Experiment: m.b. Benzalkonium Chloride 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_p187g81 and HP15_p187g82 are separated by 260 nucleotides HP15_p187g82 and HP15_p187g83 are separated by 100 nucleotides
HP15_p187g81: HP15_p187g81 - secreted protein containing outer membrane protein, OmpA/MotB, C-terminal domain, at 78,276 to 79,376
_p187g81
HP15_p187g82: HP15_p187g82 - uncharacterized conserved protein, at 79,637 to 80,476
_p187g82
HP15_p187g83: HP15_p187g83 - conserved hypothetical protein, membrane, at 80,577 to 81,798
_p187g83
Position (kb) 79
80
81 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 78.679 kb on + strand, within HP15_p187g81 at 78.682 kb on - strand, within HP15_p187g81 at 78.682 kb on - strand, within HP15_p187g81 at 78.736 kb on - strand, within HP15_p187g81 at 78.778 kb on + strand, within HP15_p187g81 at 78.778 kb on + strand, within HP15_p187g81 at 78.778 kb on + strand, within HP15_p187g81 at 78.778 kb on + strand, within HP15_p187g81 at 78.783 kb on + strand, within HP15_p187g81 at 78.786 kb on - strand, within HP15_p187g81 at 78.786 kb on - strand, within HP15_p187g81 at 78.786 kb on - strand, within HP15_p187g81 at 78.855 kb on + strand, within HP15_p187g81 at 78.863 kb on - strand, within HP15_p187g81 at 78.868 kb on + strand, within HP15_p187g81 at 78.868 kb on + strand, within HP15_p187g81 at 78.868 kb on + strand, within HP15_p187g81 at 78.876 kb on - strand, within HP15_p187g81 at 78.876 kb on - strand, within HP15_p187g81 at 78.876 kb on - strand, within HP15_p187g81 at 78.876 kb on - strand, within HP15_p187g81 at 78.981 kb on - strand, within HP15_p187g81 at 78.989 kb on + strand, within HP15_p187g81 at 79.006 kb on + strand, within HP15_p187g81 at 79.011 kb on + strand, within HP15_p187g81 at 79.011 kb on + strand, within HP15_p187g81 at 79.011 kb on + strand, within HP15_p187g81 at 79.011 kb on + strand, within HP15_p187g81 at 79.019 kb on - strand, within HP15_p187g81 at 79.019 kb on - strand, within HP15_p187g81 at 79.019 kb on - strand, within HP15_p187g81 at 79.019 kb on - strand, within HP15_p187g81 at 79.065 kb on + strand, within HP15_p187g81 at 79.073 kb on - strand, within HP15_p187g81 at 79.095 kb on - strand, within HP15_p187g81 at 79.146 kb on - strand, within HP15_p187g81 at 79.151 kb on + strand, within HP15_p187g81 at 79.152 kb on - strand, within HP15_p187g81 at 79.156 kb on + strand, within HP15_p187g81 at 79.159 kb on - strand, within HP15_p187g81 at 79.164 kb on - strand, within HP15_p187g81 at 79.196 kb on - strand, within HP15_p187g81 at 79.196 kb on - strand, within HP15_p187g81 at 79.226 kb on - strand, within HP15_p187g81 at 79.267 kb on - strand at 79.271 kb on + strand at 79.271 kb on + strand at 79.272 kb on - strand at 79.277 kb on - strand at 79.291 kb on - strand at 79.305 kb on + strand at 79.318 kb on + strand at 79.366 kb on + strand at 79.473 kb on - strand at 79.503 kb on + strand at 79.513 kb on + strand at 79.513 kb on + strand at 79.521 kb on - strand at 79.521 kb on - strand at 79.535 kb on + strand at 79.552 kb on + strand at 79.557 kb on - strand at 79.580 kb on + strand at 79.582 kb on + strand at 79.582 kb on + strand at 79.582 kb on - strand at 79.616 kb on + strand at 79.621 kb on + strand at 79.624 kb on - strand at 79.624 kb on - strand at 79.627 kb on - strand at 79.663 kb on - strand at 79.663 kb on - strand at 79.708 kb on + strand at 79.708 kb on + strand at 79.708 kb on + strand at 79.708 kb on + strand at 79.708 kb on + strand at 79.716 kb on - strand at 79.716 kb on - strand at 79.716 kb on - strand at 79.716 kb on - strand at 79.716 kb on - strand at 79.716 kb on - strand at 79.810 kb on + strand, within HP15_p187g82 at 79.818 kb on - strand, within HP15_p187g82 at 79.818 kb on - strand, within HP15_p187g82 at 79.818 kb on - strand, within HP15_p187g82 at 79.825 kb on - strand, within HP15_p187g82 at 79.826 kb on + strand, within HP15_p187g82 at 79.827 kb on + strand, within HP15_p187g82 at 79.886 kb on + strand, within HP15_p187g82 at 79.888 kb on + strand, within HP15_p187g82 at 79.888 kb on + strand, within HP15_p187g82 at 79.888 kb on + strand, within HP15_p187g82 at 79.939 kb on - strand, within HP15_p187g82 at 79.961 kb on + strand, within HP15_p187g82 at 80.014 kb on - strand, within HP15_p187g82 at 80.035 kb on + strand, within HP15_p187g82 at 80.035 kb on + strand, within HP15_p187g82 at 80.052 kb on + strand, within HP15_p187g82 at 80.055 kb on - strand, within HP15_p187g82 at 80.057 kb on - strand, within HP15_p187g82 at 80.096 kb on - strand, within HP15_p187g82 at 80.096 kb on - strand, within HP15_p187g82 at 80.096 kb on - strand, within HP15_p187g82 at 80.096 kb on - strand, within HP15_p187g82 at 80.096 kb on - strand, within HP15_p187g82 at 80.096 kb on - strand, within HP15_p187g82 at 80.096 kb on - strand, within HP15_p187g82 at 80.130 kb on - strand, within HP15_p187g82 at 80.158 kb on - strand, within HP15_p187g82 at 80.174 kb on - strand, within HP15_p187g82 at 80.176 kb on + strand, within HP15_p187g82 at 80.181 kb on + strand, within HP15_p187g82 at 80.225 kb on + strand, within HP15_p187g82 at 80.242 kb on + strand, within HP15_p187g82 at 80.242 kb on + strand, within HP15_p187g82 at 80.245 kb on - strand, within HP15_p187g82 at 80.245 kb on - strand, within HP15_p187g82 at 80.341 kb on + strand, within HP15_p187g82 at 80.421 kb on + strand at 80.422 kb on - strand at 80.453 kb on + strand at 80.453 kb on + strand at 80.470 kb on + strand at 80.483 kb on - strand at 80.523 kb on - strand at 80.533 kb on - strand at 80.621 kb on + strand at 80.629 kb on - strand at 80.637 kb on + strand at 80.673 kb on + strand at 80.688 kb on - strand at 80.725 kb on + strand, within HP15_p187g83 at 80.736 kb on + strand, within HP15_p187g83 at 80.744 kb on - strand, within HP15_p187g83 at 80.774 kb on - strand, within HP15_p187g83 at 80.816 kb on + strand, within HP15_p187g83 at 80.825 kb on + strand, within HP15_p187g83 at 80.860 kb on - strand, within HP15_p187g83 at 80.871 kb on - strand, within HP15_p187g83 at 80.886 kb on - strand, within HP15_p187g83 at 80.895 kb on + strand, within HP15_p187g83 at 80.900 kb on + strand, within HP15_p187g83 at 80.903 kb on - strand, within HP15_p187g83 at 80.920 kb on + strand, within HP15_p187g83 at 80.938 kb on - strand, within HP15_p187g83 at 81.001 kb on + strand, within HP15_p187g83 at 81.003 kb on + strand, within HP15_p187g83 at 81.042 kb on - strand, within HP15_p187g83 at 81.053 kb on - strand, within HP15_p187g83 at 81.063 kb on + strand, within HP15_p187g83 at 81.070 kb on + strand, within HP15_p187g83 at 81.070 kb on + strand, within HP15_p187g83 at 81.070 kb on + strand, within HP15_p187g83 at 81.070 kb on + strand, within HP15_p187g83 at 81.078 kb on - strand, within HP15_p187g83 at 81.078 kb on - strand, within HP15_p187g83 at 81.086 kb on + strand, within HP15_p187g83 at 81.094 kb on - strand, within HP15_p187g83 at 81.106 kb on + strand, within HP15_p187g83 at 81.137 kb on + strand, within HP15_p187g83 at 81.137 kb on + strand, within HP15_p187g83 at 81.229 kb on - strand, within HP15_p187g83 at 81.272 kb on + strand, within HP15_p187g83 at 81.280 kb on - strand, within HP15_p187g83 at 81.287 kb on + strand, within HP15_p187g83 at 81.295 kb on - strand, within HP15_p187g83 at 81.311 kb on - strand, within HP15_p187g83 at 81.329 kb on + strand, within HP15_p187g83 at 81.362 kb on + strand, within HP15_p187g83 at 81.454 kb on + strand, within HP15_p187g83 at 81.455 kb on + strand, within HP15_p187g83 at 81.463 kb on - strand, within HP15_p187g83 at 81.463 kb on - strand, within HP15_p187g83 at 81.465 kb on + strand, within HP15_p187g83
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.001 mg/ml remove 78,679 + HP15_p187g81 0.37 +3.9 78,682 - HP15_p187g81 0.37 -0.4 78,682 - HP15_p187g81 0.37 +0.4 78,736 - HP15_p187g81 0.42 -0.1 78,778 + HP15_p187g81 0.46 +0.0 78,778 + HP15_p187g81 0.46 +1.1 78,778 + HP15_p187g81 0.46 +0.7 78,778 + HP15_p187g81 0.46 -0.5 78,783 + HP15_p187g81 0.46 -0.7 78,786 - HP15_p187g81 0.46 -0.7 78,786 - HP15_p187g81 0.46 -0.6 78,786 - HP15_p187g81 0.46 -0.5 78,855 + HP15_p187g81 0.53 -0.2 78,863 - HP15_p187g81 0.53 +0.1 78,868 + HP15_p187g81 0.54 +0.3 78,868 + HP15_p187g81 0.54 +0.1 78,868 + HP15_p187g81 0.54 -2.0 78,876 - HP15_p187g81 0.54 +0.1 78,876 - HP15_p187g81 0.54 -0.3 78,876 - HP15_p187g81 0.54 +0.3 78,876 - HP15_p187g81 0.54 -1.9 78,981 - HP15_p187g81 0.64 -0.4 78,989 + HP15_p187g81 0.65 +0.1 79,006 + HP15_p187g81 0.66 +1.3 79,011 + HP15_p187g81 0.67 -0.2 79,011 + HP15_p187g81 0.67 -0.8 79,011 + HP15_p187g81 0.67 +0.6 79,011 + HP15_p187g81 0.67 +0.2 79,019 - HP15_p187g81 0.67 +0.6 79,019 - HP15_p187g81 0.67 +1.7 79,019 - HP15_p187g81 0.67 -0.2 79,019 - HP15_p187g81 0.67 +0.4 79,065 + HP15_p187g81 0.72 -1.9 79,073 - HP15_p187g81 0.72 +1.3 79,095 - HP15_p187g81 0.74 +0.1 79,146 - HP15_p187g81 0.79 -1.4 79,151 + HP15_p187g81 0.79 +0.1 79,152 - HP15_p187g81 0.80 +0.1 79,156 + HP15_p187g81 0.80 -0.2 79,159 - HP15_p187g81 0.80 -0.2 79,164 - HP15_p187g81 0.81 -0.4 79,196 - HP15_p187g81 0.84 -0.5 79,196 - HP15_p187g81 0.84 +1.2 79,226 - HP15_p187g81 0.86 -0.0 79,267 - -0.2 79,271 + -0.6 79,271 + -1.6 79,272 - -0.1 79,277 - +0.4 79,291 - -0.5 79,305 + +0.3 79,318 + -0.4 79,366 + -0.5 79,473 - -1.1 79,503 + +1.7 79,513 + -1.0 79,513 + -0.0 79,521 - +1.1 79,521 - +1.3 79,535 + -0.3 79,552 + -0.2 79,557 - +0.8 79,580 + -0.0 79,582 + -0.0 79,582 + +1.3 79,582 - +0.3 79,616 + -0.2 79,621 + -0.5 79,624 - -0.3 79,624 - -1.3 79,627 - -0.6 79,663 - +1.3 79,663 - -0.0 79,708 + +0.3 79,708 + +1.1 79,708 + -1.3 79,708 + -0.1 79,708 + -0.1 79,716 - +0.5 79,716 - -0.1 79,716 - -1.0 79,716 - -2.1 79,716 - -0.1 79,716 - +0.4 79,810 + HP15_p187g82 0.21 -1.0 79,818 - HP15_p187g82 0.22 +1.7 79,818 - HP15_p187g82 0.22 -0.9 79,818 - HP15_p187g82 0.22 -1.1 79,825 - HP15_p187g82 0.22 +1.1 79,826 + HP15_p187g82 0.23 +1.1 79,827 + HP15_p187g82 0.23 +1.6 79,886 + HP15_p187g82 0.30 -0.3 79,888 + HP15_p187g82 0.30 -0.9 79,888 + HP15_p187g82 0.30 +0.3 79,888 + HP15_p187g82 0.30 -0.8 79,939 - HP15_p187g82 0.36 -0.1 79,961 + HP15_p187g82 0.39 +0.9 80,014 - HP15_p187g82 0.45 +2.9 80,035 + HP15_p187g82 0.47 +0.4 80,035 + HP15_p187g82 0.47 +0.6 80,052 + HP15_p187g82 0.49 +0.6 80,055 - HP15_p187g82 0.50 -0.5 80,057 - HP15_p187g82 0.50 -1.2 80,096 - HP15_p187g82 0.55 -0.1 80,096 - HP15_p187g82 0.55 +1.2 80,096 - HP15_p187g82 0.55 +0.4 80,096 - HP15_p187g82 0.55 -0.9 80,096 - HP15_p187g82 0.55 -1.5 80,096 - HP15_p187g82 0.55 +0.7 80,096 - HP15_p187g82 0.55 +1.5 80,130 - HP15_p187g82 0.59 -0.5 80,158 - HP15_p187g82 0.62 -1.5 80,174 - HP15_p187g82 0.64 +0.3 80,176 + HP15_p187g82 0.64 +0.0 80,181 + HP15_p187g82 0.65 -0.5 80,225 + HP15_p187g82 0.70 +0.6 80,242 + HP15_p187g82 0.72 -0.3 80,242 + HP15_p187g82 0.72 -0.5 80,245 - HP15_p187g82 0.72 -0.0 80,245 - HP15_p187g82 0.72 -0.5 80,341 + HP15_p187g82 0.84 +1.3 80,421 + +0.1 80,422 - +0.8 80,453 + -0.6 80,453 + -1.1 80,470 + -0.4 80,483 - -0.5 80,523 - -0.1 80,533 - -0.1 80,621 + +0.2 80,629 - -0.5 80,637 + -1.8 80,673 + +2.6 80,688 - -0.9 80,725 + HP15_p187g83 0.12 +0.9 80,736 + HP15_p187g83 0.13 -0.5 80,744 - HP15_p187g83 0.14 +0.2 80,774 - HP15_p187g83 0.16 +0.6 80,816 + HP15_p187g83 0.20 -0.5 80,825 + HP15_p187g83 0.20 -0.7 80,860 - HP15_p187g83 0.23 +1.5 80,871 - HP15_p187g83 0.24 -0.0 80,886 - HP15_p187g83 0.25 +0.7 80,895 + HP15_p187g83 0.26 -0.6 80,900 + HP15_p187g83 0.26 +1.4 80,903 - HP15_p187g83 0.27 +1.1 80,920 + HP15_p187g83 0.28 -0.9 80,938 - HP15_p187g83 0.30 -0.4 81,001 + HP15_p187g83 0.35 -0.0 81,003 + HP15_p187g83 0.35 -0.5 81,042 - HP15_p187g83 0.38 -0.5 81,053 - HP15_p187g83 0.39 -2.7 81,063 + HP15_p187g83 0.40 -0.7 81,070 + HP15_p187g83 0.40 +0.5 81,070 + HP15_p187g83 0.40 +1.4 81,070 + HP15_p187g83 0.40 +2.9 81,070 + HP15_p187g83 0.40 -0.7 81,078 - HP15_p187g83 0.41 +0.9 81,078 - HP15_p187g83 0.41 -0.0 81,086 + HP15_p187g83 0.42 -0.6 81,094 - HP15_p187g83 0.42 +0.9 81,106 + HP15_p187g83 0.43 +2.1 81,137 + HP15_p187g83 0.46 -1.1 81,137 + HP15_p187g83 0.46 +0.3 81,229 - HP15_p187g83 0.53 +0.4 81,272 + HP15_p187g83 0.57 +0.1 81,280 - HP15_p187g83 0.58 -0.7 81,287 + HP15_p187g83 0.58 +0.6 81,295 - HP15_p187g83 0.59 +1.5 81,311 - HP15_p187g83 0.60 -0.0 81,329 + HP15_p187g83 0.62 -2.0 81,362 + HP15_p187g83 0.64 +2.2 81,454 + HP15_p187g83 0.72 -0.7 81,455 + HP15_p187g83 0.72 +1.9 81,463 - HP15_p187g83 0.73 +0.2 81,463 - HP15_p187g83 0.73 -0.0 81,465 + HP15_p187g83 0.73 +0.1
Or see this region's nucleotide sequence