Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3456

Experiment: casaminos (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_3455 and Dshi_3456 are separated by 10 nucleotidesDshi_3456 and Dshi_3457 overlap by 8 nucleotidesDshi_3457 and Dshi_3458 are separated by 17 nucleotides Dshi_3455: Dshi_3455 - glucose inhibited division protein A (RefSeq), at 3,636,905 to 3,638,764 _3455 Dshi_3456: Dshi_3456 - methyltransferase GidB (RefSeq), at 3,638,775 to 3,639,362 _3456 Dshi_3457: Dshi_3457 - Cobyrinic acid ac-diamide synthase (RefSeq), at 3,639,355 to 3,640,161 _3457 Dshi_3458: Dshi_3458 - parB-like partition protein (RefSeq), at 3,640,179 to 3,641,078 _3458 Position (kb) 3638 3639 3640Strain fitness (log2 ratio) -1 0 1at 3639.134 kb on + strand, within Dshi_3456

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Per-strain Table

Position Strand Gene LocusTag Fraction casaminos (C)
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3,639,134 + Dshi_3456 0.61 -1.6

Or see this region's nucleotide sequence