Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32810

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
3,440,615	+		PGA1_c32800	0.63	+0.2
3,440,663	+		PGA1_c32800	0.65	-2.1
3,440,706	+		PGA1_c32800	0.67	-2.5
3,440,714	-		PGA1_c32800	0.67	-0.5
3,440,773	+		PGA1_c32800	0.70	+0.0
3,440,773	+		PGA1_c32800	0.70	+0.5
3,440,796	+		PGA1_c32800	0.71	+1.2
3,440,796	+		PGA1_c32800	0.71	+1.0
3,440,796	+		PGA1_c32800	0.71	-0.7
3,440,796	+		PGA1_c32800	0.71	+0.8
3,440,796	+		PGA1_c32800	0.71	+0.2
3,440,804	-		PGA1_c32800	0.71	+1.5
3,440,804	-		PGA1_c32800	0.71	-0.6
3,440,804	-		PGA1_c32800	0.71	-0.8
3,440,804	-		PGA1_c32800	0.71	+1.1
3,440,966	+		PGA1_c32800	0.78	+0.9
3,440,966	+		PGA1_c32800	0.78	-1.3
3,440,967	+		PGA1_c32800	0.78	+1.2
3,440,998	-		PGA1_c32800	0.79	+0.6
3,440,998	-		PGA1_c32800	0.79	-0.3
3,441,108	-		PGA1_c32800	0.84	-1.1
3,441,114	+		PGA1_c32800	0.84	-1.4
3,441,119	+		PGA1_c32800	0.84	-0.1
3,441,128	+		PGA1_c32800	0.85	-0.3
3,441,131	-		PGA1_c32800	0.85	-1.1
3,441,166	+		PGA1_c32800	0.86	+0.3
3,441,189	+		PGA1_c32800	0.87	-0.6
3,441,189	-		PGA1_c32800	0.87	-0.2
3,441,197	-		PGA1_c32800	0.87	-0.9
3,441,255	-		PGA1_c32800	0.90	-0.4
3,441,324	+				-0.9
3,441,340	+				-1.1
3,441,340	+				-0.7
3,441,340	+				-0.8
3,441,348	-				-0.2
3,441,368	+				-0.3
3,441,419	+				+1.1
3,441,424	+				-1.5
3,441,427	-				-0.4
3,441,429	+				+1.9
3,441,457	+				+0.6
3,441,504	+				+0.0
3,441,513	+				-0.4
3,441,521	-				+0.0
3,441,521	-				-0.7
3,441,521	-				-2.4
3,441,589	+				-1.3
3,441,589	+				-0.1
3,441,589	+				+2.0
3,441,589	+				+0.8
3,441,594	+				-1.1
3,441,597	-				-0.5
3,441,609	+				-0.6
3,441,617	+				-0.2
3,441,617	+				-0.5
3,441,617	+				-1.3
3,441,625	-				+0.4
3,441,625	-				-3.0
3,441,646	-				-0.5
3,441,704	+				+0.0
3,441,711	+				+1.0
3,441,712	-				-0.7
3,441,712	-				+0.4
3,441,712	-				-0.1
3,441,725	-				-0.7
3,441,790	-		PGA1_c32810	0.15	+1.6
3,441,803	-		PGA1_c32810	0.16	-0.1
3,441,829	+		PGA1_c32810	0.17	-1.4
3,441,829	+		PGA1_c32810	0.17	-2.3
3,441,830	+		PGA1_c32810	0.18	-2.1
3,441,837	-		PGA1_c32810	0.18	-2.4
3,441,838	-		PGA1_c32810	0.18	-2.0
3,441,925	-		PGA1_c32810	0.25	+0.0
3,441,947	+		PGA1_c32810	0.26	-1.1
3,441,949	+		PGA1_c32810	0.27	-2.1
3,441,950	-		PGA1_c32810	0.27	+0.2
3,441,972	+		PGA1_c32810	0.28	+0.3
3,441,980	-		PGA1_c32810	0.29	-2.1
3,441,980	-		PGA1_c32810	0.29	-2.3
3,441,990	-		PGA1_c32810	0.30	-2.3
3,441,992	+		PGA1_c32810	0.30	-0.9
3,441,997	+		PGA1_c32810	0.30	-2.0
3,442,000	-		PGA1_c32810	0.30	-1.7
3,442,010	-		PGA1_c32810	0.31	-0.2
3,442,020	+		PGA1_c32810	0.32	-2.3
3,442,020	+		PGA1_c32810	0.32	-1.1
3,442,029	+		PGA1_c32810	0.33	-0.7
3,442,118	+		PGA1_c32810	0.39	-1.3
3,442,191	-		PGA1_c32810	0.45	-1.3
3,442,273	+		PGA1_c32810	0.51	-0.1
3,442,345	+		PGA1_c32810	0.57	-1.4
3,442,416	-		PGA1_c32810	0.62	-0.8
3,442,472	+		PGA1_c32810	0.66	-0.1
3,442,571	+		PGA1_c32810	0.74	-0.3
3,442,644	-		PGA1_c32810	0.79	-1.1
3,442,644	-		PGA1_c32810	0.79	-1.1
3,442,660	-		PGA1_c32810	0.80	-1.1
3,442,660	-		PGA1_c32810	0.80	-2.4
3,442,772	-		PGA1_c32810	0.89	-0.7
3,442,774	+		PGA1_c32810	0.89	+0.4
3,442,811	-				+0.7
3,442,816	+				-0.8
3,442,883	-				-0.7
3,442,920	-				-1.1
3,443,000	+				-0.8
3,443,051	-				-2.0
3,443,220	-		PGA1_c32820	0.21	+1.0
3,443,220	-		PGA1_c32820	0.21	-2.1
3,443,222	+		PGA1_c32820	0.22	+0.4
3,443,222	+		PGA1_c32820	0.22	-1.2
3,443,222	+		PGA1_c32820	0.22	-0.3
3,443,222	+		PGA1_c32820	0.22	-2.5
3,443,230	-		PGA1_c32820	0.22	+0.4
3,443,230	-		PGA1_c32820	0.22	-2.1
3,443,230	-		PGA1_c32820	0.22	-2.8
3,443,230	-		PGA1_c32820	0.22	+1.2
3,443,295	+		PGA1_c32820	0.27	-0.2
3,443,298	-		PGA1_c32820	0.27	-1.3
3,443,300	+		PGA1_c32820	0.27	+0.5
3,443,300	+		PGA1_c32820	0.27	-0.6
3,443,300	+		PGA1_c32820	0.27	-0.5
3,443,300	+		PGA1_c32820	0.27	-3.1
3,443,308	-		PGA1_c32820	0.28	+0.2
3,443,308	-		PGA1_c32820	0.28	-2.1
3,443,312	-		PGA1_c32820	0.28	+0.1
3,443,313	-		PGA1_c32820	0.28	+1.5
3,443,348	+		PGA1_c32820	0.30	-1.2
3,443,348	+		PGA1_c32820	0.30	-2.8
3,443,348	+		PGA1_c32820	0.30	+0.2
3,443,348	+		PGA1_c32820	0.30	-0.4
3,443,348	+		PGA1_c32820	0.30	+0.2
3,443,348	+		PGA1_c32820	0.30	-0.8
3,443,348	+		PGA1_c32820	0.30	-1.4
3,443,348	+		PGA1_c32820	0.30	-2.0
3,443,356	-		PGA1_c32820	0.31	-1.8
3,443,356	-		PGA1_c32820	0.31	-2.3
3,443,356	-		PGA1_c32820	0.31	-1.0
3,443,356	-		PGA1_c32820	0.31	+1.1
3,443,356	-		PGA1_c32820	0.31	+0.1
3,443,404	-		PGA1_c32820	0.34	-1.9
3,443,458	-		PGA1_c32820	0.38	-3.7
3,443,561	+		PGA1_c32820	0.45	-0.4
3,443,584	-		PGA1_c32820	0.47	-1.2
3,443,715	+		PGA1_c32820	0.56	-0.2
3,443,749	+		PGA1_c32820	0.59	-0.8
3,443,749	+		PGA1_c32820	0.59	-2.3
3,443,749	+		PGA1_c32820	0.59	-0.5
3,443,757	-		PGA1_c32820	0.59	-0.2
3,443,757	-		PGA1_c32820	0.59	-0.9
3,443,798	+		PGA1_c32820	0.62	-2.1
3,443,798	+		PGA1_c32820	0.62	-1.9
3,443,806	-		PGA1_c32820	0.63	-0.3
3,443,806	-		PGA1_c32820	0.63	+1.5
3,443,806	-		PGA1_c32820	0.63	-2.4
3,443,806	-		PGA1_c32820	0.63	-0.7
3,443,838	-		PGA1_c32820	0.65	-1.6