Strain Fitness in Shewanella amazonensis SB2B around Sama_2746

Experiment: casaminos (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (N)
3,282,712	+				-0.6
3,282,790	+				+0.1
3,282,932	+				+0.3
3,283,041	-				+0.4
3,283,064	+		Sama_2745	0.13	+0.8
3,283,126	+		Sama_2745	0.23	+0.5
3,283,127	-		Sama_2745	0.23	+0.2
3,283,127	-		Sama_2745	0.23	+1.1
3,283,134	+		Sama_2745	0.24	-0.3
3,283,212	+		Sama_2745	0.37	+0.6
3,283,212	+		Sama_2745	0.37	-0.6
3,283,212	+		Sama_2745	0.37	-0.7
3,283,212	+		Sama_2745	0.37	+0.5
3,283,212	+		Sama_2745	0.37	-0.0
3,283,213	-		Sama_2745	0.37	-0.6
3,283,213	-		Sama_2745	0.37	-0.9
3,283,213	-		Sama_2745	0.37	-0.4
3,283,213	-		Sama_2745	0.37	-1.5
3,283,213	-		Sama_2745	0.37	+0.6
3,283,213	-		Sama_2745	0.37	-0.5
3,283,213	-		Sama_2745	0.37	+0.1
3,283,228	-		Sama_2745	0.39	+0.5
3,283,238	+		Sama_2745	0.41	+0.8
3,283,239	-		Sama_2745	0.41	-2.4
3,283,253	+		Sama_2745	0.43	+0.3
3,283,254	-		Sama_2745	0.43	+0.4
3,283,338	-		Sama_2745	0.56	-0.4
3,283,346	+		Sama_2745	0.58	-0.1
3,283,346	+		Sama_2745	0.58	-0.1
3,283,346	+		Sama_2745	0.58	-0.7
3,283,346	+		Sama_2745	0.58	-1.5
3,283,346	+		Sama_2745	0.58	-0.7
3,283,346	+		Sama_2745	0.58	-0.3
3,283,346	+		Sama_2745	0.58	-0.2
3,283,347	-		Sama_2745	0.58	+0.1
3,283,347	-		Sama_2745	0.58	+0.8
3,283,347	-		Sama_2745	0.58	+0.4
3,283,347	-		Sama_2745	0.58	-0.8
3,283,347	-		Sama_2745	0.58	-0.7
3,283,347	-		Sama_2745	0.58	-0.1
3,283,347	-		Sama_2745	0.58	-0.3
3,283,348	+		Sama_2745	0.58	-0.2
3,283,348	+		Sama_2745	0.58	+0.9
3,283,348	+		Sama_2745	0.58	-0.1
3,283,349	-		Sama_2745	0.58	+1.1
3,283,349	-		Sama_2745	0.58	+0.8
3,283,349	-		Sama_2745	0.58	+0.0
3,283,349	-		Sama_2745	0.58	+0.4
3,283,349	-		Sama_2745	0.58	-1.0
3,283,388	-		Sama_2745	0.64	+0.2
3,283,416	+		Sama_2745	0.69	+0.0
3,283,492	-		Sama_2745	0.80	+0.3
3,283,492	-		Sama_2745	0.80	-0.2
3,283,492	-		Sama_2745	0.80	+1.2
3,283,492	-		Sama_2745	0.80	-1.1
3,283,492	-		Sama_2745	0.80	-2.1
3,283,604	+				-0.6
3,283,650	-				+1.5
3,283,688	-				-0.4
3,283,698	+				-2.4
3,283,788	+				-1.2
3,283,788	+				+0.5
3,283,789	-				-0.6
3,283,789	-				-1.8
3,283,789	-				-1.1
3,283,789	-				-1.6
3,283,789	-				-1.1
3,283,826	+				-1.9
3,283,826	+				-1.6
3,283,832	+				-1.7
3,283,832	+				-1.6
3,283,833	-				-1.8
3,283,833	-				-3.3
3,283,833	-				-0.8
3,283,833	-				-0.2
3,283,846	-				-2.9
3,283,904	-				-2.0
3,284,002	+		Sama_2746	0.13	-1.5
3,284,003	-		Sama_2746	0.13	-2.1
3,284,003	-		Sama_2746	0.13	-1.9
3,284,003	-		Sama_2746	0.13	-1.2
3,284,088	+		Sama_2746	0.17	-0.8
3,284,136	+		Sama_2746	0.19	-0.5
3,284,139	-		Sama_2746	0.19	-2.4
3,284,139	-		Sama_2746	0.19	-1.4
3,284,139	-		Sama_2746	0.19	-2.4
3,284,139	-		Sama_2746	0.19	-0.1
3,284,139	-		Sama_2746	0.19	-1.3
3,284,206	+		Sama_2746	0.22	-2.0
3,284,207	-		Sama_2746	0.22	-2.8
3,284,207	-		Sama_2746	0.22	-1.1
3,284,207	-		Sama_2746	0.22	-1.2
3,284,254	+		Sama_2746	0.25	-0.8
3,284,254	+		Sama_2746	0.25	-0.2
3,284,254	+		Sama_2746	0.25	-0.8
3,284,254	+		Sama_2746	0.25	-0.4
3,284,254	+		Sama_2746	0.25	-0.9
3,284,254	+		Sama_2746	0.25	-1.7
3,284,254	+		Sama_2746	0.25	+0.1
3,284,254	+		Sama_2746	0.25	-0.6
3,284,254	+		Sama_2746	0.25	-1.0
3,284,254	+		Sama_2746	0.25	-1.4
3,284,255	-		Sama_2746	0.25	-0.6
3,284,255	-		Sama_2746	0.25	-0.5
3,284,255	-		Sama_2746	0.25	-1.2
3,284,255	-		Sama_2746	0.25	-0.4
3,284,255	-		Sama_2746	0.25	-1.9
3,284,255	-		Sama_2746	0.25	-2.4
3,284,255	-		Sama_2746	0.25	-0.6
3,284,255	-		Sama_2746	0.25	-1.5
3,284,255	-		Sama_2746	0.25	-1.5
3,284,255	-		Sama_2746	0.25	-0.0
3,284,255	-		Sama_2746	0.25	-0.4
3,284,256	+		Sama_2746	0.25	-2.7
3,284,256	+		Sama_2746	0.25	-0.8
3,284,256	+		Sama_2746	0.25	+0.2
3,284,256	+		Sama_2746	0.25	-1.4
3,284,256	+		Sama_2746	0.25	-2.3
3,284,256	+		Sama_2746	0.25	-0.5
3,284,257	-		Sama_2746	0.25	-2.1
3,284,257	-		Sama_2746	0.25	-3.4
3,284,257	-		Sama_2746	0.25	-1.4
3,284,257	-		Sama_2746	0.25	-2.0
3,284,257	-		Sama_2746	0.25	-0.5
3,284,257	-		Sama_2746	0.25	-0.5
3,284,257	-		Sama_2746	0.25	-2.2
3,284,257	-		Sama_2746	0.25	-1.2
3,284,257	-		Sama_2746	0.25	-1.2
3,284,257	-		Sama_2746	0.25	-3.7
3,284,260	+		Sama_2746	0.25	-1.5
3,284,260	+		Sama_2746	0.25	-1.2
3,284,260	+		Sama_2746	0.25	-0.6
3,284,260	+		Sama_2746	0.25	-2.6
3,284,260	+		Sama_2746	0.25	-0.9
3,284,260	+		Sama_2746	0.25	-0.2
3,284,260	+		Sama_2746	0.25	-0.8
3,284,260	+		Sama_2746	0.25	-0.1
3,284,260	+		Sama_2746	0.25	-1.7
3,284,260	+		Sama_2746	0.25	-1.3
3,284,260	+		Sama_2746	0.25	-1.1
3,284,260	+		Sama_2746	0.25	-1.3
3,284,261	-		Sama_2746	0.25	-1.8
3,284,261	-		Sama_2746	0.25	-0.8
3,284,261	-		Sama_2746	0.25	-0.9
3,284,261	-		Sama_2746	0.25	-0.3
3,284,305	+		Sama_2746	0.27	-2.8
3,284,306	-		Sama_2746	0.27	-0.9
3,284,317	+		Sama_2746	0.27	-1.6
3,284,317	+		Sama_2746	0.27	-1.5
3,284,317	+		Sama_2746	0.27	-1.4
3,284,317	+		Sama_2746	0.27	-0.9
3,284,317	+		Sama_2746	0.27	-2.4
3,284,317	+		Sama_2746	0.27	-0.0
3,284,317	+		Sama_2746	0.27	-0.2
3,284,317	+		Sama_2746	0.27	-0.2
3,284,317	+		Sama_2746	0.27	-0.2
3,284,318	-		Sama_2746	0.27	-3.7
3,284,318	-		Sama_2746	0.27	-2.0
3,284,318	-		Sama_2746	0.27	+0.7
3,284,318	-		Sama_2746	0.27	-1.2
3,284,318	-		Sama_2746	0.27	-1.1
3,284,318	-		Sama_2746	0.27	-0.2
3,284,318	-		Sama_2746	0.27	-0.9
3,284,318	-		Sama_2746	0.27	-0.5
3,284,318	-		Sama_2746	0.27	+0.2
3,284,318	-		Sama_2746	0.27	-1.5
3,284,319	+		Sama_2746	0.28	-1.8
3,284,319	+		Sama_2746	0.28	-1.7
3,284,319	+		Sama_2746	0.28	-2.0
3,284,319	+		Sama_2746	0.28	-1.6
3,284,319	+		Sama_2746	0.28	-1.1
3,284,319	+		Sama_2746	0.28	-1.9
3,284,319	+		Sama_2746	0.28	-0.8
3,284,320	-		Sama_2746	0.28	-2.4
3,284,320	-		Sama_2746	0.28	-0.9
3,284,320	-		Sama_2746	0.28	-0.2
3,284,320	-		Sama_2746	0.28	-1.0
3,284,320	-		Sama_2746	0.28	-2.6
3,284,320	-		Sama_2746	0.28	-1.2
3,284,410	+		Sama_2746	0.32	-3.2
3,284,410	+		Sama_2746	0.32	-1.8
3,284,410	+		Sama_2746	0.32	-2.2
3,284,410	+		Sama_2746	0.32	-1.6
3,284,410	+		Sama_2746	0.32	+0.0
3,284,411	-		Sama_2746	0.32	-2.5
3,284,552	-		Sama_2746	0.38	-2.1
3,284,579	-		Sama_2746	0.39	-1.1
3,284,579	-		Sama_2746	0.39	-1.5
3,284,611	+		Sama_2746	0.41	-1.7
3,284,611	+		Sama_2746	0.41	-1.8
3,284,611	+		Sama_2746	0.41	-1.4
3,284,611	+		Sama_2746	0.41	-0.6
3,284,612	-		Sama_2746	0.41	-2.1
3,284,612	-		Sama_2746	0.41	-1.1
3,284,612	-		Sama_2746	0.41	-1.5
3,284,612	-		Sama_2746	0.41	-1.6
3,284,612	-		Sama_2746	0.41	-0.9
3,284,612	-		Sama_2746	0.41	-0.4
3,284,669	+		Sama_2746	0.43	-0.3
3,284,670	-		Sama_2746	0.43	-1.8
3,284,681	+		Sama_2746	0.44	-1.4
3,284,682	-		Sama_2746	0.44	-1.3
3,284,682	-		Sama_2746	0.44	-1.5
3,284,682	-		Sama_2746	0.44	-0.8
3,284,706	-		Sama_2746	0.45	-1.4
3,284,711	+		Sama_2746	0.45	-0.7
3,284,711	+		Sama_2746	0.45	-3.4
3,284,711	+		Sama_2746	0.45	-1.6
3,284,711	+		Sama_2746	0.45	-1.8
3,284,711	+		Sama_2746	0.45	-1.7
3,284,712	-		Sama_2746	0.45	-1.0
3,284,712	-		Sama_2746	0.45	-1.0
3,284,712	-		Sama_2746	0.45	-0.8
3,284,712	-		Sama_2746	0.45	-1.6
3,284,814	+		Sama_2746	0.50	-1.5
3,285,026	-		Sama_2746	0.59	-1.4
3,285,056	-		Sama_2746	0.61	-0.5
3,285,206	+		Sama_2746	0.67	-0.1
3,285,397	-		Sama_2746	0.76	-0.9
3,285,403	+		Sama_2746	0.76	-0.3
3,285,404	-		Sama_2746	0.76	-0.4
3,285,414	+		Sama_2746	0.77	+0.1
3,285,415	-		Sama_2746	0.77	+1.0
3,285,514	+		Sama_2746	0.81	-0.6
3,285,514	+		Sama_2746	0.81	-0.6
3,285,515	-		Sama_2746	0.81	-0.3
3,285,517	+		Sama_2746	0.81	-2.1
3,285,517	+		Sama_2746	0.81	-0.2
3,285,517	+		Sama_2746	0.81	-0.3
3,285,518	-		Sama_2746	0.82	-0.1
3,285,518	-		Sama_2746	0.82	-1.3
3,285,518	-		Sama_2746	0.82	-1.4
3,285,518	-		Sama_2746	0.82	-0.7
3,285,518	-		Sama_2746	0.82	-1.4
3,285,518	-		Sama_2746	0.82	-0.3
3,285,518	-		Sama_2746	0.82	+0.6
3,285,518	-		Sama_2746	0.82	-1.7
3,285,573	+		Sama_2746	0.84	-0.4
3,285,573	+		Sama_2746	0.84	-0.6
3,285,574	-		Sama_2746	0.84	-1.4
3,285,597	+		Sama_2746	0.85	+0.2
3,285,597	+		Sama_2746	0.85	-0.7
3,285,597	+		Sama_2746	0.85	-1.7
3,285,598	-		Sama_2746	0.85	-3.2
3,285,598	-		Sama_2746	0.85	-1.7
3,285,598	-		Sama_2746	0.85	-0.5
3,285,598	-		Sama_2746	0.85	-0.7
3,285,598	-		Sama_2746	0.85	+0.2
3,285,713	+				-0.6
3,285,744	+				-1.4
3,285,744	+				-1.4
3,285,744	+				-0.9
3,285,744	+				-0.1
3,285,744	+				-1.2
3,285,745	-				-1.8
3,285,745	-				+0.2
3,285,745	-				-0.8
3,285,748	+				-1.7
3,285,748	+				-2.4
3,285,748	+				-0.6
3,285,748	+				-0.2
3,285,749	-				-0.3
3,285,749	-				-0.1
3,285,749	-				-1.8
3,285,749	-				-0.9
3,285,798	+				-1.2
3,285,799	-				-0.2
3,285,799	-				-2.3
3,285,849	+				-0.5
3,285,849	+				-1.5
3,285,850	-				+0.8
3,285,919	-				-0.4
3,285,987	-				-1.3
3,285,987	-				-0.9
3,285,987	-				-1.9
3,285,992	+				-2.3
3,285,992	+				-1.1
3,285,993	-				-0.7
3,285,993	-				-1.1
3,285,993	-				-0.3
3,285,999	+				-0.9
3,285,999	+				-1.1
3,285,999	+				+0.1
3,285,999	+				-1.3
3,286,000	-				-1.0
3,286,000	-				-1.4
3,286,000	-				+0.4
3,286,009	-				-1.9
3,286,186	-		Sama_2747	0.19	-0.5
3,286,194	-		Sama_2747	0.20	-0.2
3,286,212	-		Sama_2747	0.21	+0.2
3,286,212	-		Sama_2747	0.21	-0.5
3,286,225	+		Sama_2747	0.22	-0.9
3,286,226	-		Sama_2747	0.22	-0.7
3,286,226	-		Sama_2747	0.22	-0.9
3,286,226	-		Sama_2747	0.22	-0.4
3,286,231	-		Sama_2747	0.22	-0.1
3,286,231	-		Sama_2747	0.22	-3.2
3,286,231	-		Sama_2747	0.22	-1.5
3,286,231	-		Sama_2747	0.22	-1.5
3,286,231	-		Sama_2747	0.22	-0.9
3,286,231	-		Sama_2747	0.22	-1.7
3,286,239	+		Sama_2747	0.23	-2.4
3,286,240	-		Sama_2747	0.23	-1.8
3,286,301	+		Sama_2747	0.27	-0.7
3,286,301	+		Sama_2747	0.27	+0.2
3,286,408	+		Sama_2747	0.35	-0.9
3,286,461	+		Sama_2747	0.39	-0.1
3,286,461	+		Sama_2747	0.39	-0.7
3,286,461	+		Sama_2747	0.39	-1.2
3,286,461	+		Sama_2747	0.39	+1.0
3,286,462	-		Sama_2747	0.39	-0.7
3,286,462	-		Sama_2747	0.39	-0.2
3,286,528	+		Sama_2747	0.44	-1.8
3,286,528	+		Sama_2747	0.44	+0.6
3,286,529	-		Sama_2747	0.44	-1.0
3,286,529	-		Sama_2747	0.44	-1.8
3,286,529	-		Sama_2747	0.44	-1.8
3,286,529	-		Sama_2747	0.44	+0.0
3,286,529	-		Sama_2747	0.44	-1.0
3,286,529	-		Sama_2747	0.44	-0.8
3,286,529	-		Sama_2747	0.44	-0.9
3,286,529	-		Sama_2747	0.44	-0.4
3,286,529	-		Sama_2747	0.44	+0.6
3,286,529	-		Sama_2747	0.44	+0.7
3,286,529	-		Sama_2747	0.44	-0.4
3,286,538	+		Sama_2747	0.44	-1.0
3,286,664	-		Sama_2747	0.53	-1.0
3,286,705	+		Sama_2747	0.56	-0.6
3,286,705	+		Sama_2747	0.56	+0.2
3,286,706	-		Sama_2747	0.56	-0.6
3,286,706	-		Sama_2747	0.56	-0.9
3,286,706	-		Sama_2747	0.56	-0.4
3,286,707	+		Sama_2747	0.56	-0.6
3,286,754	+		Sama_2747	0.60	-2.1
3,286,772	-		Sama_2747	0.61	-0.8
3,286,801	+		Sama_2747	0.63	-0.4
3,286,829	+		Sama_2747	0.65	+0.6
3,286,829	+		Sama_2747	0.65	-1.5
3,286,830	-		Sama_2747	0.65	-0.0
3,286,857	+		Sama_2747	0.67	+0.1
3,286,857	+		Sama_2747	0.67	-0.5
3,286,857	+		Sama_2747	0.67	-0.6
3,286,857	+		Sama_2747	0.67	+0.1
3,286,857	+		Sama_2747	0.67	-0.9
3,286,858	-		Sama_2747	0.67	-1.3
3,286,858	-		Sama_2747	0.67	-0.7
3,286,858	-		Sama_2747	0.67	-0.8
3,286,858	-		Sama_2747	0.67	-0.1
3,286,858	-		Sama_2747	0.67	-1.2
3,286,858	-		Sama_2747	0.67	-0.1
3,286,858	-		Sama_2747	0.67	-0.6