Strain Fitness in Shewanella amazonensis SB2B around Sama_1117

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
1,366,992	+		Sama_1116	0.19	+0.9
1,366,993	-		Sama_1116	0.19	-0.8
1,366,993	-		Sama_1116	0.19	+0.6
1,366,993	-		Sama_1116	0.19	+0.5
1,366,995	-		Sama_1116	0.19	-0.1
1,366,995	-		Sama_1116	0.19	+1.0
1,366,995	-		Sama_1116	0.19	+0.8
1,367,043	+		Sama_1116	0.25	+1.0
1,367,051	+		Sama_1116	0.26	-1.4
1,367,051	+		Sama_1116	0.26	+1.0
1,367,051	+		Sama_1116	0.26	+0.7
1,367,051	+		Sama_1116	0.26	+1.2
1,367,052	-		Sama_1116	0.26	-0.0
1,367,052	-		Sama_1116	0.26	-0.7
1,367,052	-		Sama_1116	0.26	-0.7
1,367,052	-		Sama_1116	0.26	+0.6
1,367,052	-		Sama_1116	0.26	+0.7
1,367,093	+		Sama_1116	0.31	+1.0
1,367,187	+		Sama_1116	0.42	+0.8
1,367,187	+		Sama_1116	0.42	+0.8
1,367,188	-		Sama_1116	0.42	-0.3
1,367,204	+		Sama_1116	0.44	+1.5
1,367,204	+		Sama_1116	0.44	+0.1
1,367,205	-		Sama_1116	0.45	-0.3
1,367,253	+		Sama_1116	0.50	-0.9
1,367,254	-		Sama_1116	0.51	+0.0
1,367,280	+		Sama_1116	0.54	+1.4
1,367,280	+		Sama_1116	0.54	+0.8
1,367,281	-		Sama_1116	0.54	+1.0
1,367,281	-		Sama_1116	0.54	-0.9
1,367,352	+		Sama_1116	0.63	-0.2
1,367,352	+		Sama_1116	0.63	+1.1
1,367,353	-		Sama_1116	0.63	+0.1
1,367,353	-		Sama_1116	0.63	+1.2
1,367,353	-		Sama_1116	0.63	+0.4
1,367,353	-		Sama_1116	0.63	-0.2
1,367,402	+		Sama_1116	0.69	-0.2
1,367,402	+		Sama_1116	0.69	+0.2
1,367,402	+		Sama_1116	0.69	+0.5
1,367,403	-		Sama_1116	0.69	+1.4
1,367,403	-		Sama_1116	0.69	+1.3
1,367,403	-		Sama_1116	0.69	-2.5
1,367,406	+		Sama_1116	0.69	+0.6
1,367,406	+		Sama_1116	0.69	-1.6
1,367,406	+		Sama_1116	0.69	+1.0
1,367,407	-		Sama_1116	0.69	-0.6
1,367,423	+		Sama_1116	0.71	+0.7
1,367,424	-		Sama_1116	0.71	-0.5
1,367,424	-		Sama_1116	0.71	+1.7
1,367,424	-		Sama_1116	0.71	+0.2
1,367,424	-		Sama_1116	0.71	+0.4
1,367,526	+		Sama_1116	0.84	+1.7
1,367,526	+		Sama_1116	0.84	+0.8
1,367,527	-		Sama_1116	0.84	-0.2
1,367,527	-		Sama_1116	0.84	+1.6
1,367,646	+				-0.4
1,367,681	+				+3.8
1,367,682	-				+0.7
1,367,682	-				+1.0
1,367,706	-				+0.1
1,367,783	-				-1.9
1,367,850	-				-0.9
1,367,869	+				+2.2
1,367,869	+				+1.2
1,367,869	+				-0.3
1,367,900	-				+2.9
1,367,916	-				-1.4
1,367,948	+				-1.2
1,367,948	+				+0.6
1,367,949	-				-1.9
1,367,956	+				+0.3
1,367,956	+				-0.8
1,367,978	+				-1.5
1,368,001	+		Sama_1117	0.14	+1.0
1,368,002	-		Sama_1117	0.15	-1.6
1,368,014	+		Sama_1117	0.18	+1.0
1,368,015	-		Sama_1117	0.18	-2.3
1,368,162	+		Sama_1117	0.59	+0.8
1,368,215	+		Sama_1117	0.74	+0.1
1,368,215	+		Sama_1117	0.74	+0.6
1,368,215	+		Sama_1117	0.74	-0.2
1,368,215	+		Sama_1117	0.74	-0.7
1,368,216	-		Sama_1117	0.74	-2.1
1,368,216	-		Sama_1117	0.74	-2.1
1,368,216	-		Sama_1117	0.74	-3.0
1,368,218	+		Sama_1117	0.75	+0.5
1,368,224	+		Sama_1117	0.76	+0.2
1,368,225	-		Sama_1117	0.77	-0.2
1,368,225	-		Sama_1117	0.77	-1.2
1,368,261	+		Sama_1117	0.87	+0.3
1,368,261	+		Sama_1117	0.87	-1.5
1,368,261	+		Sama_1117	0.87	-0.4
1,368,261	+		Sama_1117	0.87	+0.6
1,368,261	+		Sama_1117	0.87	-1.2
1,368,262	-		Sama_1117	0.87	-2.0
1,368,262	-		Sama_1117	0.87	-0.6
1,368,285	-				-1.0
1,368,306	+				-2.0
1,368,306	+				+1.6
1,368,307	-				-0.2
1,368,307	-				-0.4
1,368,314	+				-0.4
1,368,315	-				-0.2
1,368,377	+				-0.2
1,368,377	+				+0.3
1,368,377	+				-0.0
1,368,378	-				+2.1
1,368,378	-				+0.8
1,368,378	-				+1.1
1,368,380	-				+1.8
1,368,398	+				-0.2
1,368,398	+				+0.6
1,368,399	-				+0.6
1,368,399	-				-1.2
1,368,399	-				+1.3
1,368,486	-				-0.2
1,368,529	+				-0.1
1,368,529	+				+0.1
1,368,530	-				-0.9
1,368,530	-				-0.1
1,368,602	+				-0.9
1,368,602	+				+0.1
1,368,602	+				-0.4
1,368,603	-				+0.5
1,368,603	-				+2.4
1,368,603	-				+0.0
1,368,603	-				-1.7
1,368,603	-				-1.0
1,368,603	-				+0.8
1,368,603	-				-0.2
1,368,603	-				+1.6
1,368,629	-		Sama_1118	0.10	-2.1
1,368,629	-		Sama_1118	0.10	-1.5
1,368,656	+		Sama_1118	0.11	-1.2
1,368,662	+		Sama_1118	0.12	-0.6
1,368,663	-		Sama_1118	0.12	-2.2
1,368,700	+		Sama_1118	0.14	-1.0
1,368,700	+		Sama_1118	0.14	-2.4
1,368,701	-		Sama_1118	0.14	+0.6
1,368,715	+		Sama_1118	0.14	+0.2
1,368,725	-		Sama_1118	0.15	-0.3
1,368,755	-		Sama_1118	0.16	+0.5
1,368,765	-		Sama_1118	0.17	-0.4
1,368,812	+		Sama_1118	0.19	-1.3
1,368,812	+		Sama_1118	0.19	+1.4
1,368,812	+		Sama_1118	0.19	+0.6
1,368,812	+		Sama_1118	0.19	+0.0
1,368,812	+		Sama_1118	0.19	+1.5
1,368,812	+		Sama_1118	0.19	-0.9
1,368,812	+		Sama_1118	0.19	-0.2
1,368,812	+		Sama_1118	0.19	+0.1
1,368,813	-		Sama_1118	0.19	-0.7
1,368,813	-		Sama_1118	0.19	-0.4
1,368,813	-		Sama_1118	0.19	+0.0
1,368,813	-		Sama_1118	0.19	-0.3
1,368,846	-		Sama_1118	0.21	+1.2
1,368,860	+		Sama_1118	0.21	-0.4
1,368,861	-		Sama_1118	0.21	-1.4
1,368,945	+		Sama_1118	0.25	-1.2
1,368,945	+		Sama_1118	0.25	+0.2
1,368,946	-		Sama_1118	0.26	+0.9
1,368,946	-		Sama_1118	0.26	+0.4
1,369,054	-		Sama_1118	0.31	-0.3
1,369,136	+		Sama_1118	0.35	-0.5
1,369,136	+		Sama_1118	0.35	-1.4
1,369,136	+		Sama_1118	0.35	-3.0
1,369,136	+		Sama_1118	0.35	+0.1
1,369,136	+		Sama_1118	0.35	-0.0
1,369,145	+		Sama_1118	0.35	-1.1
1,369,196	+		Sama_1118	0.38	+0.1
1,369,196	+		Sama_1118	0.38	-1.2
1,369,197	-		Sama_1118	0.38	+1.3
1,369,197	-		Sama_1118	0.38	-1.6
1,369,238	+		Sama_1118	0.40	-1.5
1,369,238	+		Sama_1118	0.40	-0.3