Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2868 and Dshi_2869 are separated by 9 nucleotides Dshi_2869 and Dshi_2870 are separated by 74 nucleotides Dshi_2870 and Dshi_2871 are separated by 36 nucleotides
Dshi_2868: Dshi_2868 - cytochrome c class II (RefSeq), at 3,024,581 to 3,025,060
_2868
Dshi_2869: Dshi_2869 - Gluconate 2-dehydrogenase (acceptor) (RefSeq), at 3,025,070 to 3,025,948
_2869
Dshi_2870: Dshi_2870 - hypothetical protein (RefSeq), at 3,026,023 to 3,026,229
_2870
Dshi_2871: Dshi_2871 - MaoC domain protein dehydratase (RefSeq), at 3,026,266 to 3,027,297
_2871
Position (kb)
3026
3027 Strain fitness (log2 ratio)
-2
-1
0
1 at 3025.099 kb on + strand at 3025.149 kb on - strand at 3025.215 kb on - strand, within Dshi_2869 at 3025.270 kb on + strand, within Dshi_2869 at 3025.283 kb on + strand, within Dshi_2869 at 3025.353 kb on - strand, within Dshi_2869 at 3025.370 kb on - strand, within Dshi_2869 at 3025.393 kb on + strand, within Dshi_2869 at 3025.443 kb on - strand, within Dshi_2869 at 3025.543 kb on - strand, within Dshi_2869 at 3025.564 kb on - strand, within Dshi_2869 at 3025.574 kb on - strand, within Dshi_2869 at 3025.574 kb on - strand, within Dshi_2869 at 3025.619 kb on - strand, within Dshi_2869 at 3025.649 kb on + strand, within Dshi_2869 at 3025.669 kb on + strand, within Dshi_2869 at 3025.767 kb on + strand, within Dshi_2869 at 3025.814 kb on - strand, within Dshi_2869 at 3025.908 kb on - strand at 3025.920 kb on + strand at 3025.952 kb on - strand at 3026.025 kb on + strand at 3026.144 kb on - strand, within Dshi_2870 at 3026.165 kb on + strand, within Dshi_2870 at 3026.427 kb on + strand, within Dshi_2871 at 3026.435 kb on - strand, within Dshi_2871 at 3026.558 kb on - strand, within Dshi_2871 at 3026.565 kb on + strand, within Dshi_2871 at 3026.592 kb on + strand, within Dshi_2871 at 3026.700 kb on + strand, within Dshi_2871 at 3026.741 kb on + strand, within Dshi_2871 at 3026.867 kb on - strand, within Dshi_2871 at 3026.886 kb on - strand, within Dshi_2871 at 3027.032 kb on - strand, within Dshi_2871 at 3027.041 kb on - strand, within Dshi_2871 at 3027.131 kb on + strand, within Dshi_2871 at 3027.131 kb on + strand, within Dshi_2871 at 3027.188 kb on + strand, within Dshi_2871 at 3027.211 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,025,099 + +0.2 3,025,149 - -0.5 3,025,215 - Dshi_2869 0.16 +0.5 3,025,270 + Dshi_2869 0.23 -0.4 3,025,283 + Dshi_2869 0.24 +0.3 3,025,353 - Dshi_2869 0.32 +0.2 3,025,370 - Dshi_2869 0.34 -0.6 3,025,393 + Dshi_2869 0.37 +0.0 3,025,443 - Dshi_2869 0.42 -0.5 3,025,543 - Dshi_2869 0.54 -0.5 3,025,564 - Dshi_2869 0.56 -1.0 3,025,574 - Dshi_2869 0.57 +0.0 3,025,574 - Dshi_2869 0.57 -0.8 3,025,619 - Dshi_2869 0.62 -0.0 3,025,649 + Dshi_2869 0.66 -0.1 3,025,669 + Dshi_2869 0.68 -0.4 3,025,767 + Dshi_2869 0.79 -0.9 3,025,814 - Dshi_2869 0.85 -0.1 3,025,908 - -0.5 3,025,920 + -0.2 3,025,952 - -0.0 3,026,025 + -0.4 3,026,144 - Dshi_2870 0.58 -1.1 3,026,165 + Dshi_2870 0.69 -1.6 3,026,427 + Dshi_2871 0.16 +0.1 3,026,435 - Dshi_2871 0.16 -0.6 3,026,558 - Dshi_2871 0.28 -0.4 3,026,565 + Dshi_2871 0.29 +0.0 3,026,592 + Dshi_2871 0.32 -1.0 3,026,700 + Dshi_2871 0.42 -1.2 3,026,741 + Dshi_2871 0.46 -0.3 3,026,867 - Dshi_2871 0.58 -1.8 3,026,886 - Dshi_2871 0.60 +0.1 3,027,032 - Dshi_2871 0.74 -0.1 3,027,041 - Dshi_2871 0.75 -0.5 3,027,131 + Dshi_2871 0.84 -0.2 3,027,131 + Dshi_2871 0.84 +0.6 3,027,188 + Dshi_2871 0.89 -0.8 3,027,211 + +0.5
Or see this region's nucleotide sequence