Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2538 and HP15_2540 are separated by 143 nucleotides HP15_2540 and HP15_2539 overlap by 21 nucleotides HP15_2539 and HP15_2541 are separated by 22 nucleotides HP15_2541 and HP15_2542 are separated by 155 nucleotides
HP15_2538: HP15_2538 - acetyl/propionyl-CoA carboxylase beta subunit, at 2,682,796 to 2,684,412
_2538
HP15_2540: HP15_2540 - hypothetical protein, at 2,684,556 to 2,684,810
_2540
HP15_2539: HP15_2539 - acyl-CoA dehydrogenase domain protein, at 2,684,790 to 2,685,950
_2539
HP15_2541: HP15_2541 - enoyl-CoA hydratase/isomerase family protein, at 2,685,973 to 2,686,794
_2541
HP15_2542: HP15_2542 - methylcrotonoyl-coenzyme A carboxylase 1 (alpha), at 2,686,950 to 2,688,920
_2542
Position (kb)
2684
2685
2686 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2683.862 kb on - strand, within HP15_2538 at 2683.928 kb on + strand, within HP15_2538 at 2683.959 kb on - strand, within HP15_2538 at 2684.221 kb on - strand, within HP15_2538 at 2684.222 kb on + strand, within HP15_2538 at 2684.227 kb on + strand, within HP15_2538 at 2684.271 kb on + strand at 2684.279 kb on - strand at 2684.537 kb on + strand at 2684.810 kb on - strand at 2684.978 kb on + strand, within HP15_2539 at 2684.986 kb on - strand, within HP15_2539 at 2685.067 kb on + strand, within HP15_2539 at 2685.244 kb on + strand, within HP15_2539 at 2685.389 kb on - strand, within HP15_2539 at 2685.455 kb on - strand, within HP15_2539 at 2685.518 kb on + strand, within HP15_2539 at 2685.526 kb on - strand, within HP15_2539 at 2685.526 kb on - strand, within HP15_2539 at 2685.720 kb on + strand, within HP15_2539 at 2685.720 kb on + strand, within HP15_2539 at 2685.797 kb on + strand, within HP15_2539 at 2685.872 kb on - strand at 2685.917 kb on + strand at 2685.967 kb on - strand at 2685.978 kb on - strand at 2686.099 kb on + strand, within HP15_2541 at 2686.164 kb on + strand, within HP15_2541 at 2686.164 kb on + strand, within HP15_2541 at 2686.224 kb on + strand, within HP15_2541 at 2686.251 kb on + strand, within HP15_2541 at 2686.281 kb on + strand, within HP15_2541 at 2686.300 kb on - strand, within HP15_2541 at 2686.327 kb on + strand, within HP15_2541 at 2686.335 kb on - strand, within HP15_2541 at 2686.335 kb on - strand, within HP15_2541 at 2686.491 kb on + strand, within HP15_2541 at 2686.650 kb on - strand, within HP15_2541 at 2686.652 kb on + strand, within HP15_2541 at 2686.683 kb on + strand, within HP15_2541 at 2686.749 kb on - strand at 2686.904 kb on + strand at 2686.912 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 2,683,862 - HP15_2538 0.66 +0.1 2,683,928 + HP15_2538 0.70 +0.4 2,683,959 - HP15_2538 0.72 +1.0 2,684,221 - HP15_2538 0.88 -0.5 2,684,222 + HP15_2538 0.88 -0.3 2,684,227 + HP15_2538 0.88 +0.7 2,684,271 + +0.1 2,684,279 - +0.3 2,684,537 + -0.7 2,684,810 - +0.1 2,684,978 + HP15_2539 0.16 +1.3 2,684,986 - HP15_2539 0.17 +0.6 2,685,067 + HP15_2539 0.24 +1.7 2,685,244 + HP15_2539 0.39 -1.1 2,685,389 - HP15_2539 0.52 -1.3 2,685,455 - HP15_2539 0.57 -0.6 2,685,518 + HP15_2539 0.63 -0.4 2,685,526 - HP15_2539 0.63 +0.8 2,685,526 - HP15_2539 0.63 +1.1 2,685,720 + HP15_2539 0.80 -1.9 2,685,720 + HP15_2539 0.80 -0.4 2,685,797 + HP15_2539 0.87 -0.6 2,685,872 - +2.9 2,685,917 + +0.1 2,685,967 - -0.1 2,685,978 - +1.0 2,686,099 + HP15_2541 0.15 -0.6 2,686,164 + HP15_2541 0.23 +1.5 2,686,164 + HP15_2541 0.23 +1.1 2,686,224 + HP15_2541 0.31 +0.1 2,686,251 + HP15_2541 0.34 -0.5 2,686,281 + HP15_2541 0.37 +1.1 2,686,300 - HP15_2541 0.40 -0.0 2,686,327 + HP15_2541 0.43 -0.5 2,686,335 - HP15_2541 0.44 -0.2 2,686,335 - HP15_2541 0.44 -0.2 2,686,491 + HP15_2541 0.63 +1.0 2,686,650 - HP15_2541 0.82 -0.0 2,686,652 + HP15_2541 0.83 -0.1 2,686,683 + HP15_2541 0.86 +1.3 2,686,749 - -0.3 2,686,904 + +0.3 2,686,912 - -0.3
Or see this region's nucleotide sequence