Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1254 and HP15_1255 are separated by 170 nucleotides HP15_1255 and HP15_1256 are separated by 63 nucleotides HP15_1256 and HP15_1257 are separated by 80 nucleotides HP15_1257 and HP15_1258 are separated by 1 nucleotides
HP15_1254: HP15_1254 - cyclic nucleotide-binding domain (cNMP-BD) protein, at 1,313,697 to 1,315,613
_1254
HP15_1255: HP15_1255 - protein containing Smr protein/MutS2 C-terminal domain, at 1,315,784 to 1,316,365
_1255
HP15_1256: HP15_1256 - conserved hypothetical protein, at 1,316,429 to 1,316,620
_1256
HP15_1257: HP15_1257 - (2Fe-2S)-binding domain protein, at 1,316,701 to 1,317,186
_1257
HP15_1258: HP15_1258 - isoquinoline 1-oxidoreductase, beta subunit, at 1,317,188 to 1,319,392
_1258
Position (kb)
1315
1316
1317 Strain fitness (log2 ratio)
-1
0
1
2 at 1315.033 kb on + strand, within HP15_1254 at 1315.082 kb on - strand, within HP15_1254 at 1315.122 kb on + strand, within HP15_1254 at 1315.135 kb on + strand, within HP15_1254 at 1315.224 kb on + strand, within HP15_1254 at 1315.244 kb on + strand, within HP15_1254 at 1315.252 kb on - strand, within HP15_1254 at 1315.252 kb on - strand, within HP15_1254 at 1315.454 kb on + strand at 1315.460 kb on - strand at 1315.479 kb on - strand at 1315.479 kb on - strand at 1315.489 kb on - strand at 1315.608 kb on + strand at 1315.643 kb on - strand at 1315.919 kb on + strand, within HP15_1255 at 1315.988 kb on + strand, within HP15_1255 at 1315.996 kb on - strand, within HP15_1255 at 1316.072 kb on + strand, within HP15_1255 at 1316.075 kb on - strand, within HP15_1255 at 1316.080 kb on + strand, within HP15_1255 at 1316.080 kb on - strand, within HP15_1255 at 1316.088 kb on + strand, within HP15_1255 at 1316.096 kb on - strand, within HP15_1255 at 1316.096 kb on - strand, within HP15_1255 at 1316.113 kb on + strand, within HP15_1255 at 1316.182 kb on + strand, within HP15_1255 at 1316.187 kb on + strand, within HP15_1255 at 1316.239 kb on + strand, within HP15_1255 at 1316.249 kb on + strand, within HP15_1255 at 1316.356 kb on - strand at 1316.360 kb on + strand at 1316.368 kb on - strand at 1316.513 kb on + strand, within HP15_1256 at 1316.560 kb on + strand, within HP15_1256 at 1316.581 kb on + strand, within HP15_1256 at 1316.627 kb on + strand at 1316.693 kb on + strand at 1316.837 kb on - strand, within HP15_1257 at 1316.876 kb on + strand, within HP15_1257 at 1317.015 kb on + strand, within HP15_1257 at 1317.018 kb on - strand, within HP15_1257 at 1317.222 kb on + strand at 1317.224 kb on + strand at 1317.296 kb on - strand at 1317.362 kb on + strand at 1317.363 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,315,033 + HP15_1254 0.70 -1.0 1,315,082 - HP15_1254 0.72 -0.3 1,315,122 + HP15_1254 0.74 -0.4 1,315,135 + HP15_1254 0.75 +0.4 1,315,224 + HP15_1254 0.80 -0.5 1,315,244 + HP15_1254 0.81 +1.5 1,315,252 - HP15_1254 0.81 -0.5 1,315,252 - HP15_1254 0.81 +0.6 1,315,454 + +0.5 1,315,460 - -0.6 1,315,479 - +0.7 1,315,479 - +0.1 1,315,489 - -0.8 1,315,608 + -0.4 1,315,643 - +0.1 1,315,919 + HP15_1255 0.23 -1.0 1,315,988 + HP15_1255 0.35 +0.3 1,315,996 - HP15_1255 0.36 +0.9 1,316,072 + HP15_1255 0.49 -0.2 1,316,075 - HP15_1255 0.50 -0.9 1,316,080 + HP15_1255 0.51 -0.8 1,316,080 - HP15_1255 0.51 -1.5 1,316,088 + HP15_1255 0.52 +0.1 1,316,096 - HP15_1255 0.54 -0.5 1,316,096 - HP15_1255 0.54 +2.1 1,316,113 + HP15_1255 0.57 -0.0 1,316,182 + HP15_1255 0.68 +2.7 1,316,187 + HP15_1255 0.69 -1.0 1,316,239 + HP15_1255 0.78 +0.9 1,316,249 + HP15_1255 0.80 -0.4 1,316,356 - -0.2 1,316,360 + -0.5 1,316,368 - +0.8 1,316,513 + HP15_1256 0.44 -1.4 1,316,560 + HP15_1256 0.68 -0.2 1,316,581 + HP15_1256 0.79 -0.5 1,316,627 + -0.1 1,316,693 + -0.4 1,316,837 - HP15_1257 0.28 -1.3 1,316,876 + HP15_1257 0.36 +0.2 1,317,015 + HP15_1257 0.65 +1.3 1,317,018 - HP15_1257 0.65 -0.6 1,317,222 + -0.2 1,317,224 + +0.9 1,317,296 - -0.3 1,317,362 + +0.2 1,317,363 + +0.7
Or see this region's nucleotide sequence