Strain Fitness in Shewanella amazonensis SB2B around Sama_2583

Experiment: L-Arginine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntleuS and Sama_2583 are separated by 95 nucleotidesSama_2583 and Sama_2584 overlap by 1 nucleotides Sama_2582: leuS - leucyl-tRNA synthetase (RefSeq), at 3,089,606 to 3,092,200 leuS Sama_2583: Sama_2583 - rare lipoprotein B (RefSeq), at 3,092,296 to 3,092,790 _2583 Sama_2584: Sama_2584 - DNA-directed DNA polymerase (RefSeq), at 3,092,790 to 3,093,818 _2584 Position (kb) 3092 3093Strain fitness (log2 ratio) -1 0 1at 3092.205 kb on + strandat 3092.271 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
remove
3,092,205 + -0.4
3,092,271 + -1.4

Or see this region's nucleotide sequence