Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2716 and HP15_2717 are separated by 1 nucleotides HP15_2717 and HP15_2718 are separated by 219 nucleotides HP15_2718 and HP15_2719 are separated by 94 nucleotides
HP15_2716: HP15_2716 - lemA family domain protein, at 2,868,277 to 2,870,478
_2716
HP15_2717: HP15_2717 - enoyl-CoA hydratase, at 2,870,480 to 2,871,178
_2717
HP15_2718: HP15_2718 - transcriptional regulator, LysR family protein, at 2,871,398 to 2,872,288
_2718
HP15_2719: HP15_2719 - transmembrane efflux protein, at 2,872,383 to 2,873,555
_2719
Position (kb)
2871
2872
2873 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2870.541 kb on - strand at 2870.553 kb on + strand, within HP15_2717 at 2870.639 kb on - strand, within HP15_2717 at 2870.776 kb on - strand, within HP15_2717 at 2870.849 kb on - strand, within HP15_2717 at 2870.932 kb on + strand, within HP15_2717 at 2870.943 kb on + strand, within HP15_2717 at 2870.951 kb on - strand, within HP15_2717 at 2870.951 kb on - strand, within HP15_2717 at 2871.016 kb on - strand, within HP15_2717 at 2871.050 kb on - strand, within HP15_2717 at 2871.050 kb on - strand, within HP15_2717 at 2871.050 kb on - strand, within HP15_2717 at 2871.050 kb on - strand, within HP15_2717 at 2871.072 kb on + strand, within HP15_2717 at 2871.072 kb on + strand, within HP15_2717 at 2871.181 kb on + strand at 2871.187 kb on - strand at 2871.189 kb on - strand at 2871.190 kb on - strand at 2871.296 kb on + strand at 2871.303 kb on + strand at 2871.304 kb on - strand at 2871.323 kb on - strand at 2871.338 kb on + strand at 2871.445 kb on - strand at 2871.456 kb on + strand at 2871.499 kb on + strand, within HP15_2718 at 2871.540 kb on - strand, within HP15_2718 at 2871.586 kb on - strand, within HP15_2718 at 2871.620 kb on + strand, within HP15_2718 at 2871.622 kb on + strand, within HP15_2718 at 2871.627 kb on + strand, within HP15_2718 at 2871.649 kb on + strand, within HP15_2718 at 2871.649 kb on + strand, within HP15_2718 at 2871.663 kb on + strand, within HP15_2718 at 2871.993 kb on + strand, within HP15_2718 at 2871.993 kb on + strand, within HP15_2718 at 2872.001 kb on - strand, within HP15_2718 at 2872.001 kb on - strand, within HP15_2718 at 2872.002 kb on - strand, within HP15_2718 at 2872.044 kb on - strand, within HP15_2718 at 2872.145 kb on + strand, within HP15_2718 at 2872.228 kb on - strand at 2872.235 kb on + strand at 2872.344 kb on + strand at 2872.457 kb on + strand at 2872.465 kb on - strand at 2872.493 kb on + strand at 2872.493 kb on + strand at 2872.525 kb on + strand, within HP15_2719 at 2872.533 kb on - strand, within HP15_2719 at 2872.588 kb on + strand, within HP15_2719 at 2872.590 kb on + strand, within HP15_2719 at 2872.621 kb on + strand, within HP15_2719 at 2872.757 kb on + strand, within HP15_2719 at 2872.802 kb on + strand, within HP15_2719 at 2872.802 kb on + strand, within HP15_2719 at 2872.867 kb on - strand, within HP15_2719 at 2872.903 kb on - strand, within HP15_2719 at 2872.960 kb on + strand, within HP15_2719 at 2872.969 kb on - strand, within HP15_2719 at 2873.000 kb on + strand, within HP15_2719 at 2873.111 kb on + strand, within HP15_2719 at 2873.119 kb on - strand, within HP15_2719 at 2873.123 kb on + strand, within HP15_2719 at 2873.167 kb on + strand, within HP15_2719 at 2873.167 kb on + strand, within HP15_2719 at 2873.168 kb on + strand, within HP15_2719 at 2873.177 kb on + strand, within HP15_2719 at 2873.179 kb on + strand, within HP15_2719 at 2873.179 kb on + strand, within HP15_2719 at 2873.187 kb on - strand, within HP15_2719 at 2873.206 kb on + strand, within HP15_2719
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 2,870,541 - +0.9 2,870,553 + HP15_2717 0.10 -0.2 2,870,639 - HP15_2717 0.23 -0.6 2,870,776 - HP15_2717 0.42 -0.0 2,870,849 - HP15_2717 0.53 -0.6 2,870,932 + HP15_2717 0.65 +0.2 2,870,943 + HP15_2717 0.66 -1.2 2,870,951 - HP15_2717 0.67 -0.1 2,870,951 - HP15_2717 0.67 +0.2 2,871,016 - HP15_2717 0.77 -0.8 2,871,050 - HP15_2717 0.82 -0.8 2,871,050 - HP15_2717 0.82 -0.3 2,871,050 - HP15_2717 0.82 +0.1 2,871,050 - HP15_2717 0.82 -0.1 2,871,072 + HP15_2717 0.85 -0.0 2,871,072 + HP15_2717 0.85 -1.2 2,871,181 + +0.0 2,871,187 - +0.8 2,871,189 - +1.5 2,871,190 - +1.1 2,871,296 + -0.1 2,871,303 + +1.4 2,871,304 - -0.1 2,871,323 - +1.8 2,871,338 + -1.2 2,871,445 - +0.4 2,871,456 + -0.4 2,871,499 + HP15_2718 0.11 -0.7 2,871,540 - HP15_2718 0.16 -0.6 2,871,586 - HP15_2718 0.21 -0.2 2,871,620 + HP15_2718 0.25 -0.0 2,871,622 + HP15_2718 0.25 -1.4 2,871,627 + HP15_2718 0.26 +1.4 2,871,649 + HP15_2718 0.28 -1.6 2,871,649 + HP15_2718 0.28 -0.7 2,871,663 + HP15_2718 0.30 +1.1 2,871,993 + HP15_2718 0.67 -0.1 2,871,993 + HP15_2718 0.67 -1.3 2,872,001 - HP15_2718 0.68 -0.3 2,872,001 - HP15_2718 0.68 +1.5 2,872,002 - HP15_2718 0.68 -0.3 2,872,044 - HP15_2718 0.73 -0.2 2,872,145 + HP15_2718 0.84 -0.8 2,872,228 - -0.6 2,872,235 + +0.4 2,872,344 + +0.2 2,872,457 + +0.3 2,872,465 - +1.2 2,872,493 + -1.8 2,872,493 + +0.5 2,872,525 + HP15_2719 0.12 -0.1 2,872,533 - HP15_2719 0.13 -0.9 2,872,588 + HP15_2719 0.17 -0.1 2,872,590 + HP15_2719 0.18 -0.1 2,872,621 + HP15_2719 0.20 -0.5 2,872,757 + HP15_2719 0.32 +0.3 2,872,802 + HP15_2719 0.36 +0.3 2,872,802 + HP15_2719 0.36 -0.2 2,872,867 - HP15_2719 0.41 -0.0 2,872,903 - HP15_2719 0.44 +1.5 2,872,960 + HP15_2719 0.49 +0.0 2,872,969 - HP15_2719 0.50 +0.0 2,873,000 + HP15_2719 0.53 -0.4 2,873,111 + HP15_2719 0.62 -0.2 2,873,119 - HP15_2719 0.63 +1.4 2,873,123 + HP15_2719 0.63 +0.5 2,873,167 + HP15_2719 0.67 -0.8 2,873,167 + HP15_2719 0.67 -0.1 2,873,168 + HP15_2719 0.67 -0.5 2,873,177 + HP15_2719 0.68 -1.2 2,873,179 + HP15_2719 0.68 -0.6 2,873,179 + HP15_2719 0.68 +0.2 2,873,187 - HP15_2719 0.69 -0.1 2,873,206 + HP15_2719 0.70 -0.5
Or see this region's nucleotide sequence