Experiment: m.b. Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1694 and HP15_1695 are separated by 110 nucleotides HP15_1695 and HP15_1696 are separated by 183 nucleotides HP15_1696 and HP15_1697 are separated by 2 nucleotides HP15_1697 and HP15_1698 are separated by 202 nucleotides
HP15_1694: HP15_1694 - conserved hypothetical protein, at 1,783,983 to 1,785,311
_1694
HP15_1695: HP15_1695 - protein containing zinc finger, DksA/TraR C4-type domain, at 1,785,422 to 1,785,688
_1695
HP15_1696: HP15_1696 - transcriptional regulator, MerR family, at 1,785,872 to 1,786,288
_1696
HP15_1697: HP15_1697 - conserved hypothetical protein, at 1,786,291 to 1,787,217
_1697
HP15_1698: HP15_1698 - NADH-dependent flavin oxidoreductase, at 1,787,420 to 1,788,622
_1698
Position (kb)
1786
1787
1788 Strain fitness (log2 ratio)
-1
0
1 at 1785.507 kb on + strand, within HP15_1695 at 1785.516 kb on - strand, within HP15_1695 at 1785.688 kb on + strand at 1786.023 kb on - strand, within HP15_1696 at 1786.057 kb on + strand, within HP15_1696 at 1786.065 kb on - strand, within HP15_1696 at 1786.198 kb on - strand, within HP15_1696 at 1786.274 kb on - strand at 1786.289 kb on + strand at 1786.295 kb on - strand at 1786.295 kb on - strand at 1786.385 kb on - strand, within HP15_1697 at 1786.417 kb on - strand, within HP15_1697 at 1786.449 kb on - strand, within HP15_1697 at 1786.511 kb on + strand, within HP15_1697 at 1786.545 kb on - strand, within HP15_1697 at 1786.614 kb on + strand, within HP15_1697 at 1786.614 kb on + strand, within HP15_1697 at 1786.614 kb on + strand, within HP15_1697 at 1786.622 kb on - strand, within HP15_1697 at 1786.682 kb on - strand, within HP15_1697 at 1786.968 kb on - strand, within HP15_1697 at 1787.079 kb on - strand, within HP15_1697 at 1787.235 kb on + strand at 1787.260 kb on + strand at 1787.269 kb on + strand at 1787.383 kb on - strand at 1787.600 kb on + strand, within HP15_1698 at 1787.615 kb on + strand, within HP15_1698 at 1787.644 kb on + strand, within HP15_1698 at 1787.950 kb on - strand, within HP15_1698 at 1787.971 kb on - strand, within HP15_1698 at 1788.144 kb on + strand, within HP15_1698 at 1788.188 kb on + strand, within HP15_1698 at 1788.201 kb on - strand, within HP15_1698
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 5 vol% remove 1,785,507 + HP15_1695 0.32 +0.3 1,785,516 - HP15_1695 0.35 +0.9 1,785,688 + -1.1 1,786,023 - HP15_1696 0.36 -0.2 1,786,057 + HP15_1696 0.44 +0.7 1,786,065 - HP15_1696 0.46 -0.2 1,786,198 - HP15_1696 0.78 -1.0 1,786,274 - +0.2 1,786,289 + -1.1 1,786,295 - +0.3 1,786,295 - +0.0 1,786,385 - HP15_1697 0.10 -1.7 1,786,417 - HP15_1697 0.14 -0.3 1,786,449 - HP15_1697 0.17 -0.4 1,786,511 + HP15_1697 0.24 -1.0 1,786,545 - HP15_1697 0.27 -0.2 1,786,614 + HP15_1697 0.35 -0.3 1,786,614 + HP15_1697 0.35 -0.7 1,786,614 + HP15_1697 0.35 +1.3 1,786,622 - HP15_1697 0.36 -0.3 1,786,682 - HP15_1697 0.42 +0.5 1,786,968 - HP15_1697 0.73 -0.7 1,787,079 - HP15_1697 0.85 +0.1 1,787,235 + +0.6 1,787,260 + -0.1 1,787,269 + -0.5 1,787,383 - -0.1 1,787,600 + HP15_1698 0.15 -0.4 1,787,615 + HP15_1698 0.16 -0.1 1,787,644 + HP15_1698 0.19 +0.1 1,787,950 - HP15_1698 0.44 +0.6 1,787,971 - HP15_1698 0.46 -0.1 1,788,144 + HP15_1698 0.60 -0.3 1,788,188 + HP15_1698 0.64 -0.3 1,788,201 - HP15_1698 0.65 +0.2
Or see this region's nucleotide sequence