Strain Fitness in Marinobacter adhaerens HP15 around HP15_3229
Experiment: m.b. Benzalkonium Chloride 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,382,083 | + | +0.4 | |||
3,382,083 | + | -0.8 | |||
3,382,091 | - | +0.1 | |||
3,382,269 | + | -0.8 | |||
3,382,274 | + | -0.7 | |||
3,382,297 | + | +0.3 | |||
3,382,310 | - | HP15_3229 | 0.11 | +0.9 | |
3,382,614 | - | HP15_3229 | 0.44 | +0.4 | |
3,382,755 | - | HP15_3229 | 0.59 | -0.7 | |
3,382,977 | - | HP15_3229 | 0.82 | -1.3 | |
3,383,067 | - | -1.3 | |||
3,383,073 | + | +0.3 | |||
3,383,134 | + | -0.3 | |||
3,383,203 | - | HP15_3230 | 0.53 | +0.7 | |
3,383,205 | + | HP15_3230 | 0.54 | -0.0 | |
3,383,208 | - | HP15_3230 | 0.57 | +0.3 | |
3,383,274 | + | +0.2 | |||
3,383,403 | + | +2.2 | |||
3,383,405 | + | -0.1 | |||
3,383,405 | + | -1.1 | |||
3,383,430 | - | HP15_3231 | 0.11 | -1.0 | |
3,383,492 | - | HP15_3231 | 0.15 | -0.1 | |
3,383,515 | + | HP15_3231 | 0.17 | -0.1 | |
3,383,519 | + | HP15_3231 | 0.17 | +0.0 | |
3,383,712 | - | HP15_3231 | 0.29 | -0.4 | |
3,383,798 | + | HP15_3231 | 0.35 | +2.2 |
Or see this region's nucleotide sequence