Strain Fitness in Shewanella amazonensis SB2B around Sama_2929

Experiment: NAG (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N)
3,482,036	+				-2.9
3,482,046	+				-1.9
3,482,046	+				-1.5
3,482,047	-				+0.9
3,482,053	-				-1.6
3,482,090	+				+0.4
3,482,090	+				-2.7
3,482,090	+				-1.0
3,482,090	+				-0.7
3,482,090	+				-1.7
3,482,091	-				-0.7
3,482,091	-				-0.1
3,482,091	-				-3.1
3,482,096	-				-3.1
3,482,175	+		Sama_2928	0.12	-2.5
3,482,175	+		Sama_2928	0.12	-2.6
3,482,175	+		Sama_2928	0.12	-2.6
3,482,176	-		Sama_2928	0.12	-0.6
3,482,238	+		Sama_2928	0.19	-1.3
3,482,239	-		Sama_2928	0.19	-1.5
3,482,239	-		Sama_2928	0.19	-0.1
3,482,267	+		Sama_2928	0.22	-0.1
3,482,267	+		Sama_2928	0.22	-0.6
3,482,267	+		Sama_2928	0.22	-1.2
3,482,268	-		Sama_2928	0.22	-2.4
3,482,423	+		Sama_2928	0.40	-1.2
3,482,423	+		Sama_2928	0.40	-2.7
3,482,424	-		Sama_2928	0.40	-1.1
3,482,437	+		Sama_2928	0.41	-0.6
3,482,438	-		Sama_2928	0.41	-0.9
3,482,438	-		Sama_2928	0.41	-2.6
3,482,438	-		Sama_2928	0.41	-1.9
3,482,568	+		Sama_2928	0.56	-2.3
3,482,568	+		Sama_2928	0.56	-3.2
3,482,568	+		Sama_2928	0.56	-2.4
3,482,644	+		Sama_2928	0.65	-2.1
3,482,645	-		Sama_2928	0.65	-3.4
3,482,645	-		Sama_2928	0.65	+0.0
3,482,645	-		Sama_2928	0.65	+0.3
3,482,645	-		Sama_2928	0.65	-3.0
3,482,663	+		Sama_2928	0.67	-1.6
3,482,752	+		Sama_2928	0.77	-2.5
3,482,752	+		Sama_2928	0.77	-0.7
3,482,753	-		Sama_2928	0.77	-1.4
3,482,773	+		Sama_2928	0.79	-2.1
3,482,773	+		Sama_2928	0.79	-3.0
3,482,787	+		Sama_2928	0.81	-2.1
3,482,787	+		Sama_2928	0.81	-0.7
3,482,787	+		Sama_2928	0.81	+0.8
3,482,788	-		Sama_2928	0.81	-0.6
3,482,798	+		Sama_2928	0.82	-1.5
3,482,798	+		Sama_2928	0.82	-0.5
3,482,798	+		Sama_2928	0.82	-0.7
3,482,798	+		Sama_2928	0.82	-0.7
3,482,798	+		Sama_2928	0.82	+0.5
3,482,798	+		Sama_2928	0.82	-2.5
3,482,798	+		Sama_2928	0.82	-0.6
3,482,798	+		Sama_2928	0.82	-2.7
3,482,798	+		Sama_2928	0.82	-1.9
3,482,798	+		Sama_2928	0.82	-3.0
3,482,798	+		Sama_2928	0.82	+0.1
3,482,798	+		Sama_2928	0.82	-3.4
3,482,798	+		Sama_2928	0.82	-2.2
3,482,798	+		Sama_2928	0.82	-2.2
3,482,798	+		Sama_2928	0.82	-0.3
3,482,798	+		Sama_2928	0.82	-1.6
3,482,798	+		Sama_2928	0.82	-2.5
3,482,799	-		Sama_2928	0.82	-2.6
3,482,799	-		Sama_2928	0.82	-2.6
3,482,799	-		Sama_2928	0.82	-2.1
3,482,799	-		Sama_2928	0.82	-1.5
3,482,800	+		Sama_2928	0.82	-2.6
3,482,801	-		Sama_2928	0.82	-2.0
3,482,801	-		Sama_2928	0.82	-1.8
3,482,877	+				-3.4
3,482,925	+				-2.5
3,482,957	+				-1.4
3,482,957	+				-2.6
3,482,958	-				+0.4
3,482,958	-				-2.5
3,482,968	+				-1.5
3,482,968	+				-0.6
3,482,968	+				-0.8
3,482,969	-				+1.6
3,482,969	-				-0.0
3,482,969	-				+0.1
3,482,969	-				+1.4
3,482,969	-				+0.2
3,482,969	-				-1.0
3,482,969	-				-3.3
3,483,024	+				-1.4
3,483,024	+				-0.6
3,483,032	+				-1.1
3,483,033	-				-0.0
3,483,033	-				-1.2
3,483,033	-				+0.1
3,483,037	+				-0.2
3,483,037	+				-0.6
3,483,038	-				-1.4
3,483,038	-				-0.6
3,483,038	-				+3.6
3,483,042	+				-1.0
3,483,042	+				+3.3
3,483,043	-				+0.1
3,483,051	+				+0.4
3,483,051	+				-1.0
3,483,087	+				+0.2
3,483,087	+				-0.0
3,483,087	+				-0.2
3,483,088	-				-0.7
3,483,088	-				-1.1
3,483,088	-				+0.3
3,483,088	-				-0.9
3,483,096	+				-1.4
3,483,096	+				+0.9
3,483,097	-				-0.3
3,483,097	-				-0.1
3,483,097	-				-1.7
3,483,097	-				-0.8
3,483,132	+		Sama_2929	0.13	+0.2
3,483,133	-		Sama_2929	0.13	+0.3
3,483,133	-		Sama_2929	0.13	-1.1
3,483,148	+		Sama_2929	0.15	+0.3
3,483,148	+		Sama_2929	0.15	+1.5
3,483,149	-		Sama_2929	0.15	-1.4
3,483,172	+		Sama_2929	0.18	+2.0
3,483,173	-		Sama_2929	0.18	-1.3
3,483,173	-		Sama_2929	0.18	-1.0
3,483,173	-		Sama_2929	0.18	-0.3
3,483,173	-		Sama_2929	0.18	+0.8
3,483,173	-		Sama_2929	0.18	-0.2
3,483,174	+		Sama_2929	0.19	-0.9
3,483,175	-		Sama_2929	0.19	-1.7
3,483,175	-		Sama_2929	0.19	+2.6
3,483,175	-		Sama_2929	0.19	+1.0
3,483,175	-		Sama_2929	0.19	-0.2
3,483,175	-		Sama_2929	0.19	+0.3
3,483,176	+		Sama_2929	0.19	-0.7
3,483,177	-		Sama_2929	0.19	-0.6
3,483,188	-		Sama_2929	0.20	+0.1
3,483,190	+		Sama_2929	0.20	-1.7
3,483,191	-		Sama_2929	0.21	-1.4
3,483,211	-		Sama_2929	0.23	+0.5
3,483,247	-		Sama_2929	0.27	-0.3
3,483,287	+		Sama_2929	0.32	-0.4
3,483,287	+		Sama_2929	0.32	+0.2
3,483,287	+		Sama_2929	0.32	-1.1
3,483,287	+		Sama_2929	0.32	+1.6
3,483,287	+		Sama_2929	0.32	-0.6
3,483,288	-		Sama_2929	0.32	+0.9
3,483,288	-		Sama_2929	0.32	-1.2
3,483,288	-		Sama_2929	0.32	+0.2
3,483,288	-		Sama_2929	0.32	+5.5
3,483,288	-		Sama_2929	0.32	+0.0
3,483,288	-		Sama_2929	0.32	-1.2
3,483,288	-		Sama_2929	0.32	+0.7
3,483,291	+		Sama_2929	0.33	+0.1
3,483,291	+		Sama_2929	0.33	-0.1
3,483,291	+		Sama_2929	0.33	+0.6
3,483,291	+		Sama_2929	0.33	-0.7
3,483,292	-		Sama_2929	0.33	-0.3
3,483,292	-		Sama_2929	0.33	-1.4
3,483,292	-		Sama_2929	0.33	-1.8
3,483,292	-		Sama_2929	0.33	-1.1
3,483,292	-		Sama_2929	0.33	-0.5
3,483,348	+		Sama_2929	0.40	-2.1
3,483,390	+		Sama_2929	0.45	-0.3
3,483,390	+		Sama_2929	0.45	-0.7
3,483,390	+		Sama_2929	0.45	+0.5
3,483,390	+		Sama_2929	0.45	-2.2
3,483,390	+		Sama_2929	0.45	-0.8
3,483,390	+		Sama_2929	0.45	+0.7
3,483,390	+		Sama_2929	0.45	-0.3
3,483,390	+		Sama_2929	0.45	-2.2
3,483,390	+		Sama_2929	0.45	-0.3
3,483,391	-		Sama_2929	0.45	-0.9
3,483,391	-		Sama_2929	0.45	-0.8
3,483,391	-		Sama_2929	0.45	+2.7
3,483,391	-		Sama_2929	0.45	-1.7
3,483,391	-		Sama_2929	0.45	-0.1
3,483,391	-		Sama_2929	0.45	-0.3
3,483,391	-		Sama_2929	0.45	+0.0
3,483,393	+		Sama_2929	0.45	-0.7
3,483,393	+		Sama_2929	0.45	+2.1
3,483,393	+		Sama_2929	0.45	+0.7
3,483,438	+		Sama_2929	0.51	-0.1
3,483,438	+		Sama_2929	0.51	-1.4
3,483,493	+		Sama_2929	0.58	-0.4
3,483,494	-		Sama_2929	0.58	-0.9
3,483,494	-		Sama_2929	0.58	-0.8
3,483,494	-		Sama_2929	0.58	+0.3
3,483,494	-		Sama_2929	0.58	-2.7
3,483,503	-		Sama_2929	0.59	+0.4
3,483,570	+		Sama_2929	0.67	+2.6
3,483,570	+		Sama_2929	0.67	-1.1
3,483,570	+		Sama_2929	0.67	-1.0
3,483,570	+		Sama_2929	0.67	-1.2
3,483,570	+		Sama_2929	0.67	-1.9
3,483,570	+		Sama_2929	0.67	-1.7
3,483,570	+		Sama_2929	0.67	-1.1
3,483,570	+		Sama_2929	0.67	+1.0
3,483,571	-		Sama_2929	0.67	-0.1
3,483,571	-		Sama_2929	0.67	-0.4
3,483,573	+		Sama_2929	0.67	-0.7
3,483,573	+		Sama_2929	0.67	+0.1
3,483,573	+		Sama_2929	0.67	-0.1
3,483,574	-		Sama_2929	0.68	+0.0
3,483,574	-		Sama_2929	0.68	-0.5
3,483,574	-		Sama_2929	0.68	-1.5
3,483,592	+		Sama_2929	0.70	+0.6
3,483,593	-		Sama_2929	0.70	-0.6
3,483,593	-		Sama_2929	0.70	-1.1
3,483,636	+		Sama_2929	0.75	+2.5
3,483,636	+		Sama_2929	0.75	-0.7
3,483,636	+		Sama_2929	0.75	+0.3
3,483,636	+		Sama_2929	0.75	-0.6
3,483,636	+		Sama_2929	0.75	-0.8
3,483,636	+		Sama_2929	0.75	+0.2
3,483,636	+		Sama_2929	0.75	+2.6
3,483,636	+		Sama_2929	0.75	-1.4
3,483,636	+		Sama_2929	0.75	+2.6
3,483,637	-		Sama_2929	0.75	+0.5
3,483,637	-		Sama_2929	0.75	+0.1
3,483,637	-		Sama_2929	0.75	+2.7
3,483,637	-		Sama_2929	0.75	+3.1
3,483,637	-		Sama_2929	0.75	-0.3
3,483,637	-		Sama_2929	0.75	+1.1
3,483,637	-		Sama_2929	0.75	-0.3
3,483,637	-		Sama_2929	0.75	-1.9
3,483,637	-		Sama_2929	0.75	-2.0
3,483,637	-		Sama_2929	0.75	+0.7
3,483,637	-		Sama_2929	0.75	-0.9
3,483,637	-		Sama_2929	0.75	-1.5
3,483,637	-		Sama_2929	0.75	-0.1
3,483,637	-		Sama_2929	0.75	+0.1
3,483,637	-		Sama_2929	0.75	-1.1
3,483,637	-		Sama_2929	0.75	-1.2
3,483,637	-		Sama_2929	0.75	-1.4
3,483,637	-		Sama_2929	0.75	-0.6
3,483,637	-		Sama_2929	0.75	+0.2
3,483,637	-		Sama_2929	0.75	-1.5
3,483,637	-		Sama_2929	0.75	-0.0
3,483,637	-		Sama_2929	0.75	+0.2
3,483,640	+		Sama_2929	0.76	-0.2
3,483,641	-		Sama_2929	0.76	+1.5
3,483,641	-		Sama_2929	0.76	+0.5
3,483,649	+		Sama_2929	0.77	+0.8
3,483,649	+		Sama_2929	0.77	+2.0
3,483,650	-		Sama_2929	0.77	+0.3
3,483,819	-				+3.2
3,483,826	+				-2.4
3,483,826	+				-0.6
3,483,826	+				-1.4
3,483,826	+				-0.4
3,483,826	+				-1.4
3,483,826	+				-0.1
3,483,826	+				+0.2
3,483,826	+				-1.6
3,483,826	+				+0.1
3,483,827	-				+0.4
3,483,827	-				-0.6
3,483,827	-				-0.0
3,483,827	-				-0.3
3,483,827	-				-0.3
3,483,827	-				+1.7
3,483,827	-				+0.4
3,483,827	-				+0.2
3,483,827	-				-1.1
3,483,827	-				+0.5
3,483,841	+				-0.2
3,483,907	+				-0.3
3,483,908	-				-0.6
3,483,908	-				-2.0
3,483,908	-				+0.4
3,483,908	-				-1.2
3,483,910	+				-0.9
3,483,910	+				+3.6
3,483,910	+				+0.5
3,483,979	+		Sama_2930	0.16	-0.1
3,484,071	-		Sama_2930	0.29	+0.2
3,484,071	-		Sama_2930	0.29	+2.0
3,484,116	-		Sama_2930	0.35	-1.7
3,484,123	+		Sama_2930	0.36	-0.9
3,484,123	+		Sama_2930	0.36	-2.0
3,484,123	+		Sama_2930	0.36	-0.4
3,484,124	-		Sama_2930	0.36	+1.4
3,484,124	-		Sama_2930	0.36	+0.9
3,484,222	+		Sama_2930	0.49	-0.2
3,484,222	+		Sama_2930	0.49	-1.1
3,484,223	-		Sama_2930	0.49	-2.7
3,484,223	-		Sama_2930	0.49	+0.2
3,484,246	+		Sama_2930	0.52	-0.3
3,484,246	+		Sama_2930	0.52	+1.2
3,484,246	+		Sama_2930	0.52	+0.6
3,484,246	+		Sama_2930	0.52	-0.6
3,484,246	+		Sama_2930	0.52	+1.8
3,484,247	-		Sama_2930	0.52	-0.6
3,484,247	-		Sama_2930	0.52	-0.1
3,484,275	-		Sama_2930	0.56	-2.0
3,484,283	-		Sama_2930	0.57	-0.8
3,484,285	+		Sama_2930	0.58	+0.1
3,484,285	+		Sama_2930	0.58	-0.5
3,484,409	-		Sama_2930	0.74	+3.4
3,484,409	-		Sama_2930	0.74	-1.4
3,484,409	-		Sama_2930	0.74	-1.1
3,484,436	-		Sama_2930	0.78	-0.6
3,484,436	-		Sama_2930	0.78	-1.7
3,484,436	-		Sama_2930	0.78	-1.3
3,484,547	+				+0.9
3,484,547	+				+0.0
3,484,555	+				-1.7
3,484,556	-				-1.7
3,484,568	+				-0.7
3,484,569	-				-0.9
3,484,590	+				+0.0
3,484,590	+				-1.7
3,484,590	+				+0.3
3,484,590	+				-1.3
3,484,591	-				-1.5
3,484,591	-				-2.3
3,484,600	+				-0.8
3,484,600	+				+0.8
3,484,600	+				-0.7
3,484,601	-				-0.0
3,484,601	-				+2.3
3,484,601	-				-0.4
3,484,601	-				-0.7
3,484,601	-				-0.9
3,484,601	-				+0.1
3,484,601	-				+1.3
3,484,601	-				-0.3
3,484,601	-				+0.1
3,484,627	+				-0.2
3,484,628	-				-1.5
3,484,628	-				-0.0
3,484,721	+		Sama_2931	0.34	-2.4
3,484,750	+		Sama_2931	0.42	-0.8
3,484,750	+		Sama_2931	0.42	-0.1
3,484,762	+		Sama_2931	0.45	-0.3
3,484,811	+		Sama_2931	0.58	-0.8