Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c18200

Experiment: L-Proline (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Proline (C)
1,901,193	-		PGA1_c18195	0.25	-1.5
1,901,228	+		PGA1_c18195	0.33	-0.7
1,901,240	+		PGA1_c18195	0.36	+1.1
1,901,250	-		PGA1_c18195	0.38	-2.4
1,901,293	+		PGA1_c18195	0.49	-0.2
1,901,293	+		PGA1_c18195	0.49	+1.1
1,901,301	-		PGA1_c18195	0.51	+1.0
1,901,301	-		PGA1_c18195	0.51	+1.3
1,901,327	-		PGA1_c18195	0.57	+0.1
1,901,384	+		PGA1_c18195	0.71	-0.2
1,901,388	+		PGA1_c18195	0.71	+0.1
1,901,388	+		PGA1_c18195	0.71	+0.9
1,901,388	+		PGA1_c18195	0.71	-1.9
1,901,388	+		PGA1_c18195	0.71	-0.4
1,901,388	+		PGA1_c18195	0.71	+0.8
1,901,392	-		PGA1_c18195	0.72	-1.9
1,901,396	-		PGA1_c18195	0.73	+1.2
1,901,401	+		PGA1_c18195	0.75	-0.2
1,901,406	+		PGA1_c18195	0.76	-2.4
1,901,409	-		PGA1_c18195	0.76	-1.1
1,901,418	+		PGA1_c18195	0.79	-2.0
1,901,418	+		PGA1_c18195	0.79	+0.1
1,901,418	+		PGA1_c18195	0.79	-2.0
1,901,419	-		PGA1_c18195	0.79	-0.7
1,901,426	+		PGA1_c18195	0.81	-1.2
1,901,434	-		PGA1_c18195	0.82	-2.4
1,901,450	+		PGA1_c18195	0.86	+2.0
1,901,497	-				-0.3
1,901,532	+				-0.6
1,901,533	+				-1.2
1,901,541	-				-0.2
1,901,545	+				+0.8
1,901,574	-				-1.2
1,901,574	-				-1.5
1,901,577	+				-1.8
1,901,594	-				+0.2
1,901,609	-				+0.6
1,901,611	-				-1.5
1,901,612	+				+0.1
1,901,654	-				-2.2
1,901,661	+				-0.3
1,901,669	-				-2.4
1,901,676	+				-0.4
1,901,676	+				-0.5
1,901,676	+				+0.7
1,901,684	-				-3.1
1,901,736	-				-0.2
1,901,775	-				-0.5
1,901,791	-				+0.2
1,901,791	-				-0.5
1,901,828	+				+0.0
1,901,849	-				+0.8
1,901,851	+				-1.1
1,901,851	+				+0.6
1,901,851	+				-0.8
1,901,856	+				+0.0
1,901,864	-				-0.1
1,901,864	-				-0.5
1,901,868	+				-1.8
1,901,870	+				-1.0
1,901,888	+				-0.1
1,901,952	+				-0.4
1,901,962	-				-2.0
1,901,965	-				-1.7
1,901,965	-				-0.4
1,901,966	+				-1.5
1,901,966	+				-1.9
1,901,983	-				+0.4
1,901,989	+				+0.0
1,901,989	+				+0.2
1,901,989	+				-2.9
1,901,989	+				-0.7
1,901,989	+				+0.0
1,901,989	+				-0.5
1,901,989	+				-0.5
1,901,989	+				-3.5
1,901,989	+				-0.6
1,901,989	+				-0.8
1,901,989	+				-1.7
1,901,989	+				-0.7
1,901,989	+				-0.7
1,901,989	+				+0.0
1,901,989	+				-0.2
1,901,989	+				-1.2
1,901,989	+				+0.6
1,901,994	+				+0.2
1,901,997	-				-0.9
1,901,997	-				+0.6
1,901,997	-				-0.2
1,901,997	-				+0.6
1,901,997	-				+0.4
1,901,997	-				-0.1
1,902,002	-				+1.3
1,902,002	-				+1.4
1,902,002	-				-1.0
1,902,008	+				-0.8
1,902,010	-				-0.5
1,902,032	+				+0.5
1,902,036	+				-1.0
1,902,037	+				-1.2
1,902,076	-				-1.9
1,902,079	+				+1.4
1,902,079	+				+0.2
1,902,080	+				+1.2
1,902,080	+				-0.4
1,902,080	+				-0.8
1,902,085	+				+0.8
1,902,088	-				+1.0
1,902,088	-				-0.2
1,902,088	-				-1.1
1,902,088	-				-1.2
1,902,090	+				+0.4
1,902,090	+				-0.3
1,902,090	+				-1.5
1,902,090	+				-0.2
1,902,090	+				-2.7
1,902,091	-				-0.2
1,902,098	-				-2.5
1,902,098	-				+0.8
1,902,102	+				+3.1
1,902,102	+				+0.2
1,902,102	+				-1.2
1,902,102	+				-0.2
1,902,108	+				+0.2
1,902,110	-				-2.1
1,902,110	-				-2.0
1,902,110	-				-1.0
1,902,110	-				-1.2
1,902,110	-				-0.8
1,902,115	-				+0.2
1,902,116	-				-1.1
1,902,121	+				-0.5
1,902,121	+				+0.7
1,902,121	+				+0.7
1,902,121	+				+0.4
1,902,173	+				-1.2
1,902,181	+				-0.9
1,902,182	+				-2.2
1,902,182	+				+0.0
1,902,182	+				-2.0
1,902,182	+				+0.6
1,902,182	+				+0.7
1,902,182	+				+1.5
1,902,182	+				+0.0
1,902,182	+				-0.4
1,902,182	+				+0.2
1,902,182	+				+0.8
1,902,182	+				-1.4
1,902,182	+				-0.4
1,902,182	+				-0.9
1,902,182	+				-0.2
1,902,190	-				-0.3
1,902,190	-				+0.4
1,902,190	-				+1.1
1,902,190	-				-1.1
1,902,190	-				-1.5
1,902,190	-				+0.5
1,902,190	-				-0.4
1,902,190	-				+0.1
1,902,190	-				-0.9
1,902,190	-				-0.2
1,902,192	+				+1.1
1,902,192	-				-0.1
1,902,198	-				-0.1
1,902,200	-				-1.0
1,902,215	+				-1.6
1,902,229	+				-1.8
1,902,235	-				+0.4
1,902,237	-				+0.9
1,902,260	+				+0.2
1,902,268	-				+2.8
1,902,297	+				+1.0
1,902,297	+				-0.4
1,902,297	+				+0.4
1,902,304	+				-0.5
1,902,346	-				-0.5
1,902,382	+				-1.3
1,902,382	+				-0.8
1,902,382	+				+1.0
1,902,382	+				+0.4
1,902,382	+				+0.9
1,902,390	-				+0.2
1,902,390	-				+0.6
1,902,390	-				+0.4
1,902,390	-				-0.2
1,902,390	-				-0.3
1,902,390	-				-1.1
1,902,390	-				-0.8
1,902,407	+				-3.0
1,902,407	+				+1.1
1,902,410	-				-2.2
1,902,415	-				-0.8
1,902,415	-				+0.3
1,902,426	+				-2.0
1,902,426	+				-0.1
1,902,426	+				+0.6
1,902,426	+				+0.1
1,902,426	+				+0.3
1,902,426	+				-1.2
1,902,426	+				-0.5
1,902,426	+				-0.5
1,902,426	+				+0.1
1,902,434	-				+1.6
1,902,434	-				+1.3
1,902,434	-				-0.8
1,902,434	-				+0.6
1,902,434	-				+2.2
1,902,434	-				-0.2
1,902,462	-				+0.2
1,902,494	+		PGA1_c18200	0.10	-0.1
1,902,497	-		PGA1_c18200	0.10	+0.1
1,902,505	+		PGA1_c18200	0.11	-0.1
1,902,505	+		PGA1_c18200	0.11	-0.6
1,902,510	+		PGA1_c18200	0.11	-0.8
1,902,510	+		PGA1_c18200	0.11	-0.3
1,902,510	+		PGA1_c18200	0.11	+0.8
1,902,510	+		PGA1_c18200	0.11	-0.7
1,902,510	+		PGA1_c18200	0.11	-0.5
1,902,510	+		PGA1_c18200	0.11	-0.0
1,902,510	+		PGA1_c18200	0.11	+0.8
1,902,510	+		PGA1_c18200	0.11	+0.8
1,902,510	+		PGA1_c18200	0.11	+0.8
1,902,510	+		PGA1_c18200	0.11	-0.7
1,902,510	+		PGA1_c18200	0.11	-0.8
1,902,510	+		PGA1_c18200	0.11	+0.1
1,902,512	+		PGA1_c18200	0.11	+0.4
1,902,512	+		PGA1_c18200	0.11	-0.5
1,902,513	-		PGA1_c18200	0.11	-0.5
1,902,515	+		PGA1_c18200	0.11	+0.2
1,902,515	+		PGA1_c18200	0.11	+0.2
1,902,515	+		PGA1_c18200	0.11	-1.1
1,902,518	-		PGA1_c18200	0.11	-1.8
1,902,518	-		PGA1_c18200	0.11	+0.5
1,902,518	-		PGA1_c18200	0.11	+1.8
1,902,518	-		PGA1_c18200	0.11	-1.7
1,902,518	-		PGA1_c18200	0.11	+0.1
1,902,518	-		PGA1_c18200	0.11	-1.0
1,902,518	-		PGA1_c18200	0.11	-0.4
1,902,518	-		PGA1_c18200	0.11	+1.0
1,902,518	-		PGA1_c18200	0.11	+0.1
1,902,520	-		PGA1_c18200	0.11	+1.0
1,902,523	+		PGA1_c18200	0.11	-2.3
1,902,523	-		PGA1_c18200	0.11	-0.8
1,902,523	-		PGA1_c18200	0.11	-1.6
1,902,527	+		PGA1_c18200	0.11	-0.3
1,902,528	+		PGA1_c18200	0.11	+0.3
1,902,528	+		PGA1_c18200	0.11	+1.1
1,902,528	+		PGA1_c18200	0.11	-0.5
1,902,528	+		PGA1_c18200	0.11	+0.3
1,902,528	-		PGA1_c18200	0.11	+0.1
1,902,533	-		PGA1_c18200	0.12	+0.2
1,902,534	+		PGA1_c18200	0.12	-1.5
1,902,534	+		PGA1_c18200	0.12	+1.4
1,902,543	-		PGA1_c18200	0.12	-0.8
1,902,547	-		PGA1_c18200	0.12	-1.5
1,902,547	-		PGA1_c18200	0.12	-1.2
1,902,562	+		PGA1_c18200	0.13	+0.1
1,902,577	-		PGA1_c18200	0.13	+0.0
1,902,601	-		PGA1_c18200	0.14	+0.1
1,902,602	-		PGA1_c18200	0.14	+1.1
1,902,620	+		PGA1_c18200	0.15	+1.9
1,902,658	+		PGA1_c18200	0.16	-1.1
1,902,658	+		PGA1_c18200	0.16	-0.7
1,902,675	+		PGA1_c18200	0.16	-0.2
1,902,676	-		PGA1_c18200	0.16	+1.1
1,902,682	-		PGA1_c18200	0.17	+0.5
1,902,704	-		PGA1_c18200	0.17	-2.2
1,902,704	-		PGA1_c18200	0.17	+1.5
1,902,718	-		PGA1_c18200	0.18	-2.4
1,902,718	-		PGA1_c18200	0.18	+1.6
1,902,722	-		PGA1_c18200	0.18	+0.8
1,902,772	-		PGA1_c18200	0.20	+0.8
1,902,800	+		PGA1_c18200	0.21	-0.6
1,902,800	+		PGA1_c18200	0.21	-1.8
1,902,809	-		PGA1_c18200	0.21	+2.0
1,902,815	+		PGA1_c18200	0.21	-0.9
1,902,817	-		PGA1_c18200	0.21	-1.8
1,902,837	+		PGA1_c18200	0.22	+0.2
1,902,837	+		PGA1_c18200	0.22	+1.3
1,902,901	-		PGA1_c18200	0.24	-1.2
1,902,996	+		PGA1_c18200	0.27	-0.2
1,903,015	-		PGA1_c18200	0.28	-0.2
1,903,015	-		PGA1_c18200	0.28	-0.6
1,903,015	-		PGA1_c18200	0.28	-0.5
1,903,027	+		PGA1_c18200	0.28	-1.1
1,903,027	+		PGA1_c18200	0.28	+0.7
1,903,027	+		PGA1_c18200	0.28	+0.2
1,903,027	+		PGA1_c18200	0.28	+0.4
1,903,027	+		PGA1_c18200	0.28	-1.1
1,903,035	-		PGA1_c18200	0.29	-1.0
1,903,035	-		PGA1_c18200	0.29	-0.8
1,903,035	-		PGA1_c18200	0.29	-0.8
1,903,035	-		PGA1_c18200	0.29	-1.7
1,903,049	-		PGA1_c18200	0.29	-0.8
1,903,078	+		PGA1_c18200	0.30	-1.2
1,903,086	-		PGA1_c18200	0.30	-0.3
1,903,114	+		PGA1_c18200	0.31	-2.5
1,903,131	-		PGA1_c18200	0.32	-0.8
1,903,155	-		PGA1_c18200	0.33	-0.9
1,903,170	-		PGA1_c18200	0.33	+0.4
1,903,198	+		PGA1_c18200	0.34	-0.3
1,903,217	-		PGA1_c18200	0.35	-0.8
1,903,249	-		PGA1_c18200	0.36	-0.2
1,903,263	+		PGA1_c18200	0.36	-0.3
1,903,322	+		PGA1_c18200	0.38	-1.0
1,903,371	-		PGA1_c18200	0.40	+0.8
1,903,470	+		PGA1_c18200	0.43	-0.8
1,903,483	+		PGA1_c18200	0.44	-0.6
1,903,484	+		PGA1_c18200	0.44	+0.2
1,903,492	-		PGA1_c18200	0.44	-0.6
1,903,526	+		PGA1_c18200	0.45	+0.1
1,903,526	+		PGA1_c18200	0.45	+0.0
1,903,526	+		PGA1_c18200	0.45	+0.0
1,903,526	+		PGA1_c18200	0.45	+0.0
1,903,526	+		PGA1_c18200	0.45	+0.4
1,903,534	-		PGA1_c18200	0.45	-0.7
1,903,534	-		PGA1_c18200	0.45	-0.6
1,903,575	+		PGA1_c18200	0.47	-0.8
1,903,585	+		PGA1_c18200	0.47	-0.1
1,903,700	-		PGA1_c18200	0.51	+0.6
1,903,700	-		PGA1_c18200	0.51	-1.5
1,903,802	-		PGA1_c18200	0.54	+0.6
1,903,804	-		PGA1_c18200	0.54	-1.0
1,903,913	-		PGA1_c18200	0.58	-1.3
1,903,913	-		PGA1_c18200	0.58	-0.9
1,903,943	-		PGA1_c18200	0.59	-0.1
1,903,968	-		PGA1_c18200	0.60	-1.4
1,904,164	+		PGA1_c18200	0.67	-1.3
1,904,216	-		PGA1_c18200	0.68	-2.4
1,904,216	-		PGA1_c18200	0.68	-1.5
1,905,036	+				-1.0
1,905,036	+				+1.0
1,905,036	+				+0.3
1,905,036	+				+0.8
1,905,036	+				-1.4
1,905,039	-				-0.2
1,905,044	-				-0.5
1,905,044	-				-0.5
1,905,044	-				+1.3
1,905,044	-				-0.5
1,905,046	+				-0.6
1,905,046	+				+0.6
1,905,049	-				+0.5
1,905,049	-				-0.6
1,905,049	-				+0.4
1,905,068	+				+1.6
1,905,068	+				+0.4
1,905,068	+				+2.4
1,905,071	-				-2.2
1,905,078	+				-1.5
1,905,086	-				-1.2
1,905,134	+				+0.0
1,905,157	+				-1.7
1,905,157	+				-0.3
1,905,162	+				-2.7
1,905,162	+				-0.2
1,905,162	+				+0.0
1,905,165	-				-0.8
1,905,169	+				-0.2
1,905,169	-				-1.0
1,905,169	-				+1.0
1,905,169	-				+0.8
1,905,170	-				-0.2
1,905,177	+				+0.6
1,905,177	+				+0.2
1,905,177	+				-0.7
1,905,177	+				-0.2
1,905,177	-				-0.8
1,905,177	-				-0.0
1,905,177	-				-0.2
1,905,185	-				+0.1
1,905,185	-				-0.3
1,905,185	-				-0.2
1,905,185	-				+0.2
1,905,190	-				+0.3
1,905,202	-				-0.8
1,905,238	+				-2.5
1,905,279	-				-0.5
1,905,280	+				-0.2
1,905,280	+				+0.5
1,905,280	+				-1.4
1,905,280	+				+1.0
1,905,280	+				+0.4
1,905,285	+				+0.1
1,905,285	+				-0.5
1,905,285	+				+1.0
1,905,288	-				+0.6
1,905,288	-				-0.4
1,905,288	-				-0.4
1,905,288	-				+1.1
1,905,288	-				+0.5
1,905,293	-				-0.1
1,905,295	+				-0.4
1,905,305	+				-1.2
1,905,305	+				-1.4
1,905,305	+				-0.8
1,905,313	-				-0.2
1,905,313	-				-0.8
1,905,318	-				+1.6
1,905,357	-				+0.9
1,905,370	+				-1.4
1,905,381	+				+1.8
1,905,388	-				-0.2
1,905,422	-				+0.4
1,905,425	+				-0.4
1,905,425	+				-0.6
1,905,430	+				-0.8
1,905,430	+				-0.5
1,905,433	-				+0.0
1,905,433	-				-1.2
1,905,433	-				-1.0
1,905,438	+				+0.1
1,905,438	-				-2.2
1,905,438	-				-0.2
1,905,476	-				-0.8
1,905,484	+				-0.1
1,905,573	-				-0.3
1,905,620	-				+0.3
1,905,690	-		PGA1_c18210	0.13	+0.1
1,905,739	+		PGA1_c18210	0.18	+0.1
1,905,763	+		PGA1_c18210	0.20	-0.1
1,905,781	-		PGA1_c18210	0.22	+0.1
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1,905,815	+		PGA1_c18210	0.25	+1.0
1,905,825	+		PGA1_c18210	0.26	+2.0
1,905,858	-		PGA1_c18210	0.29	+0.4
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1,906,057	+		PGA1_c18210	0.49	+1.1
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