Strain Fitness in Shewanella amazonensis SB2B around Sama_1207

Experiment: NAG (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N)
1,479,934	-		Sama_1206	0.53	-1.0
1,479,997	+		Sama_1206	0.56	+0.4
1,480,020	+		Sama_1206	0.57	+0.3
1,480,020	+		Sama_1206	0.57	+1.0
1,480,020	+		Sama_1206	0.57	-0.5
1,480,020	+		Sama_1206	0.57	+0.3
1,480,020	+		Sama_1206	0.57	-1.2
1,480,021	-		Sama_1206	0.57	-0.4
1,480,054	+		Sama_1206	0.59	-0.8
1,480,161	+		Sama_1206	0.64	-0.7
1,480,161	+		Sama_1206	0.64	-1.1
1,480,161	+		Sama_1206	0.64	+0.3
1,480,162	-		Sama_1206	0.64	+0.4
1,480,162	-		Sama_1206	0.64	+2.5
1,480,216	+		Sama_1206	0.67	-1.5
1,480,216	+		Sama_1206	0.67	+1.9
1,480,217	-		Sama_1206	0.67	+1.2
1,480,217	-		Sama_1206	0.67	+1.5
1,480,217	-		Sama_1206	0.67	-1.2
1,480,217	-		Sama_1206	0.67	-2.8
1,480,217	-		Sama_1206	0.67	+0.6
1,480,217	-		Sama_1206	0.67	+1.2
1,480,227	+		Sama_1206	0.67	-0.6
1,480,227	+		Sama_1206	0.67	-0.5
1,480,228	-		Sama_1206	0.67	+2.1
1,480,320	+		Sama_1206	0.72	+0.7
1,480,320	+		Sama_1206	0.72	+0.7
1,480,320	+		Sama_1206	0.72	-0.7
1,480,320	+		Sama_1206	0.72	-1.0
1,480,320	+		Sama_1206	0.72	+1.2
1,480,320	+		Sama_1206	0.72	-2.3
1,480,320	+		Sama_1206	0.72	+0.2
1,480,320	+		Sama_1206	0.72	+0.9
1,480,321	-		Sama_1206	0.72	+0.7
1,480,321	-		Sama_1206	0.72	-0.4
1,480,321	-		Sama_1206	0.72	-0.1
1,480,321	-		Sama_1206	0.72	-0.6
1,480,321	-		Sama_1206	0.72	-0.2
1,480,321	-		Sama_1206	0.72	-1.4
1,480,321	-		Sama_1206	0.72	+0.2
1,480,321	-		Sama_1206	0.72	+0.2
1,480,321	-		Sama_1206	0.72	+0.4
1,480,321	-		Sama_1206	0.72	-1.7
1,480,321	-		Sama_1206	0.72	-0.9
1,480,321	-		Sama_1206	0.72	+0.3
1,480,321	-		Sama_1206	0.72	+0.6
1,480,321	-		Sama_1206	0.72	-0.0
1,480,347	+		Sama_1206	0.73	-2.3
1,480,386	-		Sama_1206	0.75	+0.2
1,480,420	+		Sama_1206	0.76	+1.1
1,480,441	-		Sama_1206	0.77	+1.4
1,480,441	-		Sama_1206	0.77	-0.8
1,480,441	-		Sama_1206	0.77	-1.4
1,480,442	+		Sama_1206	0.78	+1.3
1,480,463	+		Sama_1206	0.79	-0.4
1,480,515	+		Sama_1206	0.81	+1.9
1,480,515	+		Sama_1206	0.81	-2.5
1,480,515	+		Sama_1206	0.81	+0.3
1,480,516	-		Sama_1206	0.81	-1.0
1,480,516	-		Sama_1206	0.81	-0.6
1,480,516	-		Sama_1206	0.81	-1.1
1,480,516	-		Sama_1206	0.81	-1.1
1,480,516	-		Sama_1206	0.81	+1.0
1,480,551	+		Sama_1206	0.83	-1.1
1,480,551	+		Sama_1206	0.83	-1.5
1,480,551	+		Sama_1206	0.83	-0.5
1,480,552	-		Sama_1206	0.83	-0.3
1,480,552	-		Sama_1206	0.83	-0.4
1,480,671	+		Sama_1206	0.89	+3.6
1,480,672	-		Sama_1206	0.89	-0.9
1,480,672	-		Sama_1206	0.89	-2.1
1,480,736	+				+0.2
1,480,736	+				-1.6
1,480,736	+				-2.6
1,480,736	+				-1.1
1,480,736	+				-1.3
1,480,736	+				-1.6
1,480,736	+				-0.4
1,480,737	-				-0.9
1,480,737	-				-0.1
1,480,737	-				-0.0
1,480,737	-				-0.3
1,480,737	-				+0.4
1,480,737	-				+0.4
1,480,737	-				+0.2
1,480,737	-				-0.1
1,480,737	-				-0.9
1,480,737	-				+2.5
1,480,737	-				-2.7
1,480,737	-				-2.3
1,480,737	-				-0.2
1,480,742	+				-0.4
1,480,742	+				+0.4
1,480,743	-				-0.1
1,480,743	-				-1.8
1,480,743	-				-0.4
1,480,743	-				+1.2
1,480,777	+				-1.9
1,480,786	+				+0.4
1,480,839	+				+3.7
1,480,840	-				-1.1
1,480,891	+				+0.2
1,480,891	+				-0.6
1,480,891	+				-0.9
1,480,891	+				-0.9
1,480,891	+				+1.8
1,480,923	+				-0.3
1,481,223	+		Sama_1207	0.31	-2.1
1,481,223	+		Sama_1207	0.31	-2.3
1,481,224	-		Sama_1207	0.31	-1.0
1,481,224	-		Sama_1207	0.31	-0.2
1,481,450	+		Sama_1207	0.54	+1.0
1,481,451	-		Sama_1207	0.54	-0.4
1,481,451	-		Sama_1207	0.54	+3.9
1,481,515	+		Sama_1207	0.60	-0.3
1,481,515	+		Sama_1207	0.60	-0.9
1,481,515	+		Sama_1207	0.60	-1.8
1,481,516	-		Sama_1207	0.61	-2.0
1,481,516	-		Sama_1207	0.61	+4.2
1,481,516	-		Sama_1207	0.61	-1.0
1,481,516	-		Sama_1207	0.61	-1.8
1,481,516	-		Sama_1207	0.61	-2.1
1,481,516	-		Sama_1207	0.61	+0.4
1,481,516	-		Sama_1207	0.61	-0.5
1,481,516	-		Sama_1207	0.61	+3.5
1,481,516	-		Sama_1207	0.61	-0.2
1,481,516	-		Sama_1207	0.61	-0.7
1,481,581	+		Sama_1207	0.67	-0.4
1,481,889	-				-1.2
1,481,889	-				-0.6
1,481,972	+				-0.3
1,481,972	+				+0.7
1,482,059	+				-1.6
1,482,059	+				-1.4
1,482,059	+				-2.8
1,482,059	+				-0.6
1,482,060	-				+0.5
1,482,060	-				-1.8
1,482,060	-				-0.5
1,482,130	-				-0.7
1,482,155	+				+1.3
1,482,156	-				-0.9
1,482,156	-				-0.3
1,482,160	-				+0.8
1,482,160	-				-0.8
1,482,308	+		Sama_1208	0.17	+2.3
1,482,308	+		Sama_1208	0.17	+0.4
1,482,308	+		Sama_1208	0.17	+0.5
1,482,308	+		Sama_1208	0.17	-0.2
1,482,308	+		Sama_1208	0.17	-0.8
1,482,308	+		Sama_1208	0.17	+0.4
1,482,308	+		Sama_1208	0.17	-0.2
1,482,308	+		Sama_1208	0.17	-0.9
1,482,309	-		Sama_1208	0.17	+0.0
1,482,309	-		Sama_1208	0.17	-1.2
1,482,309	-		Sama_1208	0.17	+2.7
1,482,309	-		Sama_1208	0.17	+0.2
1,482,309	-		Sama_1208	0.17	-1.4
1,482,309	-		Sama_1208	0.17	+1.0
1,482,309	-		Sama_1208	0.17	-0.2
1,482,312	+		Sama_1208	0.17	-1.0
1,482,312	+		Sama_1208	0.17	-0.1
1,482,313	-		Sama_1208	0.17	+0.8
1,482,313	-		Sama_1208	0.17	+0.6
1,482,313	-		Sama_1208	0.17	+1.0
1,482,313	-		Sama_1208	0.17	-1.2
1,482,313	-		Sama_1208	0.17	+0.3
1,482,313	-		Sama_1208	0.17	-1.1
1,482,363	+		Sama_1208	0.20	-0.9
1,482,364	-		Sama_1208	0.20	-0.1
1,482,413	+		Sama_1208	0.22	-2.1
1,482,414	-		Sama_1208	0.22	-0.6
1,482,513	+		Sama_1208	0.27	+1.3
1,482,513	+		Sama_1208	0.27	-2.1
1,482,546	+		Sama_1208	0.29	-0.6
1,482,612	+		Sama_1208	0.33	-1.5
1,482,655	+		Sama_1208	0.35	-0.5
1,482,655	+		Sama_1208	0.35	+0.9
1,482,655	+		Sama_1208	0.35	-0.2
1,482,655	+		Sama_1208	0.35	-2.1
1,482,656	-		Sama_1208	0.35	+1.2
1,482,656	-		Sama_1208	0.35	+0.7
1,482,656	-		Sama_1208	0.35	-0.1
1,482,662	+		Sama_1208	0.35	-0.4
1,482,662	+		Sama_1208	0.35	-0.7
1,482,662	+		Sama_1208	0.35	-0.1
1,482,662	+		Sama_1208	0.35	+1.2
1,482,662	+		Sama_1208	0.35	-0.2
1,482,662	+		Sama_1208	0.35	+1.3
1,482,663	-		Sama_1208	0.35	-1.6
1,482,663	-		Sama_1208	0.35	-1.6
1,482,663	-		Sama_1208	0.35	-0.4
1,482,663	-		Sama_1208	0.35	-0.2
1,482,663	-		Sama_1208	0.35	+0.6
1,482,664	+		Sama_1208	0.35	-2.1
1,482,665	-		Sama_1208	0.35	-2.1
1,482,784	-		Sama_1208	0.41	+0.6
1,482,810	+		Sama_1208	0.43	-0.1
1,482,844	+		Sama_1208	0.44	+0.4
1,482,845	-		Sama_1208	0.44	-0.2
1,482,845	-		Sama_1208	0.44	-2.5
1,482,845	-		Sama_1208	0.44	-0.4
1,482,891	+		Sama_1208	0.47	-0.3
1,482,892	-		Sama_1208	0.47	-0.2
1,482,892	-		Sama_1208	0.47	-1.2