Experiment: m.b. Benzalkonium Chloride 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3519 and HP15_3520 are separated by 11 nucleotides HP15_3520 and HP15_3521 are separated by 73 nucleotides HP15_3521 and HP15_3522 overlap by 8 nucleotides HP15_3522 and HP15_3523 overlap by 14 nucleotides
HP15_3519: HP15_3519 - CheB methylesterase, at 3,708,128 to 3,709,180
_3519
HP15_3520: HP15_3520 - protein containing CheW-like domain, at 3,709,192 to 3,709,653
_3520
HP15_3521: HP15_3521 - zinc uptake regulation protein, at 3,709,727 to 3,710,218
_3521
HP15_3522: HP15_3522 - zinc import ATP-binding protein znuC, at 3,710,211 to 3,710,978
_3522
HP15_3523: HP15_3523 - zinc ABC transporter, permease protein, at 3,710,965 to 3,711,777
_3523
Position (kb)
3709
3710
3711 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3708.788 kb on - strand, within HP15_3519 at 3708.873 kb on + strand, within HP15_3519 at 3708.918 kb on + strand, within HP15_3519 at 3708.926 kb on - strand, within HP15_3519 at 3709.022 kb on - strand, within HP15_3519 at 3709.203 kb on + strand at 3709.257 kb on + strand, within HP15_3520 at 3709.499 kb on + strand, within HP15_3520 at 3709.932 kb on - strand, within HP15_3521 at 3710.097 kb on + strand, within HP15_3521 at 3710.097 kb on + strand, within HP15_3521 at 3710.105 kb on - strand, within HP15_3521 at 3710.105 kb on - strand, within HP15_3521 at 3710.109 kb on + strand, within HP15_3521 at 3710.759 kb on + strand, within HP15_3522 at 3710.914 kb on + strand at 3710.922 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.001 mg/ml remove 3,708,788 - HP15_3519 0.63 +0.4 3,708,873 + HP15_3519 0.71 -0.5 3,708,918 + HP15_3519 0.75 +0.4 3,708,926 - HP15_3519 0.76 +0.5 3,709,022 - HP15_3519 0.85 -0.6 3,709,203 + -1.1 3,709,257 + HP15_3520 0.14 -0.5 3,709,499 + HP15_3520 0.66 +0.4 3,709,932 - HP15_3521 0.42 +1.0 3,710,097 + HP15_3521 0.75 -1.4 3,710,097 + HP15_3521 0.75 -1.0 3,710,105 - HP15_3521 0.77 -2.4 3,710,105 - HP15_3521 0.77 -2.9 3,710,109 + HP15_3521 0.78 -3.9 3,710,759 + HP15_3522 0.71 -1.0 3,710,914 + -0.5 3,710,922 - -1.3
Or see this region's nucleotide sequence