Experiment: m.b. Benzalkonium Chloride 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_915 and HP15_916 are separated by 32 nucleotides HP15_916 and HP15_917 are separated by 38 nucleotides
HP15_915: HP15_915 - secreted protein containing sulphatase-modifying factor domain, at 928,655 to 929,614
_915
HP15_916: HP15_916 - membrane protein, at 929,647 to 930,522
_916
HP15_917: HP15_917 - hypothetical protein, at 930,561 to 930,668
_917
Position (kb) 929
930
931 Strain fitness (log2 ratio) -1
0
1
2
3 at 928.666 kb on + strand at 928.839 kb on - strand, within HP15_915 at 929.142 kb on - strand, within HP15_915 at 929.184 kb on - strand, within HP15_915 at 929.235 kb on + strand, within HP15_915 at 929.348 kb on - strand, within HP15_915 at 929.446 kb on - strand, within HP15_915 at 929.649 kb on - strand at 929.869 kb on - strand, within HP15_916 at 930.118 kb on - strand, within HP15_916 at 930.163 kb on + strand, within HP15_916 at 930.163 kb on + strand, within HP15_916 at 930.183 kb on + strand, within HP15_916 at 930.276 kb on + strand, within HP15_916 at 930.351 kb on - strand, within HP15_916 at 930.450 kb on + strand at 930.471 kb on - strand at 930.574 kb on - strand, within HP15_917 at 930.599 kb on - strand, within HP15_917 at 930.614 kb on - strand, within HP15_917 at 930.727 kb on - strand at 930.807 kb on - strand at 930.808 kb on + strand at 930.808 kb on + strand at 930.869 kb on - strand at 930.907 kb on - strand at 930.909 kb on + strand at 930.938 kb on - strand at 930.963 kb on + strand at 930.989 kb on + strand at 931.094 kb on - strand at 931.123 kb on + strand at 931.169 kb on + strand at 931.210 kb on - strand at 931.329 kb on + strand at 931.338 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.001 mg/ml remove 928,666 + +0.6 928,839 - HP15_915 0.19 -0.2 929,142 - HP15_915 0.51 -0.1 929,184 - HP15_915 0.55 -0.1 929,235 + HP15_915 0.60 +0.6 929,348 - HP15_915 0.72 -0.2 929,446 - HP15_915 0.82 +1.1 929,649 - -0.4 929,869 - HP15_916 0.25 +2.4 930,118 - HP15_916 0.54 +0.4 930,163 + HP15_916 0.59 -1.0 930,163 + HP15_916 0.59 +0.5 930,183 + HP15_916 0.61 +0.6 930,276 + HP15_916 0.72 +1.2 930,351 - HP15_916 0.80 +1.0 930,450 + -1.4 930,471 - +2.9 930,574 - HP15_917 0.12 +0.3 930,599 - HP15_917 0.35 +0.2 930,614 - HP15_917 0.49 +0.4 930,727 - +1.0 930,807 - -0.1 930,808 + +0.2 930,808 + +0.4 930,869 - -0.4 930,907 - -1.7 930,909 + +0.3 930,938 - -0.6 930,963 + -0.8 930,989 + -0.4 931,094 - +0.5 931,123 + +1.2 931,169 + -0.1 931,210 - -0.7 931,329 + -0.2 931,338 - -1.5
Or see this region's nucleotide sequence