Strain Fitness in Marinobacter adhaerens HP15 around HP15_2561

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2560 and HP15_2561 overlap by 27 nucleotidesHP15_2561 and HP15_2562 are separated by 10 nucleotides HP15_2560: HP15_2560 - TRAP dicarboxylate transporter- DctP subunit, at 2,706,000 to 2,707,103 _2560 HP15_2561: HP15_2561 - MscS Mechanosensitive ion channel, at 2,707,077 to 2,707,880 _2561 HP15_2562: HP15_2562 - conserved hypothetical protein, at 2,707,891 to 2,709,126 _2562 Position (kb) 2707 2708Strain fitness (log2 ratio) -1 0 1 2at 2706.085 kb on - strandat 2706.127 kb on + strand, within HP15_2560at 2706.306 kb on + strand, within HP15_2560at 2706.379 kb on - strand, within HP15_2560at 2706.419 kb on - strand, within HP15_2560at 2706.421 kb on + strand, within HP15_2560at 2706.429 kb on - strand, within HP15_2560at 2706.502 kb on - strand, within HP15_2560at 2706.564 kb on + strand, within HP15_2560at 2706.592 kb on + strand, within HP15_2560at 2706.607 kb on + strand, within HP15_2560at 2706.646 kb on - strand, within HP15_2560at 2706.667 kb on - strand, within HP15_2560at 2706.720 kb on + strand, within HP15_2560at 2706.728 kb on - strand, within HP15_2560at 2706.728 kb on - strand, within HP15_2560at 2706.738 kb on - strand, within HP15_2560at 2706.851 kb on + strand, within HP15_2560at 2706.873 kb on - strand, within HP15_2560at 2706.986 kb on + strand, within HP15_2560at 2707.083 kb on - strandat 2707.083 kb on - strandat 2707.121 kb on + strandat 2707.198 kb on + strand, within HP15_2561at 2707.279 kb on + strand, within HP15_2561at 2707.356 kb on + strand, within HP15_2561at 2707.356 kb on + strand, within HP15_2561at 2707.483 kb on + strand, within HP15_2561at 2707.483 kb on + strand, within HP15_2561at 2707.549 kb on - strand, within HP15_2561at 2707.550 kb on - strand, within HP15_2561at 2707.598 kb on - strand, within HP15_2561at 2707.653 kb on + strand, within HP15_2561at 2707.785 kb on + strand, within HP15_2561at 2707.793 kb on - strand, within HP15_2561at 2707.793 kb on - strand, within HP15_2561at 2708.008 kb on + strandat 2708.008 kb on + strandat 2708.012 kb on + strandat 2708.016 kb on - strand, within HP15_2562at 2708.022 kb on + strand, within HP15_2562at 2708.067 kb on + strand, within HP15_2562at 2708.115 kb on + strand, within HP15_2562at 2708.123 kb on - strand, within HP15_2562at 2708.185 kb on - strand, within HP15_2562at 2708.213 kb on - strand, within HP15_2562at 2708.770 kb on - strand, within HP15_2562

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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2,706,085 - +0.0
2,706,127 + HP15_2560 0.12 -1.0
2,706,306 + HP15_2560 0.28 -0.2
2,706,379 - HP15_2560 0.34 -1.0
2,706,419 - HP15_2560 0.38 -0.5
2,706,421 + HP15_2560 0.38 +0.2
2,706,429 - HP15_2560 0.39 +0.4
2,706,502 - HP15_2560 0.45 +0.8
2,706,564 + HP15_2560 0.51 +1.1
2,706,592 + HP15_2560 0.54 -0.2
2,706,607 + HP15_2560 0.55 -1.5
2,706,646 - HP15_2560 0.59 -0.1
2,706,667 - HP15_2560 0.60 -0.2
2,706,720 + HP15_2560 0.65 +0.1
2,706,728 - HP15_2560 0.66 +1.6
2,706,728 - HP15_2560 0.66 -0.5
2,706,738 - HP15_2560 0.67 -0.4
2,706,851 + HP15_2560 0.77 -0.5
2,706,873 - HP15_2560 0.79 -1.2
2,706,986 + HP15_2560 0.89 -1.0
2,707,083 - +1.3
2,707,083 - +0.5
2,707,121 + -0.9
2,707,198 + HP15_2561 0.15 -0.3
2,707,279 + HP15_2561 0.25 +0.8
2,707,356 + HP15_2561 0.35 +0.5
2,707,356 + HP15_2561 0.35 +1.0
2,707,483 + HP15_2561 0.50 +0.9
2,707,483 + HP15_2561 0.50 -0.0
2,707,549 - HP15_2561 0.59 +0.5
2,707,550 - HP15_2561 0.59 -0.2
2,707,598 - HP15_2561 0.65 +0.6
2,707,653 + HP15_2561 0.72 +0.7
2,707,785 + HP15_2561 0.88 -0.9
2,707,793 - HP15_2561 0.89 +0.7
2,707,793 - HP15_2561 0.89 +0.4
2,708,008 + +0.4
2,708,008 + +0.3
2,708,012 + +1.2
2,708,016 - HP15_2562 0.10 -0.1
2,708,022 + HP15_2562 0.11 +0.5
2,708,067 + HP15_2562 0.14 -0.2
2,708,115 + HP15_2562 0.18 -0.3
2,708,123 - HP15_2562 0.19 +1.8
2,708,185 - HP15_2562 0.24 +1.6
2,708,213 - HP15_2562 0.26 -0.6
2,708,770 - HP15_2562 0.71 -1.1

Or see this region's nucleotide sequence