Strain Fitness in Shewanella amazonensis SB2B around Sama_0914

Experiment: L-Arginine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arginine (N)
1,104,110	-				+0.4
1,104,110	-				-0.1
1,104,110	-				+1.2
1,104,163	-				-0.2
1,104,199	+				-1.0
1,104,211	+				+1.4
1,104,211	+				-1.1
1,104,211	+				+0.3
1,104,266	-				-1.1
1,104,410	-		Sama_0914	0.13	-1.4
1,104,410	-		Sama_0914	0.13	-0.9
1,104,469	+		Sama_0914	0.19	+0.5
1,104,470	-		Sama_0914	0.19	-1.0
1,104,470	-		Sama_0914	0.19	-1.7
1,104,539	-		Sama_0914	0.25	-0.2
1,104,539	-		Sama_0914	0.25	-2.4
1,104,539	-		Sama_0914	0.25	-1.3
1,104,539	-		Sama_0914	0.25	+0.3
1,104,539	-		Sama_0914	0.25	+0.1
1,104,539	-		Sama_0914	0.25	-1.4
1,104,566	-		Sama_0914	0.27	-2.2
1,104,644	-		Sama_0914	0.34	-1.6
1,104,644	-		Sama_0914	0.34	-0.7
1,104,644	-		Sama_0914	0.34	-0.5
1,104,658	+		Sama_0914	0.36	-0.2
1,104,659	-		Sama_0914	0.36	-0.3
1,104,715	-		Sama_0914	0.41	-0.6
1,104,794	-		Sama_0914	0.48	-2.7
1,104,815	-		Sama_0914	0.50	+0.3
1,104,897	-		Sama_0914	0.57	-3.6
1,104,909	-		Sama_0914	0.58	+0.6
1,104,909	-		Sama_0914	0.58	-0.8
1,104,911	-		Sama_0914	0.58	-1.3
1,104,928	-		Sama_0914	0.60	-1.4
1,104,928	-		Sama_0914	0.60	+1.9
1,104,956	-		Sama_0914	0.63	+0.2
1,104,956	-		Sama_0914	0.63	-2.0
1,104,959	-		Sama_0914	0.63	+2.0
1,104,959	-		Sama_0914	0.63	+0.7
1,104,959	-		Sama_0914	0.63	-1.1
1,104,959	-		Sama_0914	0.63	-0.2
1,104,963	-		Sama_0914	0.63	-1.8
1,104,963	-		Sama_0914	0.63	-2.0
1,104,963	-		Sama_0914	0.63	+0.0
1,104,963	-		Sama_0914	0.63	-1.2
1,104,963	-		Sama_0914	0.63	-1.1
1,104,986	-		Sama_0914	0.65	-0.3
1,104,995	-		Sama_0914	0.66	+0.5
1,104,995	-		Sama_0914	0.66	-0.7
1,104,995	-		Sama_0914	0.66	-0.8
1,104,995	-		Sama_0914	0.66	-0.8
1,104,995	-		Sama_0914	0.66	+0.9
1,105,084	-		Sama_0914	0.74	-3.0
1,105,084	-		Sama_0914	0.74	-0.8
1,105,106	-		Sama_0914	0.76	-1.6
1,105,160	-		Sama_0914	0.81	-0.3
1,105,167	-		Sama_0914	0.82	+0.2
1,105,175	-		Sama_0914	0.82	-1.7
1,105,186	-		Sama_0914	0.83	+1.3
1,105,186	-		Sama_0914	0.83	-1.2
1,105,199	-		Sama_0914	0.84	-1.3
1,105,199	-		Sama_0914	0.84	-2.5
1,105,199	-		Sama_0914	0.84	-1.2
1,105,199	-		Sama_0914	0.84	-0.5
1,105,199	-		Sama_0914	0.84	-0.7
1,105,252	+		Sama_0914	0.89	-2.7
1,105,252	+		Sama_0914	0.89	+1.0
1,105,253	-		Sama_0914	0.89	-1.3
1,105,253	-		Sama_0914	0.89	-2.0
1,105,253	-		Sama_0914	0.89	+1.1
1,105,253	-		Sama_0914	0.89	-2.9
1,105,253	-		Sama_0914	0.89	-1.5
1,105,253	-		Sama_0914	0.89	-2.5
1,105,253	-		Sama_0914	0.89	+0.9
1,105,253	-		Sama_0914	0.89	+1.2
1,105,263	-				-2.3
1,105,283	-				-2.5
1,105,283	-				-1.8
1,105,283	-				+0.5
1,105,370	+				-0.1
1,105,370	+				-0.1
1,105,371	-				+0.2
1,105,371	-				-2.0
1,105,406	+				-1.3
1,105,406	+				-0.7
1,105,407	-				+0.8
1,105,407	-				-1.3
1,105,407	-				+0.8
1,105,407	-				-1.0
1,105,431	+				-0.7
1,105,431	+				-0.0
1,105,432	-				-1.5
1,105,432	-				-1.2
1,105,432	-				+1.9
1,105,480	+				-2.0
1,105,480	+				-1.1
1,105,480	+				-2.1
1,105,480	+				-0.3
1,105,481	-				-1.3
1,105,481	-				-0.3
1,105,481	-				+0.2
1,105,481	-				-0.5
1,105,481	-				-1.1
1,105,481	-				-2.2
1,105,481	-				-0.7
1,105,484	-				-1.3
1,105,484	-				-1.2
1,105,497	-				-0.4
1,105,513	+				-0.3
1,105,514	-				-2.8
1,105,528	-				+1.0
1,105,532	-				+1.0
1,105,566	+				-1.5
1,105,628	+				+1.6
1,105,628	+				-1.9
1,105,629	-				+0.0
1,105,629	-				-1.0
1,105,629	-				-0.2
1,105,642	+				-0.8
1,105,643	-				-1.5
1,105,643	-				-1.7
1,105,645	+				-0.1
1,105,645	+				-0.9
1,105,645	+				+1.0
1,105,647	+				-0.3
1,105,647	+				-0.2
1,105,648	-				-1.1
1,105,655	-				-0.4
1,105,678	+				+1.6
1,105,678	+				-0.8
1,105,678	+				-0.3
1,105,679	-				+0.9
1,105,679	-				+0.3
1,105,735	+				-1.1
1,105,735	+				-0.3
1,105,735	+				-1.2
1,105,736	-				+1.7
1,105,736	-				-2.5
1,105,736	-				+1.7
1,105,737	+				-1.0
1,105,738	-				-0.1
1,105,744	+				+0.8
1,105,789	+				+0.4
1,105,825	-				-0.7
1,105,832	-		Sama_0915	0.10	-0.9
1,105,850	-		Sama_0915	0.11	-1.3
1,105,858	-		Sama_0915	0.11	-0.9
1,105,866	-		Sama_0915	0.12	-0.8
1,105,899	+		Sama_0915	0.13	-1.0
1,105,900	-		Sama_0915	0.13	+0.8
1,105,918	+		Sama_0915	0.14	-3.2
1,105,918	+		Sama_0915	0.14	-0.4
1,105,966	+		Sama_0915	0.16	-1.1
1,106,006	+		Sama_0915	0.18	-1.2
1,106,006	+		Sama_0915	0.18	+1.1
1,106,006	+		Sama_0915	0.18	+0.2
1,106,007	-		Sama_0915	0.18	-3.2
1,106,007	-		Sama_0915	0.18	-0.8
1,106,007	-		Sama_0915	0.18	-1.9
1,106,015	+		Sama_0915	0.18	+0.9
1,106,016	-		Sama_0915	0.18	+0.3
1,106,016	-		Sama_0915	0.18	+0.1
1,106,016	-		Sama_0915	0.18	+0.1
1,106,062	+		Sama_0915	0.20	+0.3
1,106,063	-		Sama_0915	0.20	+0.8
1,106,063	-		Sama_0915	0.20	-0.6
1,106,080	-		Sama_0915	0.21	-1.0
1,106,099	+		Sama_0915	0.22	-0.3
1,106,099	+		Sama_0915	0.22	-1.0
1,106,203	+		Sama_0915	0.26	-1.0
1,106,203	+		Sama_0915	0.26	-1.0
1,106,203	+		Sama_0915	0.26	-1.0
1,106,204	-		Sama_0915	0.26	-0.3
1,106,242	-		Sama_0915	0.28	+0.3
1,106,254	+		Sama_0915	0.28	+1.1
1,106,256	+		Sama_0915	0.28	+1.7
1,106,257	-		Sama_0915	0.28	+0.5
1,106,356	-		Sama_0915	0.32	+1.4