Experiment: m.b. Benzalkonium Chloride 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_715 and HP15_716 are separated by 165 nucleotides HP15_716 and HP15_717 are separated by 51 nucleotides HP15_717 and HP15_718 are separated by 40 nucleotides
HP15_715: HP15_715 - deoxyribodipyrimidine photolyase, at 723,940 to 725,343
_715
HP15_716: HP15_716 - conserved hypothetical protein, at 725,509 to 726,318
_716
HP15_717: HP15_717 - MscS Mechanosensitive ion channel, at 726,370 to 727,230
_717
HP15_718: HP15_718 - ribosomal protein S6 modification protein-like protein, at 727,271 to 727,708
_718
Position (kb) 725
726
727 Strain fitness (log2 ratio) -2
-1
0
1 at 724.636 kb on - strand, within HP15_715 at 724.712 kb on + strand, within HP15_715 at 724.758 kb on - strand, within HP15_715 at 724.760 kb on - strand, within HP15_715 at 724.794 kb on + strand, within HP15_715 at 724.808 kb on + strand, within HP15_715 at 724.816 kb on - strand, within HP15_715 at 724.898 kb on + strand, within HP15_715 at 724.906 kb on - strand, within HP15_715 at 724.922 kb on - strand, within HP15_715 at 724.997 kb on + strand, within HP15_715 at 725.003 kb on - strand, within HP15_715 at 725.022 kb on + strand, within HP15_715 at 725.022 kb on + strand, within HP15_715 at 725.030 kb on + strand, within HP15_715 at 725.042 kb on + strand, within HP15_715 at 725.055 kb on - strand, within HP15_715 at 725.097 kb on + strand, within HP15_715 at 725.129 kb on - strand, within HP15_715 at 725.156 kb on + strand, within HP15_715 at 725.176 kb on - strand, within HP15_715 at 725.176 kb on - strand, within HP15_715 at 725.259 kb on + strand at 725.468 kb on - strand at 725.548 kb on - strand at 725.553 kb on + strand at 725.561 kb on - strand at 725.575 kb on - strand at 725.595 kb on + strand, within HP15_716 at 725.643 kb on - strand, within HP15_716 at 725.709 kb on + strand, within HP15_716 at 725.868 kb on + strand, within HP15_716 at 725.880 kb on + strand, within HP15_716 at 725.984 kb on - strand, within HP15_716 at 726.080 kb on - strand, within HP15_716 at 726.147 kb on + strand, within HP15_716 at 726.155 kb on - strand, within HP15_716 at 726.155 kb on - strand, within HP15_716 at 726.155 kb on - strand, within HP15_716 at 726.155 kb on - strand, within HP15_716 at 726.499 kb on - strand, within HP15_717 at 726.648 kb on - strand, within HP15_717 at 726.683 kb on - strand, within HP15_717 at 726.727 kb on - strand, within HP15_717 at 726.757 kb on - strand, within HP15_717 at 726.762 kb on - strand, within HP15_717 at 726.809 kb on + strand, within HP15_717 at 726.824 kb on + strand, within HP15_717 at 726.832 kb on - strand, within HP15_717 at 726.832 kb on - strand, within HP15_717 at 726.871 kb on - strand, within HP15_717 at 726.875 kb on - strand, within HP15_717 at 726.891 kb on + strand, within HP15_717 at 726.909 kb on + strand, within HP15_717 at 726.971 kb on - strand, within HP15_717 at 727.156 kb on - strand at 727.166 kb on - strand at 727.293 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.001 mg/ml remove 724,636 - HP15_715 0.50 -0.5 724,712 + HP15_715 0.55 -0.2 724,758 - HP15_715 0.58 +0.1 724,760 - HP15_715 0.58 -0.9 724,794 + HP15_715 0.61 +0.2 724,808 + HP15_715 0.62 -2.3 724,816 - HP15_715 0.62 +0.1 724,898 + HP15_715 0.68 +0.9 724,906 - HP15_715 0.69 -0.1 724,922 - HP15_715 0.70 -0.6 724,997 + HP15_715 0.75 -1.5 725,003 - HP15_715 0.76 +1.6 725,022 + HP15_715 0.77 -0.3 725,022 + HP15_715 0.77 +1.0 725,030 + HP15_715 0.78 -1.1 725,042 + HP15_715 0.78 -1.0 725,055 - HP15_715 0.79 +0.2 725,097 + HP15_715 0.82 +0.4 725,129 - HP15_715 0.85 +0.3 725,156 + HP15_715 0.87 +0.7 725,176 - HP15_715 0.88 -0.3 725,176 - HP15_715 0.88 -0.8 725,259 + +0.8 725,468 - -1.6 725,548 - +0.3 725,553 + -0.1 725,561 - -0.8 725,575 - +1.3 725,595 + HP15_716 0.11 -0.2 725,643 - HP15_716 0.17 +1.1 725,709 + HP15_716 0.25 +0.8 725,868 + HP15_716 0.44 +1.0 725,880 + HP15_716 0.46 +0.7 725,984 - HP15_716 0.59 -0.2 726,080 - HP15_716 0.70 +0.7 726,147 + HP15_716 0.79 +1.1 726,155 - HP15_716 0.80 -2.4 726,155 - HP15_716 0.80 +0.6 726,155 - HP15_716 0.80 -0.0 726,155 - HP15_716 0.80 +1.3 726,499 - HP15_717 0.15 -0.4 726,648 - HP15_717 0.32 +0.3 726,683 - HP15_717 0.36 +1.2 726,727 - HP15_717 0.41 -0.3 726,757 - HP15_717 0.45 -0.1 726,762 - HP15_717 0.46 +0.7 726,809 + HP15_717 0.51 -0.5 726,824 + HP15_717 0.53 +0.2 726,832 - HP15_717 0.54 -0.5 726,832 - HP15_717 0.54 -0.2 726,871 - HP15_717 0.58 +0.3 726,875 - HP15_717 0.59 -2.2 726,891 + HP15_717 0.61 -0.5 726,909 + HP15_717 0.63 +0.2 726,971 - HP15_717 0.70 +0.2 727,156 - -0.0 727,166 - +0.4 727,293 + -2.5
Or see this region's nucleotide sequence