Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c21680

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
2,246,374	+		PGA1_c21670	0.40	-0.8
2,246,404	+		PGA1_c21670	0.42	+0.6
2,246,404	+		PGA1_c21670	0.42	+1.4
2,246,407	-		PGA1_c21670	0.42	-0.4
2,246,417	-		PGA1_c21670	0.42	+0.7
2,246,417	-		PGA1_c21670	0.42	+0.7
2,246,463	-		PGA1_c21670	0.46	+1.1
2,246,502	+		PGA1_c21670	0.48	-1.5
2,246,608	-		PGA1_c21670	0.56	-0.6
2,246,622	+		PGA1_c21670	0.57	+0.9
2,246,640	-		PGA1_c21670	0.58	+0.2
2,246,704	+		PGA1_c21670	0.62	-2.0
2,246,722	-		PGA1_c21670	0.63	+1.8
2,246,749	+		PGA1_c21670	0.65	-0.1
2,246,792	-		PGA1_c21670	0.68	+1.3
2,246,802	+		PGA1_c21670	0.69	+0.3
2,247,036	+		PGA1_c21670	0.85	+1.6
2,247,076	+		PGA1_c21670	0.88	-0.0
2,247,172	-				+0.2
2,247,185	-				-0.9
2,247,230	+				+2.3
2,247,230	+				+0.6
2,247,230	+				-1.0
2,247,230	+				-0.4
2,247,230	+				-0.2
2,247,230	+				-1.2
2,247,230	+				+1.5
2,247,230	+				-2.7
2,247,230	+				+0.6
2,247,230	+				+0.7
2,247,230	+				+0.4
2,247,230	+				+0.2
2,247,230	+				-0.5
2,247,230	+				-0.5
2,247,230	+				-1.5
2,247,230	+				+1.0
2,247,230	+				+0.5
2,247,230	+				+1.1
2,247,230	+				-1.2
2,247,230	+				-0.4
2,247,230	+				+0.2
2,247,230	+				+0.3
2,247,238	-				+2.0
2,247,238	-				-0.2
2,247,238	-				+0.6
2,247,238	-				-2.4
2,247,238	-				-2.0
2,247,238	-				-1.2
2,247,238	-				+0.4
2,247,238	-				-0.8
2,247,238	-				-0.5
2,247,238	-				-0.8
2,247,238	-				+0.9
2,247,240	+				+0.6
2,247,240	+				+1.8
2,247,299	+				-0.4
2,247,307	-				+0.3
2,247,315	-				-0.4
2,247,315	-				-0.2
2,247,315	-				+0.1
2,247,315	-				+0.3
2,247,315	-				+1.6
2,247,317	-				+1.2
2,247,317	-				+0.1
2,247,317	-				+0.3
2,247,361	-				+1.2
2,247,363	+				-0.6
2,247,418	-				+0.8
2,247,428	+				+0.5
2,247,443	+				+0.6
2,247,444	+				+0.1
2,247,497	-		PGA1_c21680	0.11	+0.8
2,247,499	-		PGA1_c21680	0.12	+2.6
2,247,507	+		PGA1_c21680	0.12	-0.2
2,247,523	+		PGA1_c21680	0.13	-0.2
2,247,531	-		PGA1_c21680	0.14	+0.5
2,247,532	-		PGA1_c21680	0.14	-0.2
2,247,543	+		PGA1_c21680	0.15	+1.4
2,247,551	-		PGA1_c21680	0.15	+0.9
2,247,673	-		PGA1_c21680	0.23	+0.2
2,247,758	+		PGA1_c21680	0.29	+1.3
2,247,770	-		PGA1_c21680	0.30	-0.2
2,247,780	-		PGA1_c21680	0.30	+0.9
2,247,826	-		PGA1_c21680	0.33	-1.2
2,247,911	-		PGA1_c21680	0.39	+0.9
2,248,020	-		PGA1_c21680	0.46	-0.1
2,248,021	-		PGA1_c21680	0.46	-1.5
2,248,091	+		PGA1_c21680	0.51	+0.6
2,248,101	+		PGA1_c21680	0.51	-1.8
2,248,108	-		PGA1_c21680	0.52	-0.8
2,248,143	-		PGA1_c21680	0.54	-1.1
2,248,159	+		PGA1_c21680	0.55	-1.3
2,248,159	+		PGA1_c21680	0.55	+0.8
2,248,167	-		PGA1_c21680	0.56	-0.0
2,248,232	+		PGA1_c21680	0.60	+1.0
2,248,234	+		PGA1_c21680	0.60	-0.2
2,248,237	-		PGA1_c21680	0.61	+0.8
2,248,247	-		PGA1_c21680	0.61	-0.4
2,248,253	+		PGA1_c21680	0.62	+1.3
2,248,261	-		PGA1_c21680	0.62	-1.4
2,248,261	-		PGA1_c21680	0.62	+0.4
2,248,267	+		PGA1_c21680	0.62	-0.9
2,248,273	+		PGA1_c21680	0.63	-0.3
2,248,273	+		PGA1_c21680	0.63	+0.5
2,248,281	-		PGA1_c21680	0.63	-0.2
2,248,281	-		PGA1_c21680	0.63	-0.2
2,248,385	-		PGA1_c21680	0.70	+0.0
2,248,406	+		PGA1_c21680	0.72	+0.7
2,248,418	-		PGA1_c21680	0.72	-2.8
2,248,493	+		PGA1_c21680	0.77	-0.2
2,248,493	+		PGA1_c21680	0.77	-0.2
2,248,493	+		PGA1_c21680	0.77	-2.0
2,248,493	+		PGA1_c21680	0.77	-0.8
2,248,501	-		PGA1_c21680	0.78	+0.4
2,248,501	-		PGA1_c21680	0.78	-1.4
2,248,506	+		PGA1_c21680	0.78	-0.6
2,248,511	+		PGA1_c21680	0.79	-2.0
2,248,549	+		PGA1_c21680	0.81	+0.4
2,248,549	+		PGA1_c21680	0.81	+0.5
2,248,551	+		PGA1_c21680	0.81	+0.3
2,248,559	-		PGA1_c21680	0.82	+0.0
2,248,574	-		PGA1_c21680	0.83	-0.7
2,248,597	+		PGA1_c21680	0.84	+0.4
2,248,625	-		PGA1_c21680	0.86	-2.5
2,248,630	-		PGA1_c21680	0.87	+1.3
2,248,648	+		PGA1_c21680	0.88	+1.5
2,248,673	+		PGA1_c21680	0.89	-0.1
2,248,779	-				-0.2
2,248,779	-				+0.8
2,248,786	+				-1.0
2,248,794	-				+0.7
2,248,804	-				-0.3
2,248,849	-				+0.9
2,248,849	-				-0.6
2,248,865	+				+0.6
2,248,908	+				+0.9
2,248,908	+				-0.9
2,249,187	+		PGA1_c21690	0.14	+0.2
2,249,228	-		PGA1_c21690	0.18	+0.8
2,249,236	+		PGA1_c21690	0.18	+1.9
2,249,264	-		PGA1_c21690	0.21	+1.2
2,249,335	-		PGA1_c21690	0.27	+2.0
2,249,336	-		PGA1_c21690	0.27	-0.6
2,249,341	-		PGA1_c21690	0.27	-1.3
2,249,351	+		PGA1_c21690	0.28	+0.8
2,249,363	+		PGA1_c21690	0.29	-0.4
2,249,363	+		PGA1_c21690	0.29	+1.1
2,249,414	+		PGA1_c21690	0.33	-0.8
2,249,422	+		PGA1_c21690	0.34	+1.4
2,249,442	+		PGA1_c21690	0.35	-0.0
2,249,509	+		PGA1_c21690	0.41	+0.0
2,249,528	-		PGA1_c21690	0.43	+0.3
2,249,617	+		PGA1_c21690	0.50	-0.2
2,249,625	-		PGA1_c21690	0.51	+0.6
2,249,625	-		PGA1_c21690	0.51	-0.7
2,249,625	-		PGA1_c21690	0.51	-0.8
2,249,676	-		PGA1_c21690	0.55	-1.0
2,249,677	+		PGA1_c21690	0.55	+2.8
2,249,744	-		PGA1_c21690	0.60	+0.8
2,249,766	-		PGA1_c21690	0.62	+2.3
2,249,830	+		PGA1_c21690	0.67	+1.3