Experiment: m.b. Benzalkonium Chloride 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2556 and HP15_2557 are separated by 94 nucleotides HP15_2557 and HP15_2558 overlap by 23 nucleotides HP15_2558 and HP15_2559 are separated by 13 nucleotides
HP15_2556: HP15_2556 - lysophospholipase, at 2,702,682 to 2,703,689
_2556
HP15_2557: HP15_2557 - alpha/beta hydrolase fold-3 domain protein, at 2,703,784 to 2,704,677
_2557
HP15_2558: HP15_2558 - putative nuclease, at 2,704,655 to 2,704,909
_2558
HP15_2559: HP15_2559 - membrane protein containing DUF6, transmembrane, at 2,704,923 to 2,705,828
_2559
Position (kb)
2704
2705 Strain fitness (log2 ratio)
-1
0
1
2 at 2703.703 kb on - strand at 2703.732 kb on + strand at 2703.738 kb on + strand at 2703.760 kb on + strand at 2703.778 kb on + strand at 2703.804 kb on - strand at 2703.834 kb on + strand at 2703.847 kb on - strand at 2703.905 kb on + strand, within HP15_2557 at 2703.913 kb on + strand, within HP15_2557 at 2703.923 kb on - strand, within HP15_2557 at 2704.021 kb on + strand, within HP15_2557 at 2704.050 kb on - strand, within HP15_2557 at 2704.313 kb on + strand, within HP15_2557 at 2704.313 kb on + strand, within HP15_2557 at 2704.313 kb on + strand, within HP15_2557 at 2704.321 kb on - strand, within HP15_2557 at 2704.321 kb on - strand, within HP15_2557 at 2704.462 kb on + strand, within HP15_2557 at 2704.472 kb on + strand, within HP15_2557 at 2704.484 kb on - strand, within HP15_2557 at 2704.560 kb on + strand, within HP15_2557 at 2704.567 kb on + strand, within HP15_2557 at 2704.691 kb on - strand, within HP15_2558 at 2704.691 kb on - strand, within HP15_2558 at 2704.701 kb on + strand, within HP15_2558 at 2704.939 kb on - strand at 2705.024 kb on - strand, within HP15_2559 at 2705.029 kb on - strand, within HP15_2559 at 2705.034 kb on - strand, within HP15_2559 at 2705.086 kb on + strand, within HP15_2559 at 2705.162 kb on + strand, within HP15_2559 at 2705.306 kb on + strand, within HP15_2559 at 2705.323 kb on + strand, within HP15_2559 at 2705.351 kb on + strand, within HP15_2559 at 2705.390 kb on - strand, within HP15_2559 at 2705.430 kb on + strand, within HP15_2559 at 2705.493 kb on + strand, within HP15_2559 at 2705.512 kb on + strand, within HP15_2559 at 2705.587 kb on + strand, within HP15_2559 at 2705.668 kb on - strand, within HP15_2559 at 2705.778 kb on + strand at 2705.786 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.001 mg/ml remove 2,703,703 - -0.9 2,703,732 + -0.8 2,703,738 + +0.3 2,703,760 + -0.7 2,703,778 + -0.7 2,703,804 - -0.4 2,703,834 + +0.6 2,703,847 - +0.4 2,703,905 + HP15_2557 0.14 +0.4 2,703,913 + HP15_2557 0.14 -0.4 2,703,923 - HP15_2557 0.16 +0.7 2,704,021 + HP15_2557 0.27 +0.1 2,704,050 - HP15_2557 0.30 +0.7 2,704,313 + HP15_2557 0.59 -0.4 2,704,313 + HP15_2557 0.59 -0.3 2,704,313 + HP15_2557 0.59 -0.6 2,704,321 - HP15_2557 0.60 -1.1 2,704,321 - HP15_2557 0.60 +2.2 2,704,462 + HP15_2557 0.76 +0.6 2,704,472 + HP15_2557 0.77 +0.7 2,704,484 - HP15_2557 0.78 -1.0 2,704,560 + HP15_2557 0.87 +0.2 2,704,567 + HP15_2557 0.88 +0.2 2,704,691 - HP15_2558 0.14 +0.8 2,704,691 - HP15_2558 0.14 -0.1 2,704,701 + HP15_2558 0.18 +0.9 2,704,939 - +0.1 2,705,024 - HP15_2559 0.11 +0.3 2,705,029 - HP15_2559 0.12 +1.8 2,705,034 - HP15_2559 0.12 -0.0 2,705,086 + HP15_2559 0.18 -0.6 2,705,162 + HP15_2559 0.26 -0.4 2,705,306 + HP15_2559 0.42 -0.3 2,705,323 + HP15_2559 0.44 +0.5 2,705,351 + HP15_2559 0.47 +0.9 2,705,390 - HP15_2559 0.52 -0.4 2,705,430 + HP15_2559 0.56 +0.5 2,705,493 + HP15_2559 0.63 -0.3 2,705,512 + HP15_2559 0.65 +0.1 2,705,587 + HP15_2559 0.73 -0.0 2,705,668 - HP15_2559 0.82 -0.5 2,705,778 + +0.4 2,705,786 - +0.3
Or see this region's nucleotide sequence