Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_2330 and Sama_2331 overlap by 8 nucleotides Sama_2331 and Sama_2332 overlap by 1 nucleotides Sama_2332 and Sama_2333 overlap by 20 nucleotides Sama_2333 and Sama_2334 overlap by 4 nucleotides
Sama_2330: Sama_2330 - hypothetical protein (RefSeq), at 2,796,037 to 2,797,044
_2330
Sama_2331: Sama_2331 - N-acylneuraminate-9-phosphate synthase (RefSeq), at 2,797,037 to 2,798,035
_2331
Sama_2332: Sama_2332 - UDP-N-acetylglucosamine 2-epimerase (RefSeq), at 2,798,035 to 2,799,201
_2332
Sama_2333: Sama_2333 - hypothetical protein (RefSeq), at 2,799,182 to 2,800,171
_2333
Sama_2334: Sama_2334 - acetyltransferase (RefSeq), at 2,800,168 to 2,800,665
_2334
Position (kb)
2798
2799
2800 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2797.268 kb on + strand, within Sama_2331 at 2797.280 kb on - strand, within Sama_2331 at 2797.303 kb on + strand, within Sama_2331 at 2797.426 kb on - strand, within Sama_2331 at 2797.456 kb on - strand, within Sama_2331 at 2797.456 kb on - strand, within Sama_2331 at 2797.506 kb on + strand, within Sama_2331 at 2797.536 kb on + strand, within Sama_2331 at 2797.545 kb on + strand, within Sama_2331 at 2797.545 kb on + strand, within Sama_2331 at 2797.546 kb on - strand, within Sama_2331 at 2797.584 kb on + strand, within Sama_2331 at 2797.585 kb on - strand, within Sama_2331 at 2797.590 kb on + strand, within Sama_2331 at 2797.591 kb on - strand, within Sama_2331 at 2797.630 kb on + strand, within Sama_2331 at 2797.630 kb on + strand, within Sama_2331 at 2797.630 kb on + strand, within Sama_2331 at 2797.668 kb on + strand, within Sama_2331 at 2797.668 kb on + strand, within Sama_2331 at 2797.668 kb on + strand, within Sama_2331 at 2797.668 kb on + strand, within Sama_2331 at 2797.699 kb on + strand, within Sama_2331 at 2797.699 kb on + strand, within Sama_2331 at 2797.700 kb on - strand, within Sama_2331 at 2797.700 kb on - strand, within Sama_2331 at 2797.700 kb on - strand, within Sama_2331 at 2797.700 kb on - strand, within Sama_2331 at 2797.717 kb on + strand, within Sama_2331 at 2797.894 kb on + strand, within Sama_2331 at 2797.894 kb on + strand, within Sama_2331 at 2797.894 kb on + strand, within Sama_2331 at 2797.895 kb on - strand, within Sama_2331 at 2797.898 kb on + strand, within Sama_2331 at 2797.898 kb on + strand, within Sama_2331 at 2797.898 kb on + strand, within Sama_2331 at 2797.899 kb on - strand, within Sama_2331 at 2797.899 kb on - strand, within Sama_2331 at 2797.899 kb on - strand, within Sama_2331 at 2797.900 kb on + strand, within Sama_2331 at 2797.900 kb on + strand, within Sama_2331 at 2797.901 kb on - strand, within Sama_2331 at 2797.930 kb on + strand, within Sama_2331 at 2797.930 kb on + strand, within Sama_2331 at 2797.986 kb on + strand at 2797.986 kb on + strand at 2798.034 kb on - strand at 2798.129 kb on + strand at 2798.129 kb on + strand at 2798.129 kb on + strand at 2798.129 kb on + strand at 2798.324 kb on + strand, within Sama_2332 at 2798.324 kb on + strand, within Sama_2332 at 2798.324 kb on + strand, within Sama_2332 at 2798.334 kb on - strand, within Sama_2332 at 2798.348 kb on - strand, within Sama_2332 at 2798.391 kb on - strand, within Sama_2332 at 2798.391 kb on - strand, within Sama_2332 at 2798.500 kb on + strand, within Sama_2332 at 2798.500 kb on + strand, within Sama_2332 at 2798.547 kb on + strand, within Sama_2332 at 2798.621 kb on + strand, within Sama_2332 at 2798.621 kb on + strand, within Sama_2332 at 2798.621 kb on + strand, within Sama_2332 at 2798.621 kb on + strand, within Sama_2332 at 2798.621 kb on + strand, within Sama_2332 at 2798.622 kb on - strand, within Sama_2332 at 2798.622 kb on - strand, within Sama_2332 at 2798.629 kb on - strand, within Sama_2332 at 2798.655 kb on + strand, within Sama_2332 at 2798.736 kb on - strand, within Sama_2332 at 2798.797 kb on - strand, within Sama_2332 at 2798.847 kb on + strand, within Sama_2332 at 2798.883 kb on - strand, within Sama_2332 at 2798.887 kb on + strand, within Sama_2332 at 2798.888 kb on - strand, within Sama_2332 at 2798.888 kb on - strand, within Sama_2332 at 2798.903 kb on + strand, within Sama_2332 at 2798.904 kb on - strand, within Sama_2332 at 2798.908 kb on - strand, within Sama_2332 at 2798.948 kb on + strand, within Sama_2332 at 2798.952 kb on + strand, within Sama_2332 at 2798.953 kb on - strand, within Sama_2332 at 2799.005 kb on + strand, within Sama_2332 at 2799.005 kb on + strand, within Sama_2332 at 2799.044 kb on + strand, within Sama_2332 at 2799.044 kb on + strand, within Sama_2332 at 2799.114 kb on + strand at 2799.160 kb on - strand at 2799.165 kb on - strand at 2799.165 kb on - strand at 2799.202 kb on + strand at 2799.231 kb on + strand at 2799.248 kb on + strand at 2799.249 kb on - strand at 2799.251 kb on + strand at 2799.302 kb on - strand, within Sama_2333 at 2799.310 kb on - strand, within Sama_2333 at 2799.310 kb on - strand, within Sama_2333 at 2799.427 kb on - strand, within Sama_2333 at 2799.459 kb on - strand, within Sama_2333 at 2799.507 kb on + strand, within Sama_2333 at 2799.532 kb on - strand, within Sama_2333 at 2799.568 kb on - strand, within Sama_2333 at 2799.705 kb on - strand, within Sama_2333 at 2799.765 kb on - strand, within Sama_2333 at 2799.898 kb on + strand, within Sama_2333 at 2799.940 kb on + strand, within Sama_2333 at 2799.941 kb on - strand, within Sama_2333 at 2799.941 kb on - strand, within Sama_2333 at 2800.028 kb on - strand, within Sama_2333 at 2800.031 kb on + strand, within Sama_2333 at 2800.060 kb on + strand, within Sama_2333 at 2800.077 kb on + strand at 2800.085 kb on - strand at 2800.089 kb on + strand at 2800.090 kb on - strand at 2800.096 kb on + strand at 2800.097 kb on - strand at 2800.132 kb on - strand at 2800.132 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,797,268 + Sama_2331 0.23 -0.7 2,797,280 - Sama_2331 0.24 +0.2 2,797,303 + Sama_2331 0.27 +1.7 2,797,426 - Sama_2331 0.39 +1.2 2,797,456 - Sama_2331 0.42 -0.3 2,797,456 - Sama_2331 0.42 +0.5 2,797,506 + Sama_2331 0.47 +0.2 2,797,536 + Sama_2331 0.50 +0.4 2,797,545 + Sama_2331 0.51 +0.2 2,797,545 + Sama_2331 0.51 -0.8 2,797,546 - Sama_2331 0.51 -1.2 2,797,584 + Sama_2331 0.55 +1.0 2,797,585 - Sama_2331 0.55 -0.4 2,797,590 + Sama_2331 0.55 -1.5 2,797,591 - Sama_2331 0.55 +1.3 2,797,630 + Sama_2331 0.59 +0.6 2,797,630 + Sama_2331 0.59 -1.0 2,797,630 + Sama_2331 0.59 -0.6 2,797,668 + Sama_2331 0.63 -1.1 2,797,668 + Sama_2331 0.63 -0.6 2,797,668 + Sama_2331 0.63 +1.6 2,797,668 + Sama_2331 0.63 +0.6 2,797,699 + Sama_2331 0.66 -1.5 2,797,699 + Sama_2331 0.66 +0.4 2,797,700 - Sama_2331 0.66 -0.2 2,797,700 - Sama_2331 0.66 -2.4 2,797,700 - Sama_2331 0.66 +0.0 2,797,700 - Sama_2331 0.66 -0.0 2,797,717 + Sama_2331 0.68 -0.3 2,797,894 + Sama_2331 0.86 +1.6 2,797,894 + Sama_2331 0.86 +1.4 2,797,894 + Sama_2331 0.86 -0.5 2,797,895 - Sama_2331 0.86 -0.6 2,797,898 + Sama_2331 0.86 +1.4 2,797,898 + Sama_2331 0.86 +2.4 2,797,898 + Sama_2331 0.86 -1.3 2,797,899 - Sama_2331 0.86 -1.4 2,797,899 - Sama_2331 0.86 +0.6 2,797,899 - Sama_2331 0.86 +1.3 2,797,900 + Sama_2331 0.86 -0.8 2,797,900 + Sama_2331 0.86 +0.9 2,797,901 - Sama_2331 0.86 -0.2 2,797,930 + Sama_2331 0.89 +0.7 2,797,930 + Sama_2331 0.89 +1.6 2,797,986 + +0.5 2,797,986 + -1.8 2,798,034 - -1.4 2,798,129 + -3.2 2,798,129 + -2.9 2,798,129 + -1.9 2,798,129 + -1.9 2,798,324 + Sama_2332 0.25 -1.6 2,798,324 + Sama_2332 0.25 -1.9 2,798,324 + Sama_2332 0.25 -3.3 2,798,334 - Sama_2332 0.26 -0.5 2,798,348 - Sama_2332 0.27 +0.4 2,798,391 - Sama_2332 0.31 -2.0 2,798,391 - Sama_2332 0.31 -0.0 2,798,500 + Sama_2332 0.40 -0.1 2,798,500 + Sama_2332 0.40 -2.3 2,798,547 + Sama_2332 0.44 -1.0 2,798,621 + Sama_2332 0.50 -2.9 2,798,621 + Sama_2332 0.50 -2.3 2,798,621 + Sama_2332 0.50 -3.2 2,798,621 + Sama_2332 0.50 -4.6 2,798,621 + Sama_2332 0.50 -2.6 2,798,622 - Sama_2332 0.50 -1.5 2,798,622 - Sama_2332 0.50 +0.4 2,798,629 - Sama_2332 0.51 -0.3 2,798,655 + Sama_2332 0.53 -3.6 2,798,736 - Sama_2332 0.60 -1.8 2,798,797 - Sama_2332 0.65 +0.1 2,798,847 + Sama_2332 0.70 -2.7 2,798,883 - Sama_2332 0.73 -0.6 2,798,887 + Sama_2332 0.73 -4.0 2,798,888 - Sama_2332 0.73 -1.5 2,798,888 - Sama_2332 0.73 -2.0 2,798,903 + Sama_2332 0.74 -4.1 2,798,904 - Sama_2332 0.74 -3.3 2,798,908 - Sama_2332 0.75 -1.3 2,798,948 + Sama_2332 0.78 -2.6 2,798,952 + Sama_2332 0.79 -1.5 2,798,953 - Sama_2332 0.79 -0.5 2,799,005 + Sama_2332 0.83 -1.5 2,799,005 + Sama_2332 0.83 -3.5 2,799,044 + Sama_2332 0.86 -1.4 2,799,044 + Sama_2332 0.86 -2.6 2,799,114 + -1.5 2,799,160 - +1.3 2,799,165 - -1.9 2,799,165 - -0.3 2,799,202 + -2.6 2,799,231 + +0.9 2,799,248 + +0.9 2,799,249 - -1.9 2,799,251 + -1.0 2,799,302 - Sama_2333 0.12 +0.2 2,799,310 - Sama_2333 0.13 +0.6 2,799,310 - Sama_2333 0.13 +0.7 2,799,427 - Sama_2333 0.25 +1.2 2,799,459 - Sama_2333 0.28 -2.0 2,799,507 + Sama_2333 0.33 -0.9 2,799,532 - Sama_2333 0.35 -0.0 2,799,568 - Sama_2333 0.39 +1.1 2,799,705 - Sama_2333 0.53 +1.9 2,799,765 - Sama_2333 0.59 +0.6 2,799,898 + Sama_2333 0.72 -1.6 2,799,940 + Sama_2333 0.77 -1.6 2,799,941 - Sama_2333 0.77 -0.3 2,799,941 - Sama_2333 0.77 +0.9 2,800,028 - Sama_2333 0.85 -0.1 2,800,031 + Sama_2333 0.86 +0.1 2,800,060 + Sama_2333 0.89 -1.6 2,800,077 + -1.2 2,800,085 - +1.2 2,800,089 + -0.6 2,800,090 - +1.7 2,800,096 + -1.2 2,800,097 - +0.1 2,800,132 - +0.2 2,800,132 - +0.6
Or see this region's nucleotide sequence