Strain Fitness in Marinobacter adhaerens HP15 around HP15_1309

Experiment: m.b. Zinc 0.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1307 and HP15_1308 are separated by 0 nucleotidesHP15_1308 and HP15_1309 are separated by 50 nucleotidesHP15_1309 and HP15_1310 are separated by 120 nucleotides HP15_1307: HP15_1307 - N-acetyl-anhydromuranmyl-L-alanine amidase, at 1,367,759 to 1,368,385 _1307 HP15_1308: HP15_1308 - signaling modulator of AmpD, AmpE, at 1,368,386 to 1,368,901 _1308 HP15_1309: HP15_1309 - signaling modulator of AmpD, AmpE, at 1,368,952 to 1,369,272 _1309 HP15_1310: HP15_1310 - methyl-accepting chemotaxis sensory transducer, at 1,369,393 to 1,371,423 _1310 Position (kb) 1368 1369 1370Strain fitness (log2 ratio) -1 0 1at 1368.347 kb on + strandat 1368.438 kb on + strand, within HP15_1308at 1368.463 kb on + strand, within HP15_1308at 1368.471 kb on - strand, within HP15_1308at 1368.504 kb on - strand, within HP15_1308at 1368.692 kb on - strand, within HP15_1308at 1368.719 kb on + strand, within HP15_1308at 1368.719 kb on + strand, within HP15_1308at 1368.750 kb on - strand, within HP15_1308at 1368.793 kb on + strand, within HP15_1308at 1368.799 kb on + strand, within HP15_1308at 1368.799 kb on + strand, within HP15_1308at 1368.799 kb on + strand, within HP15_1308at 1368.807 kb on - strand, within HP15_1308at 1368.851 kb on + strandat 1368.888 kb on - strandat 1369.156 kb on + strand, within HP15_1309at 1369.521 kb on + strandat 1369.539 kb on - strandat 1369.712 kb on + strand, within HP15_1310at 1369.761 kb on - strand, within HP15_1310at 1369.779 kb on - strand, within HP15_1310at 1369.872 kb on + strand, within HP15_1310at 1369.952 kb on - strand, within HP15_1310at 1369.953 kb on - strand, within HP15_1310at 1369.953 kb on - strand, within HP15_1310at 1370.048 kb on - strand, within HP15_1310at 1370.055 kb on - strand, within HP15_1310at 1370.109 kb on - strand, within HP15_1310at 1370.272 kb on - strand, within HP15_1310

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM
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1,368,347 + +1.1
1,368,438 + HP15_1308 0.10 +0.2
1,368,463 + HP15_1308 0.15 -0.2
1,368,471 - HP15_1308 0.16 +1.0
1,368,504 - HP15_1308 0.23 -0.3
1,368,692 - HP15_1308 0.59 +0.3
1,368,719 + HP15_1308 0.65 -0.1
1,368,719 + HP15_1308 0.65 -1.5
1,368,750 - HP15_1308 0.71 +0.7
1,368,793 + HP15_1308 0.79 +0.4
1,368,799 + HP15_1308 0.80 -0.3
1,368,799 + HP15_1308 0.80 -0.1
1,368,799 + HP15_1308 0.80 -0.9
1,368,807 - HP15_1308 0.82 -1.0
1,368,851 + -0.1
1,368,888 - -0.1
1,369,156 + HP15_1309 0.64 -1.5
1,369,521 + +0.6
1,369,539 - -0.4
1,369,712 + HP15_1310 0.16 +0.2
1,369,761 - HP15_1310 0.18 -0.5
1,369,779 - HP15_1310 0.19 -1.6
1,369,872 + HP15_1310 0.24 -0.9
1,369,952 - HP15_1310 0.28 -0.8
1,369,953 - HP15_1310 0.28 -0.0
1,369,953 - HP15_1310 0.28 -0.3
1,370,048 - HP15_1310 0.32 -0.1
1,370,055 - HP15_1310 0.33 -0.0
1,370,109 - HP15_1310 0.35 +1.2
1,370,272 - HP15_1310 0.43 +0.8

Or see this region's nucleotide sequence