Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c17360

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
1,812,033	-				-0.1
1,812,124	-		PGA1_c17350	0.14	-0.7
1,812,124	-		PGA1_c17350	0.14	-1.3
1,812,228	+		PGA1_c17350	0.24	-2.1
1,812,263	+		PGA1_c17350	0.27	-2.4
1,812,281	-		PGA1_c17350	0.29	-2.7
1,812,281	-		PGA1_c17350	0.29	-0.7
1,812,355	+		PGA1_c17350	0.36	-1.1
1,812,373	-		PGA1_c17350	0.38	-0.7
1,812,520	+		PGA1_c17350	0.52	-1.1
1,812,528	-		PGA1_c17350	0.52	-0.4
1,812,557	+		PGA1_c17350	0.55	-0.4
1,812,565	-		PGA1_c17350	0.56	-1.4
1,812,573	+		PGA1_c17350	0.57	+1.5
1,812,626	+		PGA1_c17350	0.62	-0.0
1,812,639	-		PGA1_c17350	0.63	+0.0
1,812,708	-		PGA1_c17350	0.70	+0.9
1,812,732	+		PGA1_c17350	0.72	-2.3
1,812,742	-		PGA1_c17350	0.73	-0.4
1,812,835	+		PGA1_c17350	0.82	+0.3
1,813,054	-				-1.3
1,813,087	-				-1.3
1,813,087	-				+1.9
1,813,087	-				-0.0
1,813,087	-				-0.4
1,813,097	-				+1.2
1,813,113	-		PGA1_c17360	0.10	-1.7
1,813,141	-		PGA1_c17360	0.13	-0.3
1,813,199	+		PGA1_c17360	0.20	-0.6
1,813,287	+		PGA1_c17360	0.30	-1.0
1,813,308	-		PGA1_c17360	0.33	+1.7
1,813,332	+		PGA1_c17360	0.35	+0.9
1,813,460	+		PGA1_c17360	0.50	-0.3
1,813,468	-		PGA1_c17360	0.51	+0.9
1,813,492	-		PGA1_c17360	0.54	+0.3
1,813,492	-		PGA1_c17360	0.54	-0.2
1,813,541	+		PGA1_c17360	0.59	-0.0
1,813,558	+		PGA1_c17360	0.61	-0.4
1,813,558	+		PGA1_c17360	0.61	+0.6
1,813,610	+		PGA1_c17360	0.67	+0.3
1,813,619	-		PGA1_c17360	0.68	-0.6
1,813,626	+		PGA1_c17360	0.69	-1.6
1,813,629	-		PGA1_c17360	0.69	+0.6
1,813,634	-		PGA1_c17360	0.70	+0.4
1,813,634	-		PGA1_c17360	0.70	-0.2
1,813,648	+		PGA1_c17360	0.71	-0.9
1,813,679	+		PGA1_c17360	0.75	+0.4
1,813,679	+		PGA1_c17360	0.75	-0.3
1,813,679	+		PGA1_c17360	0.75	-0.1
1,813,687	-		PGA1_c17360	0.76	+1.7
1,813,695	-		PGA1_c17360	0.77	+1.9
1,813,716	+		PGA1_c17360	0.79	-0.6
1,813,734	+		PGA1_c17360	0.81	-1.8
1,813,734	+		PGA1_c17360	0.81	-1.0
1,813,763	-		PGA1_c17360	0.84	+0.0
1,813,773	-		PGA1_c17360	0.86	-0.3
1,813,780	+		PGA1_c17360	0.86	-1.0
1,813,780	+		PGA1_c17360	0.86	-0.4
1,813,782	+		PGA1_c17360	0.87	-1.1
1,813,810	+		PGA1_c17360	0.90	-0.1
1,813,827	+				+0.4
1,813,832	+				+1.0
1,813,860	+				+0.3
1,813,868	-				+0.4
1,813,868	-				-1.7
1,813,870	+				-1.1
1,813,870	+				-0.5
1,813,870	+				+0.7
1,813,870	+				+0.1
1,813,870	+				-0.2
1,813,870	+				+0.9
1,813,870	+				-0.1
1,813,870	+				+0.8
1,813,870	+				-0.7
1,813,878	-				+1.0
1,813,878	-				-1.7
1,813,878	-				+0.1
1,813,878	-				+0.3
1,813,878	-				+0.2
1,813,878	-				+0.5
1,813,878	-				+1.1
1,813,878	-				-0.5
1,813,878	-				-1.7
1,813,878	-				-1.1
1,813,878	-				+1.7
1,813,878	-				-3.0
1,813,878	-				+1.3
1,813,878	-				+1.4
1,813,878	-				-0.2
1,813,878	-				+0.7
1,813,878	-				+0.1
1,813,878	-				-1.3
1,813,878	-				+0.5
1,813,878	-				+0.2
1,813,878	-				+0.7
1,813,878	-				-0.0
1,813,878	-				+0.7
1,813,878	-				-0.6
1,813,878	-				-2.6
1,813,878	-				+0.1
1,813,878	-				+0.1
1,813,878	-				+0.9
1,813,878	-				+0.5
1,813,878	-				-0.4
1,813,878	-				-0.1
1,813,878	-				+0.1
1,813,878	-				-1.4
1,813,878	-				-0.6
1,813,878	-				+0.7
1,813,895	-				+0.4
1,813,897	+				+0.3
1,813,900	-				+1.8
1,813,905	-				+1.4
1,813,912	+				-1.8
1,813,912	-				-0.6
1,813,912	-				+0.7
1,813,917	-				-0.4
1,813,920	+				+0.1
1,813,922	+				+0.6
1,813,925	-				-0.6
1,813,929	+				+0.1
1,813,931	+				-0.4
1,813,931	+				+0.3
1,813,931	+				-0.4
1,813,931	+				+0.1
1,813,931	+				-0.3
1,813,931	+				+0.4
1,813,931	+				-0.5
1,813,931	+				+0.8
1,813,931	+				+1.1
1,813,931	+				+2.0
1,813,931	+				+0.6
1,813,931	+				+0.5
1,813,931	+				-0.5
1,813,931	+				+0.8
1,813,931	+				-0.0
1,813,931	+				+0.2
1,813,931	+				-1.7
1,813,931	+				-1.6
1,813,931	+				+0.8
1,813,931	+				+1.3
1,813,933	-				+0.9
1,813,933	-				-0.1
1,813,935	-				+0.3
1,813,937	-				+0.3
1,813,939	+				+1.5
1,813,939	+				+0.1
1,813,939	+				+0.3
1,813,939	+				+0.4
1,813,939	+				-0.0
1,813,939	+				+0.0
1,813,939	+				+0.4
1,813,939	-				+0.7
1,813,939	-				+0.4
1,813,939	-				-0.3
1,813,939	-				+0.3
1,813,939	-				+0.7
1,813,939	-				+1.3
1,813,939	-				-1.6
1,813,939	-				-0.4
1,813,939	-				+0.4
1,813,939	-				-1.5
1,813,939	-				+0.8
1,813,939	-				+0.0
1,813,939	-				-0.2
1,813,939	-				+0.9
1,813,939	-				+1.0
1,813,939	-				+0.1
1,813,939	-				+0.1
1,813,939	-				+0.3
1,813,944	+				+1.5
1,813,947	-				+0.3
1,813,947	-				+1.2
1,813,949	+				-0.7
1,813,949	+				+1.6
1,813,949	+				-0.1
1,813,949	+				+0.1
1,813,949	+				-1.0
1,813,949	+				+0.6
1,813,949	+				+0.2
1,813,949	+				-0.7
1,813,949	+				+1.5
1,813,949	+				-0.6
1,813,953	+				-0.4
1,813,957	-				+0.1
1,813,957	-				-0.9
1,813,957	-				-0.2
1,813,957	-				-0.6
1,813,957	-				-1.7
1,813,957	-				-0.9
1,813,957	-				-0.2
1,813,957	-				+0.3
1,813,958	-				+0.1
1,813,996	+				+0.2
1,814,065	+				-1.5
1,814,073	-				+0.3
1,814,081	-				+0.9
1,814,083	+				-1.8
1,814,083	+				-0.2
1,814,083	+				+0.2
1,814,083	+				+1.0
1,814,083	+				+0.1
1,814,083	+				+0.9
1,814,086	+				+0.6
1,814,091	-				-0.4
1,814,091	-				-1.1
1,814,091	-				+0.3
1,814,091	-				+0.3
1,814,091	-				-1.9
1,814,094	-				-0.5
1,814,121	+				+1.0
1,814,121	+				+2.6
1,814,133	-				-0.4
1,814,133	-				+0.8
1,814,133	-				-1.1
1,814,133	-				+1.7
1,814,165	-				-0.1
1,814,181	+				-0.0
1,814,181	+				+0.1
1,814,181	+				+0.5
1,814,183	-				+0.8
1,814,189	-				+0.6
1,814,189	-				-2.1
1,814,189	-				+1.0
1,814,210	+				+1.0
1,814,210	+				-2.7
1,814,210	+				+0.1
1,814,210	+				+0.9
1,814,218	-				-0.1
1,814,223	-				-0.8
1,814,230	-				+0.9
1,814,230	-				-1.3
1,814,230	-				-0.9
1,814,230	-				-0.1
1,814,230	-				-0.4
1,814,234	-				-0.3
1,814,243	+				-1.8
1,814,243	+				+1.9
1,814,251	-				-0.7
1,814,253	+				+1.3
1,814,253	+				+0.7
1,814,253	+				-0.7
1,814,253	+				+0.9
1,814,253	+				+1.9
1,814,253	+				-0.1
1,814,253	+				+0.7
1,814,253	+				+2.9
1,814,261	-				-0.3
1,814,261	-				+0.9
1,814,261	-				-2.0
1,814,261	-				-1.1
1,814,261	-				+0.0
1,814,277	+				+0.3
1,814,305	+				+0.2
1,814,308	+				+0.0
1,814,308	+				+0.1
1,814,308	+				+0.9
1,814,308	+				+0.0
1,814,313	-				+0.2
1,814,325	+				+0.3
1,814,325	+				+1.2
1,814,325	+				+0.1
1,814,325	+				-2.1
1,814,325	+				+0.2
1,814,325	+				+0.1
1,814,325	+				-1.4
1,814,325	+				+0.5
1,814,325	+				-0.5
1,814,325	+				-0.3
1,814,325	+				-0.1
1,814,327	+				+0.3
1,814,327	+				+0.3
1,814,327	+				+0.9
1,814,327	+				+0.9
1,814,327	+				+0.5
1,814,327	+				-2.8
1,814,327	-				+0.8
1,814,332	+				+0.5
1,814,332	+				-0.7
1,814,333	-				+0.3
1,814,333	-				-0.1
1,814,333	-				-1.9
1,814,333	-				-0.3
1,814,333	-				-0.9
1,814,333	-				-1.1
1,814,333	-				+0.3
1,814,333	-				-0.2
1,814,333	-				+1.6
1,814,333	-				-0.2
1,814,333	-				+0.7
1,814,335	-				+1.2
1,814,348	-				-0.3
1,814,348	-				-1.6
1,814,374	+				-1.4
1,814,414	+				-1.8
1,814,414	+				+0.1
1,814,417	-				+0.3
1,814,419	+				+0.7
1,814,422	-				+1.2
1,814,450	+				+0.3
1,814,450	+				+0.9
1,814,458	-				-1.6
1,814,458	-				-1.7
1,814,458	-				+0.2
1,814,458	-				+0.2
1,814,458	-				+0.3
1,814,468	-				-1.3
1,814,468	-				+0.0
1,814,472	-				-0.1
1,814,489	-				+0.7
1,814,515	-				-0.4
1,814,517	-				+1.0
1,814,523	+				+0.9
1,814,525	+				-0.5
1,814,533	-				-0.4
1,814,546	+				-2.6
1,814,546	-				+2.5
1,814,546	-				-0.4
1,814,546	-				+0.3
1,814,554	-				-0.2
1,814,558	+				-2.4
1,814,558	+				-0.1
1,814,558	+				+1.6
1,814,561	-				+2.3
1,814,566	-				-0.5
1,814,566	-				-0.3
1,814,573	+				+2.3
1,814,573	+				+0.7
1,814,573	+				+2.9
1,814,573	+				+0.1
1,814,573	-				+0.5
1,814,573	-				+0.6
1,814,573	-				+0.8
1,814,581	-				+0.2
1,814,589	+				-0.0
1,814,589	+				-0.5
1,814,594	+				-0.1
1,814,597	-				+0.7
1,814,597	-				+0.9
1,814,597	-				-2.3
1,814,597	-				+0.5
1,814,597	-				+2.9
1,814,597	-				-0.3
1,814,597	-				+1.5
1,814,602	-				+1.1
1,814,644	+				-0.6
1,814,644	+				-1.6
1,814,644	+				-0.7
1,814,652	-				+0.9
1,814,652	-				+0.9
1,814,652	-				-0.2
1,814,726	+				+0.6
1,814,726	+				+1.5
1,814,739	+				-1.1
1,814,742	-				-0.3
1,814,765	-				-0.6
1,814,772	-				+0.9
1,814,849	-				-0.5
1,814,849	-				-0.7
1,814,879	+				+2.5
1,814,880	+				-0.7
1,814,880	-				-0.7
1,814,888	-				+0.4
1,814,888	-				+0.7
1,814,888	-				+0.1
1,814,888	-				+0.0
1,814,888	-				+0.2