Strain Fitness in Marinobacter adhaerens HP15 around HP15_1290
Experiment: m.b. Benzalkonium Chloride 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.001 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,349,612 | - | HP15_1289 | 0.57 | -2.4 | |
1,349,717 | - | HP15_1289 | 0.63 | -0.9 | |
1,349,733 | + | HP15_1289 | 0.64 | -1.6 | |
1,349,814 | + | HP15_1289 | 0.69 | -2.0 | |
1,349,967 | + | HP15_1289 | 0.78 | +0.5 | |
1,350,116 | + | HP15_1289 | 0.86 | -2.3 | |
1,350,305 | - | -2.1 | |||
1,350,384 | + | -1.3 | |||
1,350,392 | - | -1.8 | |||
1,350,528 | - | HP15_1290 | 0.20 | -0.4 | |
1,350,603 | - | HP15_1290 | 0.37 | -1.9 | |
1,350,649 | + | HP15_1290 | 0.48 | -1.9 | |
1,350,712 | - | HP15_1290 | 0.63 | -1.7 | |
1,350,924 | - | +0.3 | |||
1,350,928 | + | -3.4 | |||
1,350,936 | - | +0.1 | |||
1,350,936 | - | -2.4 | |||
1,350,936 | - | -2.7 | |||
1,350,936 | - | -1.6 | |||
1,351,280 | + | HP15_1291 | 0.39 | -0.9 | |
1,351,280 | + | HP15_1291 | 0.39 | -0.3 | |
1,351,280 | + | HP15_1291 | 0.39 | -0.9 | |
1,351,406 | + | HP15_1291 | 0.61 | -2.5 | |
1,351,413 | + | HP15_1291 | 0.62 | -1.1 | |
1,351,459 | - | HP15_1291 | 0.70 | -1.1 | |
1,351,553 | - | HP15_1291 | 0.86 | +0.6 | |
1,351,569 | + | HP15_1291 | 0.89 | -0.2 | |
1,351,602 | + | +0.3 | |||
1,351,684 | - | -1.1 |
Or see this region's nucleotide sequence