Experiment: m.b. Zinc 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_996 and HP15_997 are separated by 18 nucleotides HP15_997 and HP15_998 are separated by 21 nucleotides HP15_998 and HP15_999 are separated by 251 nucleotides
HP15_996: HP15_996 - sugar efflux permease, MFS-like protein, at 1,004,050 to 1,005,321
_996
HP15_997: HP15_997 - conserved hypothetical protein, at 1,005,340 to 1,007,325
_997
HP15_998: HP15_998 - conserved hypothetical protein, at 1,007,347 to 1,007,934
_998
HP15_999: HP15_999 - acyl-CoA synthase, at 1,008,186 to 1,009,832
_999
Position (kb)
1005
1006
1007
1008 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1004.365 kb on - strand, within HP15_996 at 1004.383 kb on + strand, within HP15_996 at 1004.383 kb on + strand, within HP15_996 at 1004.391 kb on - strand, within HP15_996 at 1004.522 kb on + strand, within HP15_996 at 1004.530 kb on + strand, within HP15_996 at 1004.622 kb on - strand, within HP15_996 at 1004.678 kb on - strand, within HP15_996 at 1004.850 kb on - strand, within HP15_996 at 1004.945 kb on + strand, within HP15_996 at 1004.967 kb on + strand, within HP15_996 at 1004.968 kb on + strand, within HP15_996 at 1004.987 kb on + strand, within HP15_996 at 1005.026 kb on - strand, within HP15_996 at 1005.038 kb on + strand, within HP15_996 at 1005.051 kb on - strand, within HP15_996 at 1005.077 kb on - strand, within HP15_996 at 1005.149 kb on - strand, within HP15_996 at 1005.149 kb on - strand, within HP15_996 at 1005.163 kb on - strand, within HP15_996 at 1005.238 kb on - strand at 1005.328 kb on - strand at 1005.345 kb on - strand at 1005.353 kb on - strand at 1005.457 kb on - strand at 1005.556 kb on + strand, within HP15_997 at 1005.756 kb on + strand, within HP15_997 at 1005.848 kb on - strand, within HP15_997 at 1005.965 kb on + strand, within HP15_997 at 1005.973 kb on - strand, within HP15_997 at 1005.973 kb on - strand, within HP15_997 at 1006.011 kb on + strand, within HP15_997 at 1006.021 kb on + strand, within HP15_997 at 1006.029 kb on - strand, within HP15_997 at 1006.046 kb on + strand, within HP15_997 at 1006.051 kb on + strand, within HP15_997 at 1006.137 kb on + strand, within HP15_997 at 1006.137 kb on + strand, within HP15_997 at 1006.140 kb on - strand, within HP15_997 at 1006.210 kb on + strand, within HP15_997 at 1006.421 kb on + strand, within HP15_997 at 1006.421 kb on + strand, within HP15_997 at 1006.425 kb on + strand, within HP15_997 at 1006.429 kb on - strand, within HP15_997 at 1006.439 kb on - strand, within HP15_997 at 1006.556 kb on - strand, within HP15_997 at 1006.613 kb on - strand, within HP15_997 at 1006.739 kb on + strand, within HP15_997 at 1006.765 kb on - strand, within HP15_997 at 1006.795 kb on + strand, within HP15_997 at 1006.797 kb on + strand, within HP15_997 at 1007.001 kb on - strand, within HP15_997 at 1007.065 kb on + strand, within HP15_997 at 1007.211 kb on - strand at 1007.213 kb on - strand at 1007.232 kb on + strand at 1007.335 kb on - strand at 1007.336 kb on + strand at 1007.344 kb on - strand at 1007.446 kb on - strand, within HP15_998 at 1007.602 kb on - strand, within HP15_998 at 1007.727 kb on + strand, within HP15_998 at 1007.796 kb on + strand, within HP15_998 at 1007.838 kb on + strand, within HP15_998 at 1007.865 kb on - strand, within HP15_998 at 1007.955 kb on + strand at 1008.038 kb on - strand at 1008.272 kb on + strand at 1008.303 kb on - strand at 1008.310 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.5 mM remove 1,004,365 - HP15_996 0.25 -1.8 1,004,383 + HP15_996 0.26 +1.0 1,004,383 + HP15_996 0.26 -1.0 1,004,391 - HP15_996 0.27 +0.9 1,004,522 + HP15_996 0.37 -0.3 1,004,530 + HP15_996 0.38 +0.3 1,004,622 - HP15_996 0.45 -0.6 1,004,678 - HP15_996 0.49 +0.8 1,004,850 - HP15_996 0.63 +1.1 1,004,945 + HP15_996 0.70 -0.3 1,004,967 + HP15_996 0.72 -0.8 1,004,968 + HP15_996 0.72 +0.3 1,004,987 + HP15_996 0.74 -1.1 1,005,026 - HP15_996 0.77 -0.7 1,005,038 + HP15_996 0.78 +0.8 1,005,051 - HP15_996 0.79 +0.3 1,005,077 - HP15_996 0.81 -0.0 1,005,149 - HP15_996 0.86 -0.5 1,005,149 - HP15_996 0.86 -1.2 1,005,163 - HP15_996 0.88 +0.2 1,005,238 - +1.3 1,005,328 - -1.3 1,005,345 - -0.9 1,005,353 - +0.2 1,005,457 - -0.4 1,005,556 + HP15_997 0.11 -0.9 1,005,756 + HP15_997 0.21 -0.2 1,005,848 - HP15_997 0.26 +0.8 1,005,965 + HP15_997 0.31 -1.3 1,005,973 - HP15_997 0.32 +1.0 1,005,973 - HP15_997 0.32 -0.1 1,006,011 + HP15_997 0.34 -0.9 1,006,021 + HP15_997 0.34 +0.8 1,006,029 - HP15_997 0.35 +1.8 1,006,046 + HP15_997 0.36 -0.5 1,006,051 + HP15_997 0.36 +0.1 1,006,137 + HP15_997 0.40 -0.2 1,006,137 + HP15_997 0.40 -0.0 1,006,140 - HP15_997 0.40 +0.5 1,006,210 + HP15_997 0.44 -0.8 1,006,421 + HP15_997 0.54 -0.1 1,006,421 + HP15_997 0.54 -0.3 1,006,425 + HP15_997 0.55 -0.6 1,006,429 - HP15_997 0.55 -0.5 1,006,439 - HP15_997 0.55 -0.1 1,006,556 - HP15_997 0.61 +1.2 1,006,613 - HP15_997 0.64 -0.7 1,006,739 + HP15_997 0.70 -0.6 1,006,765 - HP15_997 0.72 +0.6 1,006,795 + HP15_997 0.73 -0.4 1,006,797 + HP15_997 0.73 +0.2 1,007,001 - HP15_997 0.84 -0.2 1,007,065 + HP15_997 0.87 +0.7 1,007,211 - -0.7 1,007,213 - -2.1 1,007,232 + +0.8 1,007,335 - +0.1 1,007,336 + -1.1 1,007,344 - -0.5 1,007,446 - HP15_998 0.17 -0.1 1,007,602 - HP15_998 0.43 +1.3 1,007,727 + HP15_998 0.65 +0.8 1,007,796 + HP15_998 0.76 +0.9 1,007,838 + HP15_998 0.84 +0.2 1,007,865 - HP15_998 0.88 +0.9 1,007,955 + +0.6 1,008,038 - -1.2 1,008,272 + +0.6 1,008,303 - -1.2 1,008,310 + -0.1
Or see this region's nucleotide sequence