Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_807 and HP15_808 are separated by 281 nucleotides HP15_808 and HP15_809 are separated by 59 nucleotides HP15_809 and HP15_810 are separated by 14 nucleotides
HP15_807: HP15_807 - histidine kinase, at 823,798 to 825,783
_807
HP15_808: HP15_808 - flagellar synthesis regulator FleN, at 826,065 to 827,318
_808
HP15_809: HP15_809 - hypothetical protein, at 827,378 to 827,521
_809
HP15_810: HP15_810 - fatty acyl-CoA reductase 1, at 827,536 to 829,071
_810
Position (kb) 826
827
828 Strain fitness (log2 ratio) -2
-1
0
1
2 at 825.152 kb on + strand, within HP15_807 at 825.158 kb on + strand, within HP15_807 at 825.211 kb on + strand, within HP15_807 at 825.216 kb on + strand, within HP15_807 at 825.492 kb on - strand, within HP15_807 at 825.546 kb on - strand, within HP15_807 at 825.580 kb on - strand, within HP15_807 at 825.601 kb on + strand at 825.629 kb on + strand at 825.760 kb on + strand at 825.793 kb on - strand at 826.043 kb on + strand at 826.067 kb on + strand at 826.075 kb on - strand at 826.075 kb on - strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.277 kb on - strand, within HP15_808 at 826.310 kb on - strand, within HP15_808 at 826.431 kb on + strand, within HP15_808 at 826.439 kb on - strand, within HP15_808 at 826.446 kb on + strand, within HP15_808 at 826.551 kb on - strand, within HP15_808 at 826.594 kb on + strand, within HP15_808 at 826.602 kb on - strand, within HP15_808 at 826.630 kb on + strand, within HP15_808 at 826.712 kb on + strand, within HP15_808 at 826.729 kb on + strand, within HP15_808 at 826.753 kb on + strand, within HP15_808 at 826.812 kb on - strand, within HP15_808 at 826.812 kb on - strand, within HP15_808 at 826.812 kb on - strand, within HP15_808 at 826.863 kb on - strand, within HP15_808 at 826.944 kb on + strand, within HP15_808 at 826.962 kb on - strand, within HP15_808 at 827.005 kb on - strand, within HP15_808 at 827.015 kb on - strand, within HP15_808 at 827.077 kb on - strand, within HP15_808 at 827.134 kb on - strand, within HP15_808 at 827.206 kb on + strand at 827.219 kb on + strand at 827.298 kb on + strand at 827.537 kb on + strand at 827.545 kb on - strand at 827.550 kb on + strand at 827.586 kb on + strand at 827.594 kb on - strand at 828.042 kb on - strand, within HP15_810 at 828.055 kb on - strand, within HP15_810 at 828.112 kb on + strand, within HP15_810 at 828.120 kb on - strand, within HP15_810 at 828.276 kb on - strand, within HP15_810
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 825,152 + HP15_807 0.68 -0.3 825,158 + HP15_807 0.68 +0.1 825,211 + HP15_807 0.71 +0.6 825,216 + HP15_807 0.71 -0.6 825,492 - HP15_807 0.85 +0.2 825,546 - HP15_807 0.88 +0.5 825,580 - HP15_807 0.90 +1.7 825,601 + +0.0 825,629 + -1.1 825,760 + +1.5 825,793 - -0.8 826,043 + -0.3 826,067 + -0.2 826,075 - +0.1 826,075 - -0.5 826,185 - +1.1 826,185 - +0.1 826,277 - HP15_808 0.17 -1.8 826,310 - HP15_808 0.20 +0.5 826,431 + HP15_808 0.29 -1.2 826,439 - HP15_808 0.30 -0.9 826,446 + HP15_808 0.30 +0.2 826,551 - HP15_808 0.39 -0.7 826,594 + HP15_808 0.42 -0.8 826,602 - HP15_808 0.43 -0.9 826,630 + HP15_808 0.45 +0.7 826,712 + HP15_808 0.52 +0.0 826,729 + HP15_808 0.53 -1.1 826,753 + HP15_808 0.55 +1.0 826,812 - HP15_808 0.60 +1.8 826,812 - HP15_808 0.60 +2.4 826,812 - HP15_808 0.60 +1.3 826,863 - HP15_808 0.64 -1.5 826,944 + HP15_808 0.70 -0.2 826,962 - HP15_808 0.72 -1.0 827,005 - HP15_808 0.75 +0.1 827,015 - HP15_808 0.76 +0.4 827,077 - HP15_808 0.81 -1.3 827,134 - HP15_808 0.85 -0.5 827,206 + +0.0 827,219 + +1.9 827,298 + +1.1 827,537 + +0.3 827,545 - +0.0 827,550 + +0.7 827,586 + +0.0 827,594 - -0.9 828,042 - HP15_810 0.33 -1.0 828,055 - HP15_810 0.34 -1.4 828,112 + HP15_810 0.38 +0.4 828,120 - HP15_810 0.38 +0.1 828,276 - HP15_810 0.48 +1.3
Or see this region's nucleotide sequence