Strain Fitness in Shewanella amazonensis SB2B around Sama_2442

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
2,938,216	-				+0.6
2,938,312	-				-3.8
2,938,317	+				-1.6
2,938,318	-				-2.4
2,938,340	+				-1.7
2,938,340	+				-0.2
2,938,341	-				-3.3
2,938,341	-				-2.1
2,938,342	+				+1.7
2,938,342	+				-0.3
2,938,356	-				-3.3
2,938,356	-				-3.0
2,938,362	+				-1.3
2,938,362	+				-1.0
2,938,362	+				-0.8
2,938,362	+				-0.6
2,938,377	+				+1.1
2,938,377	+				+0.5
2,938,378	-				-2.6
2,938,378	-				-3.1
2,938,380	+				+0.8
2,938,380	+				-0.2
2,938,552	-		Sama_2441	0.18	-3.4
2,938,552	-		Sama_2441	0.18	-3.0
2,938,552	-		Sama_2441	0.18	-3.7
2,938,552	-		Sama_2441	0.18	-2.9
2,938,552	-		Sama_2441	0.18	-2.9
2,938,552	-		Sama_2441	0.18	-1.8
2,938,552	-		Sama_2441	0.18	-2.8
2,938,751	+		Sama_2441	0.45	-2.9
2,938,759	+		Sama_2441	0.46	-4.2
2,938,760	+		Sama_2441	0.46	-3.8
2,938,760	+		Sama_2441	0.46	+1.4
2,938,760	+		Sama_2441	0.46	-3.3
2,938,760	+		Sama_2441	0.46	-3.2
2,938,761	-		Sama_2441	0.46	-3.3
2,938,780	-		Sama_2441	0.49	-1.6
2,938,833	+		Sama_2441	0.56	-0.8
2,938,833	+		Sama_2441	0.56	-2.2
2,938,834	-		Sama_2441	0.56	-3.0
2,938,834	-		Sama_2441	0.56	-2.9
2,938,834	-		Sama_2441	0.56	-2.6
2,938,862	-		Sama_2441	0.60	-2.6
2,938,862	-		Sama_2441	0.60	-3.8
2,938,862	-		Sama_2441	0.60	-2.6
2,938,876	+		Sama_2441	0.62	-3.3
2,938,895	+		Sama_2441	0.64	-3.0
2,938,896	-		Sama_2441	0.64	-1.2
2,938,896	-		Sama_2441	0.64	-4.1
2,938,896	-		Sama_2441	0.64	-3.0
2,938,917	-		Sama_2441	0.67	-2.8
2,938,927	+		Sama_2441	0.69	-2.3
2,939,035	-		Sama_2441	0.83	-3.9
2,939,047	+		Sama_2441	0.85	-3.1
2,939,047	+		Sama_2441	0.85	-3.1
2,939,047	+		Sama_2441	0.85	-2.4
2,939,047	+		Sama_2441	0.85	-1.0
2,939,048	-		Sama_2441	0.85	-3.3
2,939,048	-		Sama_2441	0.85	-2.7
2,939,048	-		Sama_2441	0.85	-1.9
2,939,048	-		Sama_2441	0.85	-2.7
2,939,048	-		Sama_2441	0.85	-1.8
2,939,048	-		Sama_2441	0.85	-3.5
2,939,048	-		Sama_2441	0.85	-2.7
2,939,092	-				-3.6
2,939,158	+				-0.0
2,939,158	+				-2.3
2,939,239	-				-2.3
2,939,239	-				-2.2
2,939,350	+		Sama_2442	0.13	-4.2
2,939,355	+		Sama_2442	0.13	-3.5
2,939,355	+		Sama_2442	0.13	-3.7
2,939,356	-		Sama_2442	0.13	-1.6
2,939,372	+		Sama_2442	0.14	-3.0
2,939,373	-		Sama_2442	0.14	-3.5
2,939,412	+		Sama_2442	0.17	-2.9
2,939,412	+		Sama_2442	0.17	-1.6
2,939,412	+		Sama_2442	0.17	-2.7
2,939,412	+		Sama_2442	0.17	-0.3
2,939,413	-		Sama_2442	0.17	-2.8
2,939,464	+		Sama_2442	0.21	-2.3
2,939,568	+		Sama_2442	0.28	-0.2
2,939,568	+		Sama_2442	0.28	-3.2
2,939,568	+		Sama_2442	0.28	-2.1
2,939,568	+		Sama_2442	0.28	-1.2
2,939,568	+		Sama_2442	0.28	-3.8
2,939,569	-		Sama_2442	0.28	-2.2
2,939,569	-		Sama_2442	0.28	-2.5
2,939,572	+		Sama_2442	0.28	-3.5
2,939,572	+		Sama_2442	0.28	-1.7
2,939,590	+		Sama_2442	0.30	-1.3
2,939,594	-		Sama_2442	0.30	-3.2
2,939,625	+		Sama_2442	0.32	-1.9
2,939,625	+		Sama_2442	0.32	-2.6
2,939,625	+		Sama_2442	0.32	-0.8
2,939,626	-		Sama_2442	0.32	-3.1
2,939,626	-		Sama_2442	0.32	-3.4
2,939,626	-		Sama_2442	0.32	-4.6
2,939,892	+		Sama_2442	0.51	-3.5
2,939,893	-		Sama_2442	0.51	-2.0
2,939,893	-		Sama_2442	0.51	-3.9
2,939,893	-		Sama_2442	0.51	-2.3
2,939,897	-		Sama_2442	0.52	-1.9
2,939,978	+		Sama_2442	0.57	-3.9
2,939,979	-		Sama_2442	0.57	-1.7
2,939,979	-		Sama_2442	0.57	-3.4
2,939,991	-		Sama_2442	0.58	-3.5
2,939,995	+		Sama_2442	0.59	-4.8
2,940,037	+		Sama_2442	0.62	-4.8
2,940,038	-		Sama_2442	0.62	-3.4
2,940,115	+		Sama_2442	0.67	-3.1
2,940,116	-		Sama_2442	0.67	-3.0
2,940,116	-		Sama_2442	0.67	-3.7
2,940,128	+		Sama_2442	0.68	-2.6
2,940,146	+		Sama_2442	0.69	-2.6
2,940,146	+		Sama_2442	0.69	-3.7
2,940,152	+		Sama_2442	0.70	-2.0
2,940,152	+		Sama_2442	0.70	-4.3
2,940,152	+		Sama_2442	0.70	-3.8
2,940,153	-		Sama_2442	0.70	-2.8
2,940,153	-		Sama_2442	0.70	-3.0
2,940,153	-		Sama_2442	0.70	-3.2
2,940,153	-		Sama_2442	0.70	-1.7
2,940,153	-		Sama_2442	0.70	-2.7
2,940,153	-		Sama_2442	0.70	-2.2
2,940,161	-		Sama_2442	0.70	-2.6
2,940,161	-		Sama_2442	0.70	-4.3
2,940,232	+		Sama_2442	0.76	-3.9
2,940,232	+		Sama_2442	0.76	-2.5
2,940,335	+		Sama_2442	0.83	-2.5
2,940,350	+		Sama_2442	0.84	-1.0
2,940,350	+		Sama_2442	0.84	-2.2
2,940,350	+		Sama_2442	0.84	-1.9
2,940,350	+		Sama_2442	0.84	-3.1
2,940,350	+		Sama_2442	0.84	-3.9
2,940,350	+		Sama_2442	0.84	-3.2
2,940,350	+		Sama_2442	0.84	-4.0
2,940,350	+		Sama_2442	0.84	-3.2
2,940,350	+		Sama_2442	0.84	-4.0
2,940,350	+		Sama_2442	0.84	-2.2
2,940,350	+		Sama_2442	0.84	-1.6
2,940,351	-		Sama_2442	0.84	-3.0
2,940,351	-		Sama_2442	0.84	-2.5
2,940,351	-		Sama_2442	0.84	-3.8
2,940,351	-		Sama_2442	0.84	-4.0
2,940,352	+		Sama_2442	0.84	-3.0
2,940,352	+		Sama_2442	0.84	-2.8
2,940,352	+		Sama_2442	0.84	-1.3
2,940,352	+		Sama_2442	0.84	-3.6
2,940,352	+		Sama_2442	0.84	-3.6
2,940,352	+		Sama_2442	0.84	-3.0
2,940,352	+		Sama_2442	0.84	-3.2
2,940,353	-		Sama_2442	0.84	-1.8
2,940,353	-		Sama_2442	0.84	-2.3
2,940,353	-		Sama_2442	0.84	-0.8
2,940,353	-		Sama_2442	0.84	-1.8
2,940,353	-		Sama_2442	0.84	-3.0
2,940,373	+		Sama_2442	0.86	-2.8
2,940,418	+		Sama_2442	0.89	-2.2
2,940,418	+		Sama_2442	0.89	-2.3
2,940,418	+		Sama_2442	0.89	-0.8
2,940,418	+		Sama_2442	0.89	-3.0
2,940,418	+		Sama_2442	0.89	-4.0
2,940,418	+		Sama_2442	0.89	-2.5
2,940,419	-		Sama_2442	0.89	-2.5
2,940,419	-		Sama_2442	0.89	-2.0
2,940,475	+				-3.1
2,940,475	+				-2.9
2,940,476	-				-1.6
2,940,559	+				-2.2
2,940,559	+				-1.9
2,940,560	-				-2.6
2,940,560	-				-2.4
2,940,572	+				-1.5
2,940,572	+				-4.8
2,940,572	+				-2.7
2,940,572	+				-2.5
2,940,573	-				-1.3
2,940,573	-				-2.7
2,940,573	-				-3.4
2,940,573	-				-3.0
2,940,573	-				-2.7
2,940,573	-				-3.7
2,940,573	-				-3.7
2,940,573	-				-0.9
2,940,643	+		Sama_2443	0.12	-1.0
2,940,643	+		Sama_2443	0.12	-2.3
2,940,649	+		Sama_2443	0.13	-4.1
2,940,649	+		Sama_2443	0.13	-3.9
2,940,650	-		Sama_2443	0.13	-2.1
2,940,650	-		Sama_2443	0.13	-2.8
2,940,671	+		Sama_2443	0.17	-2.3
2,940,672	-		Sama_2443	0.17	-3.5
2,940,678	+		Sama_2443	0.18	-3.9
2,940,679	-		Sama_2443	0.18	-1.5
2,940,865	+		Sama_2443	0.51	-1.9
2,940,932	+		Sama_2443	0.62	-0.6
2,940,933	-		Sama_2443	0.63	-1.3
2,940,944	+		Sama_2443	0.65	-1.9
2,940,961	+		Sama_2443	0.68	-3.6
2,940,961	+		Sama_2443	0.68	-4.6
2,940,961	+		Sama_2443	0.68	-1.8
2,940,995	+		Sama_2443	0.74	-4.0
2,940,995	+		Sama_2443	0.74	-1.9
2,940,995	+		Sama_2443	0.74	-1.3
2,940,995	+		Sama_2443	0.74	-1.8
2,940,996	-		Sama_2443	0.74	-4.5
2,940,996	-		Sama_2443	0.74	-1.9
2,940,996	-		Sama_2443	0.74	-3.6
2,941,051	+		Sama_2443	0.83	-3.8
2,941,051	+		Sama_2443	0.83	-4.3
2,941,052	-		Sama_2443	0.84	-2.1
2,941,052	-		Sama_2443	0.84	-0.6
2,941,052	-		Sama_2443	0.84	-1.5
2,941,055	+		Sama_2443	0.84	-4.4
2,941,055	+		Sama_2443	0.84	-3.6
2,941,056	-		Sama_2443	0.84	-1.1
2,941,056	-		Sama_2443	0.84	-2.7
2,941,056	-		Sama_2443	0.84	-1.7
2,941,056	-		Sama_2443	0.84	-3.6
2,941,132	+				-2.1
2,941,132	+				-3.6
2,941,133	-				-3.9
2,941,133	-				-2.7
2,941,134	+				-1.3
2,941,134	+				-1.7
2,941,134	+				-2.5
2,941,135	-				-3.2
2,941,135	-				-3.9
2,941,143	+				+1.1
2,941,143	+				-0.3
2,941,143	+				-0.2
2,941,144	-				+0.3
2,941,144	-				-2.2
2,941,159	+				-0.1
2,941,159	+				-0.2
2,941,160	-				+1.2
2,941,181	+				-0.8
2,941,181	+				-0.2
2,941,197	-				-2.7
2,941,206	-				+0.5
2,941,280	+				+2.1
2,941,378	+		Sama_2444	0.16	-1.9
2,941,378	+		Sama_2444	0.16	-0.0
2,941,383	+		Sama_2444	0.16	-2.3
2,941,383	+		Sama_2444	0.16	+1.7
2,941,477	-		Sama_2444	0.25	+1.0
2,941,509	+		Sama_2444	0.28	+2.6
2,941,509	+		Sama_2444	0.28	+0.2
2,941,510	-		Sama_2444	0.28	-2.0
2,941,510	-		Sama_2444	0.28	+0.5
2,941,510	-		Sama_2444	0.28	+2.0
2,941,510	-		Sama_2444	0.28	+1.7
2,941,510	-		Sama_2444	0.28	-2.1
2,941,510	-		Sama_2444	0.28	-0.5
2,941,543	-		Sama_2444	0.31	+1.0
2,941,550	+		Sama_2444	0.32	+0.7
2,941,551	-		Sama_2444	0.32	+1.2