Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c28510

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
2,986,142	+				-0.1
2,986,142	+				+0.2
2,986,207	-				+0.3
2,986,215	-				+0.8
2,986,219	+				+0.4
2,986,222	-				-1.5
2,986,227	-				+0.6
2,986,326	-				-0.4
2,986,364	+				-1.7
2,986,364	-				-0.4
2,986,364	-				-1.4
2,986,371	+				-0.8
2,986,383	+				+0.6
2,986,383	+				+0.2
2,986,396	-				-1.0
2,986,418	+				-1.5
2,986,418	+				-0.8
2,986,426	-				+0.9
2,986,426	-				-0.8
2,986,426	-				-0.8
2,986,431	-				-2.9
2,986,512	-				-0.6
2,986,512	-				-0.2
2,986,537	-				+2.5
2,986,567	+				-2.3
2,986,567	+				+0.2
2,986,576	+				-1.3
2,986,578	+				+0.2
2,986,649	+				-1.6
2,986,651	+				-0.4
2,986,656	+				-1.2
2,986,656	+				+1.2
2,986,661	+				+0.2
2,986,661	+				+0.0
2,986,661	+				-0.4
2,986,669	-				-0.8
2,986,669	-				+0.2
2,986,669	-				-1.6
2,986,688	+				+0.6
2,986,702	+				+0.9
2,986,707	+				-0.4
2,986,726	+				+0.8
2,986,731	+				-0.8
2,986,734	+				-0.1
2,986,770	-				-0.6
2,986,807	+				+0.8
2,986,807	+				+0.7
2,986,812	+				-0.4
2,986,837	+		PGA1_c28500	0.13	+0.4
2,986,856	+		PGA1_c28500	0.19	+1.2
2,986,864	-		PGA1_c28500	0.22	+1.2
2,986,864	-		PGA1_c28500	0.22	+0.4
2,986,897	+		PGA1_c28500	0.32	+0.2
2,986,905	-				-1.4
2,986,905	-		PGA1_c28500	0.35	+1.2
2,986,921	-		PGA1_c28500	0.40	-0.4
2,986,939	+		PGA1_c28500	0.46	-1.3
2,986,948	-		PGA1_c28500	0.49	+0.9
2,986,974	+		PGA1_c28500	0.57	-0.8
2,986,983	+		PGA1_c28500	0.60	+0.2
2,986,983	-		PGA1_c28500	0.60	+0.2
2,987,028	-		PGA1_c28500	0.74	+0.2
2,987,030	+		PGA1_c28500	0.75	-0.4
2,987,071	+		PGA1_c28500	0.88	+0.6
2,987,071	+		PGA1_c28500	0.88	+0.1
2,987,074	-		PGA1_c28500	0.89	-0.4
2,987,074	-		PGA1_c28500	0.89	-0.6
2,987,079	-				+0.9
2,987,079	-				-0.1
2,987,084	+				-1.1
2,987,084	+				+0.8
2,987,084	+				+1.2
2,987,084	+				+0.8
2,987,089	-				+0.4
2,987,092	-				+0.3
2,987,092	-				-1.0
2,987,092	-				-0.6
2,987,092	-				+0.8
2,987,092	-				-2.3
2,987,092	-				-2.3
2,987,092	-				+0.2
2,987,092	-				-1.1
2,987,092	-				+1.8
2,987,092	-				-1.9
2,987,094	-				-1.0
2,987,094	-				-1.1
2,987,101	+				-1.5
2,987,177	+				+0.2
2,987,185	-				-1.8
2,987,188	+		PGA1_c28510	0.10	+1.0
2,987,196	-		PGA1_c28510	0.11	+0.2
2,987,207	+		PGA1_c28510	0.12	-1.4
2,987,208	+		PGA1_c28510	0.13	-1.5
2,987,240	+		PGA1_c28510	0.16	+1.5
2,987,245	+		PGA1_c28510	0.17	+0.3
2,987,251	+		PGA1_c28510	0.18	-0.6
2,987,253	-		PGA1_c28510	0.18	+0.2
2,987,253	-		PGA1_c28510	0.18	-0.4
2,987,253	-		PGA1_c28510	0.18	+2.4
2,987,401	+		PGA1_c28510	0.36	+0.9
2,987,408	-		PGA1_c28510	0.37	-2.9
2,987,423	-		PGA1_c28510	0.38	+1.7
2,987,438	+		PGA1_c28510	0.40	-0.4
2,987,443	+		PGA1_c28510	0.41	-0.5
2,987,448	+		PGA1_c28510	0.41	+2.2
2,987,451	-		PGA1_c28510	0.42	-0.8
2,987,451	-		PGA1_c28510	0.42	-0.9
2,987,456	-		PGA1_c28510	0.42	-0.4
2,987,474	+		PGA1_c28510	0.45	-1.1
2,987,532	+		PGA1_c28510	0.52	-1.3
2,987,533	+		PGA1_c28510	0.52	-1.6
2,987,533	+		PGA1_c28510	0.52	+1.2
2,987,533	+		PGA1_c28510	0.52	+0.0
2,987,533	+		PGA1_c28510	0.52	-0.1
2,987,541	-		PGA1_c28510	0.53	+1.2
2,987,541	-		PGA1_c28510	0.53	-1.1
2,987,541	-		PGA1_c28510	0.53	+0.9
2,987,541	-		PGA1_c28510	0.53	+0.3
2,987,541	-		PGA1_c28510	0.53	-0.9
2,987,546	-		PGA1_c28510	0.53	-0.4
2,987,559	+		PGA1_c28510	0.55	+1.8
2,987,567	-		PGA1_c28510	0.56	-0.0
2,987,577	+		PGA1_c28510	0.57	-0.1
2,987,618	-		PGA1_c28510	0.62	+0.4
2,987,635	+		PGA1_c28510	0.64	-1.0
2,987,635	+		PGA1_c28510	0.64	+1.5
2,987,635	+		PGA1_c28510	0.64	+0.2
2,987,635	+		PGA1_c28510	0.64	+0.6
2,987,635	+		PGA1_c28510	0.64	-0.8
2,987,635	+		PGA1_c28510	0.64	-0.6
2,987,643	-		PGA1_c28510	0.65	-0.8
2,987,643	-		PGA1_c28510	0.65	-2.5
2,987,643	-		PGA1_c28510	0.65	+0.8
2,987,643	-		PGA1_c28510	0.65	-2.0
2,987,643	-		PGA1_c28510	0.65	-0.6
2,987,643	-		PGA1_c28510	0.65	+1.9
2,987,643	-		PGA1_c28510	0.65	-1.4
2,987,643	-		PGA1_c28510	0.65	+0.2
2,987,643	-		PGA1_c28510	0.65	+0.2
2,987,643	-		PGA1_c28510	0.65	+0.2
2,987,649	+		PGA1_c28510	0.66	+0.2
2,987,656	+		PGA1_c28510	0.66	-1.8
2,987,679	+		PGA1_c28510	0.69	+0.2
2,987,702	+		PGA1_c28510	0.72	-1.4
2,987,717	-		PGA1_c28510	0.74	-0.8
2,987,717	-		PGA1_c28510	0.74	+0.2
2,987,730	-		PGA1_c28510	0.75	-0.1
2,987,740	+		PGA1_c28510	0.77	-0.1
2,987,741	-		PGA1_c28510	0.77	-1.6
2,987,748	+		PGA1_c28510	0.77	-0.2
2,987,775	+		PGA1_c28510	0.81	-1.0
2,987,780	+		PGA1_c28510	0.81	+0.0
2,987,783	-		PGA1_c28510	0.82	-0.1
2,987,799	+		PGA1_c28510	0.84	-1.1
2,987,799	-		PGA1_c28510	0.84	-0.6
2,987,831	-		PGA1_c28510	0.87	-0.4
2,987,839	+		PGA1_c28510	0.88	-0.1
2,987,857	-				-3.2
2,987,857	-				-0.8
2,987,862	-				+1.4
2,987,905	-				+2.6
2,987,912	+				+0.2
2,987,927	+				-0.8
2,987,927	+				-1.4
2,987,929	+				+0.3
2,987,962	+				+1.2
2,987,962	+				-2.1
2,987,962	+				+2.2
2,987,962	+				-0.9
2,987,962	+				-1.1
2,987,962	+				+1.8
2,987,962	+				-0.1
2,987,962	+				+0.2
2,987,962	+				-0.1
2,987,962	+				+1.8
2,987,962	+				-2.7
2,987,970	-				-0.8
2,987,970	-				-1.5
2,987,970	-				-0.4
2,987,970	-				-1.4
2,987,970	-				-0.6
2,987,970	-				+1.2
2,987,970	-				+0.8
2,987,970	-				-1.4
2,987,970	-				-2.6
2,987,970	-				-0.0
2,987,970	-				+0.7
2,987,970	-				-0.9
2,987,980	-				-1.5
2,987,991	+				+1.8
2,987,991	+				-0.4
2,987,991	-				+0.2
2,988,048	-				+1.2
2,988,057	+				+0.0
2,988,057	+				+0.6
2,988,058	+		PGA1_c28520	0.10	-2.1
2,988,058	+		PGA1_c28520	0.10	-0.0
2,988,058	+		PGA1_c28520	0.10	+1.2
2,988,065	-		PGA1_c28520	0.11	-1.5
2,988,066	-		PGA1_c28520	0.11	-1.4
2,988,069	+		PGA1_c28520	0.12	+0.6
2,988,069	+		PGA1_c28520	0.12	-0.8
2,988,069	+		PGA1_c28520	0.12	+0.8
2,988,071	-		PGA1_c28520	0.12	-0.1
2,988,074	+		PGA1_c28520	0.13	-1.6
2,988,074	+		PGA1_c28520	0.13	+0.5
2,988,076	+		PGA1_c28520	0.13	-0.4
2,988,077	-		PGA1_c28520	0.13	+1.6
2,988,083	-		PGA1_c28520	0.14	-1.4
2,988,083	-		PGA1_c28520	0.14	+0.4
2,988,104	+		PGA1_c28520	0.18	-1.1
2,988,104	-		PGA1_c28520	0.18	-0.4
2,988,127	+		PGA1_c28520	0.22	+0.0
2,988,127	+		PGA1_c28520	0.22	-2.4
2,988,127	+		PGA1_c28520	0.22	+0.9
2,988,127	+		PGA1_c28520	0.22	+2.2
2,988,127	+		PGA1_c28520	0.22	-0.1
2,988,127	+		PGA1_c28520	0.22	+0.6
2,988,131	-		PGA1_c28520	0.22	-0.5
2,988,131	-		PGA1_c28520	0.22	-1.1
2,988,132	+		PGA1_c28520	0.23	-1.0
2,988,133	+		PGA1_c28520	0.23	-0.1
2,988,146	+		PGA1_c28520	0.25	-2.0
2,988,146	+		PGA1_c28520	0.25	+0.3
2,988,154	-		PGA1_c28520	0.26	+1.2
2,988,154	-		PGA1_c28520	0.26	-0.2
2,988,154	-		PGA1_c28520	0.26	+0.2
2,988,167	-		PGA1_c28520	0.28	-0.8
2,988,169	+		PGA1_c28520	0.29	-1.8
2,988,171	-		PGA1_c28520	0.29	+0.4
2,988,192	-		PGA1_c28520	0.33	-0.5
2,988,199	+		PGA1_c28520	0.34	+0.2
2,988,207	+		PGA1_c28520	0.35	+1.6
2,988,208	+		PGA1_c28520	0.35	-0.7
2,988,211	-		PGA1_c28520	0.36	+1.8
2,988,213	+		PGA1_c28520	0.36	-0.8
2,988,222	-		PGA1_c28520	0.38	-0.6
2,988,262	+		PGA1_c28520	0.45	+0.3
2,988,277	+		PGA1_c28520	0.47	-0.1
2,988,279	+		PGA1_c28520	0.47	-1.0
2,988,293	-		PGA1_c28520	0.50	+0.1
2,988,301	+		PGA1_c28520	0.51	+0.6
2,988,309	-		PGA1_c28520	0.52	-1.5
2,988,309	-		PGA1_c28520	0.52	+2.5
2,988,315	+		PGA1_c28520	0.53	-1.4
2,988,321	+		PGA1_c28520	0.54	-2.1
2,988,322	-		PGA1_c28520	0.55	-0.4
2,988,329	-		PGA1_c28520	0.56	-1.8
2,988,329	-		PGA1_c28520	0.56	+0.8
2,988,335	+		PGA1_c28520	0.57	-2.5
2,988,335	+		PGA1_c28520	0.57	+1.2
2,988,337	+		PGA1_c28520	0.57	+0.4
2,988,337	+		PGA1_c28520	0.57	+0.4
2,988,337	+		PGA1_c28520	0.57	-0.4
2,988,345	-		PGA1_c28520	0.59	-1.6
2,988,345	-		PGA1_c28520	0.59	-0.0
2,988,345	-		PGA1_c28520	0.59	-1.7
2,988,345	-		PGA1_c28520	0.59	+0.3
2,988,356	-		PGA1_c28520	0.60	+2.4
2,988,363	+		PGA1_c28520	0.62	-2.0
2,988,363	+		PGA1_c28520	0.62	+0.3
2,988,363	+		PGA1_c28520	0.62	+0.4
2,988,363	+		PGA1_c28520	0.62	+1.8
2,988,363	+		PGA1_c28520	0.62	-1.8
2,988,363	+		PGA1_c28520	0.62	-0.8
2,988,363	+		PGA1_c28520	0.62	-0.4
2,988,363	+		PGA1_c28520	0.62	+0.4
2,988,371	-		PGA1_c28520	0.63	+0.6
2,988,371	-		PGA1_c28520	0.63	+0.3
2,988,371	-		PGA1_c28520	0.63	-0.8
2,988,371	-		PGA1_c28520	0.63	+0.7
2,988,371	-		PGA1_c28520	0.63	+0.4
2,988,371	-		PGA1_c28520	0.63	+0.4
2,988,371	-		PGA1_c28520	0.63	-1.4
2,988,371	-		PGA1_c28520	0.63	-1.6
2,988,371	-		PGA1_c28520	0.63	-0.2
2,988,371	-		PGA1_c28520	0.63	-0.1
2,988,371	-		PGA1_c28520	0.63	+0.4
2,988,371	-		PGA1_c28520	0.63	-0.4
2,988,371	-		PGA1_c28520	0.63	+0.8
2,988,371	-		PGA1_c28520	0.63	+0.2
2,988,371	-		PGA1_c28520	0.63	+1.5
2,988,371	-		PGA1_c28520	0.63	-1.6
2,988,371	-		PGA1_c28520	0.63	-1.4
2,988,385	+		PGA1_c28520	0.65	-2.1
2,988,392	+		PGA1_c28520	0.66	-0.8
2,988,398	+		PGA1_c28520	0.68	+0.4
2,988,400	-		PGA1_c28520	0.68	-1.5
2,988,405	+		PGA1_c28520	0.69	-0.7
2,988,405	+		PGA1_c28520	0.69	+0.9
2,988,424	-		PGA1_c28520	0.72	-0.8
2,988,424	-		PGA1_c28520	0.72	-0.5
2,988,424	-		PGA1_c28520	0.72	+1.4
2,988,432	+		PGA1_c28520	0.73	-0.8
2,988,432	+		PGA1_c28520	0.73	+2.9
2,988,432	+		PGA1_c28520	0.73	+4.2
2,988,432	+		PGA1_c28520	0.73	-0.8
2,988,432	+		PGA1_c28520	0.73	+1.8
2,988,432	+		PGA1_c28520	0.73	-0.8
2,988,432	+		PGA1_c28520	0.73	+1.0
2,988,432	+		PGA1_c28520	0.73	+2.4
2,988,432	+		PGA1_c28520	0.73	-0.8
2,988,432	+		PGA1_c28520	0.73	-0.3
2,988,432	+		PGA1_c28520	0.73	+1.2
2,988,437	+		PGA1_c28520	0.74	-0.4
2,988,437	+		PGA1_c28520	0.74	+0.7
2,988,437	+		PGA1_c28520	0.74	-0.7
2,988,440	-		PGA1_c28520	0.75	-1.4
2,988,440	-		PGA1_c28520	0.75	-1.1
2,988,440	-		PGA1_c28520	0.75	+1.2
2,988,440	-		PGA1_c28520	0.75	-2.3
2,988,440	-		PGA1_c28520	0.75	-0.8
2,988,440	-		PGA1_c28520	0.75	+0.2
2,988,440	-		PGA1_c28520	0.75	+0.5
2,988,440	-		PGA1_c28520	0.75	-0.3
2,988,440	-		PGA1_c28520	0.75	-1.6
2,988,440	-		PGA1_c28520	0.75	+0.8
2,988,440	-		PGA1_c28520	0.75	+0.9
2,988,440	-		PGA1_c28520	0.75	-0.1
2,988,440	-		PGA1_c28520	0.75	-1.6
2,988,450	+		PGA1_c28520	0.76	-0.8
2,988,450	+		PGA1_c28520	0.76	+1.2
2,988,450	+		PGA1_c28520	0.76	+0.4
2,988,451	-		PGA1_c28520	0.76	+0.6
2,988,451	-		PGA1_c28520	0.76	-0.1
2,988,458	-		PGA1_c28520	0.78	-0.7
2,988,458	-		PGA1_c28520	0.78	+0.2
2,988,458	-		PGA1_c28520	0.78	+0.7
2,988,458	-		PGA1_c28520	0.78	+1.2
2,988,465	+		PGA1_c28520	0.79	+0.3
2,988,470	+		PGA1_c28520	0.80	+1.7
2,988,470	-		PGA1_c28520	0.80	-0.9
2,988,472	+		PGA1_c28520	0.80	-1.4
2,988,480	+		PGA1_c28520	0.81	-2.0
2,988,480	+		PGA1_c28520	0.81	+1.2
2,988,480	+		PGA1_c28520	0.81	-1.7
2,988,480	+		PGA1_c28520	0.81	+1.2
2,988,480	+		PGA1_c28520	0.81	+0.4
2,988,480	+		PGA1_c28520	0.81	-0.4
2,988,480	+		PGA1_c28520	0.81	-0.5
2,988,480	+		PGA1_c28520	0.81	-2.4
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