Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2734 and HP15_2735 are separated by 118 nucleotides HP15_2735 and HP15_2736 are separated by 48 nucleotides HP15_2736 and HP15_2737 are separated by 187 nucleotides
HP15_2734: HP15_2734 - conserved hypothetical protein, at 2,887,325 to 2,888,482
_2734
HP15_2735: HP15_2735 - diguanylate cyclase with PAS/PAC sensor, at 2,888,601 to 2,889,539
_2735
HP15_2736: HP15_2736 - pseudoazurin, at 2,889,588 to 2,890,037
_2736
HP15_2737: HP15_2737 - Coq7 family protein, at 2,890,225 to 2,890,803
_2737
Position (kb)
2888
2889
2890 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2887.623 kb on - strand, within HP15_2734 at 2887.712 kb on - strand, within HP15_2734 at 2887.722 kb on - strand, within HP15_2734 at 2887.734 kb on - strand, within HP15_2734 at 2887.734 kb on - strand, within HP15_2734 at 2887.917 kb on + strand, within HP15_2734 at 2887.925 kb on - strand, within HP15_2734 at 2888.029 kb on + strand, within HP15_2734 at 2888.029 kb on + strand, within HP15_2734 at 2888.037 kb on - strand, within HP15_2734 at 2888.148 kb on + strand, within HP15_2734 at 2888.181 kb on - strand, within HP15_2734 at 2888.261 kb on - strand, within HP15_2734 at 2888.345 kb on - strand, within HP15_2734 at 2888.511 kb on + strand at 2888.511 kb on + strand at 2888.548 kb on - strand at 2888.571 kb on + strand at 2888.574 kb on - strand at 2888.579 kb on - strand at 2888.622 kb on - strand at 2888.625 kb on + strand at 2888.663 kb on + strand at 2888.748 kb on + strand, within HP15_2735 at 2888.775 kb on - strand, within HP15_2735 at 2888.782 kb on - strand, within HP15_2735 at 2889.051 kb on + strand, within HP15_2735 at 2889.157 kb on - strand, within HP15_2735 at 2889.163 kb on + strand, within HP15_2735 at 2889.179 kb on - strand, within HP15_2735 at 2889.416 kb on - strand, within HP15_2735 at 2889.714 kb on + strand, within HP15_2736 at 2889.720 kb on + strand, within HP15_2736 at 2889.752 kb on + strand, within HP15_2736 at 2889.752 kb on + strand, within HP15_2736 at 2889.773 kb on + strand, within HP15_2736 at 2889.812 kb on - strand, within HP15_2736 at 2889.820 kb on - strand, within HP15_2736 at 2889.822 kb on + strand, within HP15_2736 at 2889.830 kb on + strand, within HP15_2736 at 2889.844 kb on + strand, within HP15_2736 at 2889.846 kb on + strand, within HP15_2736 at 2889.846 kb on + strand, within HP15_2736 at 2889.854 kb on - strand, within HP15_2736 at 2890.006 kb on + strand at 2890.077 kb on + strand at 2890.096 kb on + strand at 2890.120 kb on + strand at 2890.250 kb on - strand at 2890.264 kb on - strand at 2890.332 kb on - strand, within HP15_2737 at 2890.436 kb on + strand, within HP15_2737 at 2890.444 kb on - strand, within HP15_2737 at 2890.444 kb on - strand, within HP15_2737
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 2,887,623 - HP15_2734 0.26 +0.9 2,887,712 - HP15_2734 0.33 +1.6 2,887,722 - HP15_2734 0.34 +0.3 2,887,734 - HP15_2734 0.35 -0.3 2,887,734 - HP15_2734 0.35 -0.4 2,887,917 + HP15_2734 0.51 +0.0 2,887,925 - HP15_2734 0.52 -0.9 2,888,029 + HP15_2734 0.61 -0.6 2,888,029 + HP15_2734 0.61 +0.3 2,888,037 - HP15_2734 0.61 +0.0 2,888,148 + HP15_2734 0.71 -0.3 2,888,181 - HP15_2734 0.74 -0.0 2,888,261 - HP15_2734 0.81 -1.3 2,888,345 - HP15_2734 0.88 -0.3 2,888,511 + +0.4 2,888,511 + -0.8 2,888,548 - +0.2 2,888,571 + +0.2 2,888,574 - -0.4 2,888,579 - +3.9 2,888,622 - +0.2 2,888,625 + -1.2 2,888,663 + +0.3 2,888,748 + HP15_2735 0.16 -0.6 2,888,775 - HP15_2735 0.19 -0.7 2,888,782 - HP15_2735 0.19 +0.4 2,889,051 + HP15_2735 0.48 -1.6 2,889,157 - HP15_2735 0.59 +0.4 2,889,163 + HP15_2735 0.60 -0.2 2,889,179 - HP15_2735 0.62 -0.9 2,889,416 - HP15_2735 0.87 -0.4 2,889,714 + HP15_2736 0.28 -0.2 2,889,720 + HP15_2736 0.29 +0.8 2,889,752 + HP15_2736 0.36 +0.5 2,889,752 + HP15_2736 0.36 +2.1 2,889,773 + HP15_2736 0.41 -0.6 2,889,812 - HP15_2736 0.50 -0.1 2,889,820 - HP15_2736 0.52 +0.7 2,889,822 + HP15_2736 0.52 +2.4 2,889,830 + HP15_2736 0.54 +0.2 2,889,844 + HP15_2736 0.57 -2.3 2,889,846 + HP15_2736 0.57 +0.0 2,889,846 + HP15_2736 0.57 -0.8 2,889,854 - HP15_2736 0.59 -0.6 2,890,006 + -0.0 2,890,077 + -0.7 2,890,096 + +0.3 2,890,120 + -0.3 2,890,250 - +1.6 2,890,264 - -0.7 2,890,332 - HP15_2737 0.18 +1.8 2,890,436 + HP15_2737 0.36 -0.0 2,890,444 - HP15_2737 0.38 +0.2 2,890,444 - HP15_2737 0.38 +0.1
Or see this region's nucleotide sequence