Sama_2693	0.42	+0.9
3,220,873	+		Sama_2693	0.42	-0.2
3,220,873	+		Sama_2693	0.42	-2.8
3,220,873	+		Sama_2693	0.42	-1.2
3,220,873	+		Sama_2693	0.42	-0.3
3,220,874	-		Sama_2693	0.42	-2.1
3,220,874	-		Sama_2693	0.42	+0.2
3,220,874	-		Sama_2693	0.42	-0.0
3,220,874	-		Sama_2693	0.42	-0.6
3,220,874	-		Sama_2693	0.42	-1.0
3,220,874	-		Sama_2693	0.42	-1.4
3,220,874	-		Sama_2693	0.42	+0.2
3,220,874	-		Sama_2693	0.42	-0.9
3,220,874	-		Sama_2693	0.42	-1.5
3,220,874	-		Sama_2693	0.42	-1.0
3,220,961	+		Sama_2693	0.53	-0.8
3,220,962	-		Sama_2693	0.53	-2.1
3,220,978	+		Sama_2693	0.55	-1.3
3,220,978	+		Sama_2693	0.55	+0.6
3,220,978	+		Sama_2693	0.55	-0.0
3,220,978	+		Sama_2693	0.55	+0.6
3,220,979	-		Sama_2693	0.55	-1.7
3,221,009	+		Sama_2693	0.59	+1.3
3,221,010	-		Sama_2693	0.59	-2.6
3,221,176	+		Sama_2693	0.80	+1.5
3,221,176	+		Sama_2693	0.80	+1.1
3,221,176	+		Sama_2693	0.80	-2.9
3,221,176	+		Sama_2693	0.80	+0.4
3,221,177	-		Sama_2693	0.80	-1.1
3,221,177	-		Sama_2693	0.80	-0.2
3,221,296	+				-0.8
3,221,296	+				-0.5
3,221,298	-				-0.8
3,221,302	-				-0.2
3,221,302	-				-0.8
3,221,310	+				+0.3
3,221,310	+				-0.3
3,221,356	+				+0.4
3,221,356	+				+0.4
3,221,357	-				+0.7
3,221,357	-				+0.5
3,221,357	-				-1.4
3,221,357	-				+0.5
3,221,399	-				+0.7
3,221,415	-				+0.5
3,221,415	-				+0.5
3,221,448	+				-0.9
3,221,448	+				+1.0
3,221,448	+				+0.1
3,221,448	+				-0.6
3,221,449	-				+1.0
3,221,453	+				+0.0
3,221,453	+				+0.3
3,221,453	+				+0.3
3,221,499	+				-1.0
3,221,499	+				+1.1
3,221,499	+				-0.4
3,221,500	-				+1.7
3,221,500	-				+0.7
3,221,500	-				-0.1
3,221,506	+				+0.8
3,221,506	+				-0.7
3,221,507	-				+0.3
3,221,507	-				-0.7
3,221,520	-				+0.0
3,221,531	+				+2.0
3,221,532	-				-1.5
3,221,532	-				-3.6
3,221,570	+		Sama_2694	0.16	-0.5
3,221,571	-		Sama_2694	0.17	-0.4
3,221,571	-		Sama_2694	0.17	+1.3
3,221,576	+		Sama_2694	0.18	-1.3
3,221,576	+		Sama_2694	0.18	-0.6
3,221,576	+		Sama_2694	0.18	+2.0
3,221,577	-		Sama_2694	0.18	-0.6
3,221,577	-		Sama_2694	0.18	-1.7
3,221,707	+		Sama_2694	0.44	+2.1
3,221,707	+		Sama_2694	0.44	+0.5
3,221,708	-		Sama_2694	0.44	-0.2
3,221,708	-		Sama_2694	0.44	-0.5
3,221,774	+		Sama_2694	0.57	-0.0
3,221,775	-		Sama_2694	0.57	+0.6
3,221,775	-		Sama_2694	0.57	+1.3
3,221,825	+		Sama_2694	0.67	-1.0
3,221,825	+		Sama_2694	0.67	-0.1
3,221,890	+		Sama_2694	0.80	+1.7
3,221,890	+		Sama_2694	0.80	+0.6
3,221,890	+		Sama_2694	0.80	-0.1
3,221,890	+		Sama_2694	0.80	-0.3
3,221,891	-		Sama_2694	0.80	-1.2
3,221,891	-		Sama_2694	0.80	+0.3
3,221,891	-		Sama_2694	0.80	+1.7
3,221,986	+				-2.1
3,222,123	-				+0.2
3,222,132	+				+0.5
3,222,132	+				+0.3
3,222,132	+				-1.3
3,222,133	-				-0.8
3,222,133	-				+2.3
3,222,149	+				+1.1
3,222,179	+				-2.2
3,222,179	+				+0.4
3,222,182	+				-3.3
3,222,205	+				+2.2
3,222,226	+				-0.6
3,222,227	-				+1.0
3,222,227	-				+1.0
3,222,228	+				+1.0
3,222,228	+				-0.3
3,222,228	+				-2.2
3,222,228	+				+0.7
3,222,228	+				+0.4
3,222,228	+				+0.2
3,222,228	+				+1.5
3,222,228	+				-1.1
3,222,228	+				+2.0
3,222,228	+				+2.2
3,222,228	+				+0.0
3,222,229	-				-2.0
3,222,229	-				+0.1
3,222,229	-				+1.4
3,222,229	-				+0.8
3,222,229	-				-1.2
3,222,229	-				-1.9
3,222,229	-				+0.3
3,222,229	-				-0.0
3,222,229	-				+0.9
3,222,229	-				-1.1
3,222,229	-				-1.1
3,222,229	-				+0.3
3,222,229	-				-0.2
3,222,229	-				-0.4
3,222,229	-				-1.2
3,222,229	-				-0.4
3,222,269	+				+0.7
3,222,270	-				+1.6