Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29660

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
3,100,872	-		PGA1_c29650	0.44	+0.4
3,100,911	+		PGA1_c29650	0.47	-0.1
3,100,919	-		PGA1_c29650	0.47	+0.1
3,101,050	+		PGA1_c29650	0.56	+0.3
3,101,050	+		PGA1_c29650	0.56	+0.1
3,101,114	-		PGA1_c29650	0.61	+1.0
3,101,132	+		PGA1_c29650	0.62	-0.1
3,101,198	-		PGA1_c29650	0.66	-0.4
3,101,203	-		PGA1_c29650	0.67	+0.3
3,101,205	-		PGA1_c29650	0.67	-0.2
3,101,215	-		PGA1_c29650	0.67	-0.9
3,101,226	+		PGA1_c29650	0.68	+0.5
3,101,297	+		PGA1_c29650	0.73	-0.4
3,101,297	+		PGA1_c29650	0.73	-1.0
3,101,303	+		PGA1_c29650	0.73	+1.2
3,101,310	-		PGA1_c29650	0.74	-0.7
3,101,342	-		PGA1_c29650	0.76	-0.9
3,101,369	+		PGA1_c29650	0.78	+1.0
3,101,382	-		PGA1_c29650	0.79	-0.9
3,101,387	-		PGA1_c29650	0.79	-2.0
3,101,405	+		PGA1_c29650	0.80	-1.1
3,101,410	+		PGA1_c29650	0.81	-0.3
3,101,413	-		PGA1_c29650	0.81	+0.3
3,101,482	+		PGA1_c29650	0.86	+0.4
3,101,485	-		PGA1_c29650	0.86	+0.1
3,101,485	-		PGA1_c29650	0.86	+1.1
3,101,509	+		PGA1_c29650	0.87	+0.5
3,101,509	+		PGA1_c29650	0.87	-0.5
3,101,517	-		PGA1_c29650	0.88	+0.9
3,101,517	-		PGA1_c29650	0.88	+0.5
3,101,517	-		PGA1_c29650	0.88	+0.5
3,101,517	-		PGA1_c29650	0.88	+1.6
3,101,517	-		PGA1_c29650	0.88	+0.4
3,101,517	-		PGA1_c29650	0.88	+2.1
3,101,539	+		PGA1_c29650	0.89	+1.9
3,101,539	+		PGA1_c29650	0.89	+2.2
3,101,606	+				-0.7
3,101,606	+				-0.1
3,101,614	-				+1.6
3,101,628	-				-0.2
3,101,628	-				+0.7
3,101,687	-				+0.2
3,101,697	-				+1.5
3,101,714	-				+1.2
3,101,783	+				+1.2
3,101,784	-				+0.7
3,101,790	+				+0.1
3,101,822	+				+1.7
3,101,822	-				+0.4
3,101,824	+				-0.4
3,101,846	+				+0.9
3,101,853	+				+0.3
3,101,854	-				-1.8
3,101,861	-				+1.6
3,101,895	-				+1.3
3,101,927	+				+0.1
3,101,927	-				+0.7
3,101,935	-				+2.5
3,101,935	-				+0.6
3,101,935	-				-0.8
3,101,945	+				+0.7
3,101,945	+				-0.9
3,102,008	-				+0.1
3,102,008	-				+0.0
3,102,010	+				+0.0
3,102,010	+				+0.4
3,102,010	+				-0.5
3,102,018	-				+0.3
3,102,018	-				-0.2
3,102,018	-				+0.2
3,102,122	-		PGA1_c29660	0.13	-1.6
3,102,145	-		PGA1_c29660	0.14	+1.7
3,102,163	+		PGA1_c29660	0.15	-0.3
3,102,165	+		PGA1_c29660	0.15	-0.6
3,102,195	+		PGA1_c29660	0.17	-0.1
3,102,228	+		PGA1_c29660	0.18	+0.2
3,102,236	-		PGA1_c29660	0.19	+2.1
3,102,236	-		PGA1_c29660	0.19	+1.3
3,102,265	+		PGA1_c29660	0.20	-1.6
3,102,265	+		PGA1_c29660	0.20	+0.5
3,102,273	-		PGA1_c29660	0.20	+1.1
3,102,273	-		PGA1_c29660	0.20	-1.2
3,102,279	-		PGA1_c29660	0.21	-1.8
3,102,317	+		PGA1_c29660	0.22	+0.2
3,102,320	-		PGA1_c29660	0.22	+1.1
3,102,325	-		PGA1_c29660	0.23	+0.1
3,102,325	-		PGA1_c29660	0.23	+0.1
3,102,337	-		PGA1_c29660	0.23	-1.6
3,102,467	+		PGA1_c29660	0.29	-0.2
3,102,467	+		PGA1_c29660	0.29	+0.2
3,102,469	-		PGA1_c29660	0.29	-3.4
3,102,480	+		PGA1_c29660	0.30	+1.5
3,102,480	+		PGA1_c29660	0.30	+1.3
3,102,488	-		PGA1_c29660	0.30	-2.9
3,102,532	+		PGA1_c29660	0.32	-0.3
3,102,540	-		PGA1_c29660	0.33	+0.2
3,102,548	+		PGA1_c29660	0.33	-0.4
3,102,595	-		PGA1_c29660	0.35	+0.3
3,102,610	-		PGA1_c29660	0.36	+1.5
3,102,641	-		PGA1_c29660	0.37	+0.6
3,102,685	+		PGA1_c29660	0.39	-0.5
3,102,772	-		PGA1_c29660	0.43	+1.6
3,102,783	+		PGA1_c29660	0.44	+1.0
3,102,791	-		PGA1_c29660	0.44	+0.6
3,102,791	-		PGA1_c29660	0.44	+0.6
3,102,791	-		PGA1_c29660	0.44	+0.4
3,102,791	-		PGA1_c29660	0.44	+0.8
3,102,791	-		PGA1_c29660	0.44	+1.3
3,102,843	-		PGA1_c29660	0.46	-0.9
3,102,857	+		PGA1_c29660	0.47	+0.0
3,102,887	+		PGA1_c29660	0.48	-0.7
3,102,887	+		PGA1_c29660	0.48	+0.3
3,102,887	+		PGA1_c29660	0.48	-0.3
3,102,895	-		PGA1_c29660	0.49	-1.3
3,102,895	-		PGA1_c29660	0.49	-1.0
3,102,895	-		PGA1_c29660	0.49	+1.5
3,102,903	-		PGA1_c29660	0.49	-1.1
3,102,923	-		PGA1_c29660	0.50	-0.2
3,103,033	-		PGA1_c29660	0.55	+0.0
3,103,070	-		PGA1_c29660	0.57	-0.1
3,103,112	-		PGA1_c29660	0.59	+0.2
3,103,117	-		PGA1_c29660	0.59	+1.2
3,103,122	-		PGA1_c29660	0.59	+1.1
3,103,132	-		PGA1_c29660	0.60	-0.4
3,103,132	-		PGA1_c29660	0.60	-0.1
3,103,134	+		PGA1_c29660	0.60	+1.7
3,103,139	-		PGA1_c29660	0.60	-0.3
3,103,171	+		PGA1_c29660	0.61	-0.4
3,103,171	+		PGA1_c29660	0.61	+0.7
3,103,179	-		PGA1_c29660	0.62	-1.9
3,103,179	-		PGA1_c29660	0.62	+0.3
3,103,211	+		PGA1_c29660	0.63	-0.3
3,103,222	+		PGA1_c29660	0.64	-0.2
3,103,238	-		PGA1_c29660	0.64	+1.0
3,103,269	+		PGA1_c29660	0.66	-0.5
3,103,291	+		PGA1_c29660	0.67	+0.5
3,103,352	-		PGA1_c29660	0.70	-0.7
3,103,355	-		PGA1_c29660	0.70	+1.6
3,103,369	+		PGA1_c29660	0.70	-0.3
3,103,380	+		PGA1_c29660	0.71	+0.1
3,103,388	-		PGA1_c29660	0.71	-0.7
3,103,388	-		PGA1_c29660	0.71	+0.2
3,103,403	+		PGA1_c29660	0.72	-0.4
3,103,444	+		PGA1_c29660	0.74	-1.4
3,103,596	-		PGA1_c29660	0.81	+1.3
3,103,650	-		PGA1_c29660	0.83	+0.4
3,103,667	-		PGA1_c29660	0.84	+0.5
3,103,746	-		PGA1_c29660	0.88	+0.0
3,103,759	+		PGA1_c29660	0.88	+0.1
3,103,783	+		PGA1_c29660	0.89	-0.1
3,103,796	-		PGA1_c29660	0.90	-0.1
3,103,796	-		PGA1_c29660	0.90	+0.0
3,103,889	+				+0.9
3,103,924	+				-2.9
3,103,943	+				-2.4
3,103,988	+				+0.2
3,104,021	+				+0.5
3,104,021	+				+0.4
3,104,130	+				-0.1
3,104,247	-		PGA1_c29670	0.28	+0.3
3,104,320	-		PGA1_c29670	0.44	+1.9
3,104,331	-		PGA1_c29670	0.46	+0.1
3,104,520	+		PGA1_c29670	0.87	+0.8
3,104,549	+				-1.4
3,104,557	-				+0.2
3,104,639	-				-0.2
3,104,641	+				+0.2
3,104,641	+				+1.2
3,104,692	-				-0.6
3,104,839	-		PGA1_c29680	0.16	+0.3
3,104,870	+		PGA1_c29680	0.19	+0.0
3,104,878	-		PGA1_c29680	0.20	+0.6
3,104,880	+		PGA1_c29680	0.21	+1.7
3,104,880	+		PGA1_c29680	0.21	+0.2
3,104,880	+		PGA1_c29680	0.21	+0.4
3,104,883	-		PGA1_c29680	0.21	+1.6
3,104,888	-		PGA1_c29680	0.22	+0.5
3,104,888	-		PGA1_c29680	0.22	-0.7
3,104,888	-		PGA1_c29680	0.22	+0.4
3,104,901	-		PGA1_c29680	0.23	-0.6
3,104,993	-		PGA1_c29680	0.34	-0.7