Strain Fitness in Marinobacter adhaerens HP15 around HP15_2046
Experiment: m.b. Benzalkonium Chloride 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,144,569 | + | HP15_2045 | 0.33 | -0.1 | |
2,144,588 | - | HP15_2045 | 0.36 | -0.2 | |
2,144,715 | + | HP15_2045 | 0.57 | +0.1 | |
2,144,800 | + | HP15_2045 | 0.70 | -0.4 | |
2,144,910 | + | HP15_2045 | 0.88 | -0.6 | |
2,144,930 | - | +1.0 | |||
2,144,964 | - | -1.8 | |||
2,144,989 | - | +0.3 | |||
2,145,099 | + | HP15_2046 | 0.23 | +0.0 | |
2,145,100 | + | HP15_2046 | 0.24 | -0.2 | |
2,145,128 | - | HP15_2046 | 0.30 | +1.0 | |
2,145,128 | - | HP15_2046 | 0.30 | -0.3 | |
2,145,217 | - | HP15_2046 | 0.50 | -0.3 | |
2,145,324 | - | HP15_2046 | 0.74 | +0.3 | |
2,145,461 | + | +0.3 | |||
2,145,469 | - | +0.3 | |||
2,145,469 | - | -1.0 | |||
2,145,469 | - | +0.5 | |||
2,145,607 | - | HP15_2047 | 0.11 | +0.1 | |
2,145,668 | - | HP15_2047 | 0.16 | +0.2 | |
2,145,683 | - | HP15_2047 | 0.17 | -1.7 | |
2,145,773 | + | HP15_2047 | 0.24 | -1.1 | |
2,145,784 | + | HP15_2047 | 0.25 | +0.6 | |
2,145,875 | + | HP15_2047 | 0.31 | +0.3 | |
2,146,025 | + | HP15_2047 | 0.42 | +0.7 | |
2,146,186 | + | HP15_2047 | 0.54 | +0.3 | |
2,146,259 | - | HP15_2047 | 0.60 | -1.3 | |
2,146,411 | - | HP15_2047 | 0.71 | -0.5 |
Or see this region's nucleotide sequence