Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2693 and Dsui_2694 are separated by 104 nucleotides Dsui_2694 and Dsui_2695 are separated by 326 nucleotides
Dsui_2693: Dsui_2693 - translation elongation factor Ts, at 2,844,814 to 2,845,710
_2693
Dsui_2694: Dsui_2694 - ribosomal protein S2, at 2,845,815 to 2,846,564
_2694
Dsui_2695: Dsui_2695 - methionine aminopeptidase, type I, at 2,846,891 to 2,847,688
_2695
Position (kb)
2845
2846
2847 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2845.898 kb on - strand, within Dsui_2694 at 2846.830 kb on + strand at 2846.830 kb on + strand at 2846.830 kb on + strand at 2846.844 kb on - strand at 2846.847 kb on + strand at 2846.847 kb on + strand at 2846.860 kb on + strand at 2846.871 kb on + strand at 2846.982 kb on + strand, within Dsui_2695 at 2846.984 kb on - strand, within Dsui_2695 at 2847.065 kb on + strand, within Dsui_2695 at 2847.126 kb on + strand, within Dsui_2695 at 2847.134 kb on - strand, within Dsui_2695 at 2847.210 kb on - strand at 2847.229 kb on - strand, within Dsui_2695 at 2847.254 kb on + strand, within Dsui_2695 at 2847.317 kb on - strand, within Dsui_2695 at 2847.319 kb on + strand, within Dsui_2695 at 2847.337 kb on + strand, within Dsui_2695 at 2847.449 kb on + strand, within Dsui_2695 at 2847.450 kb on - strand, within Dsui_2695 at 2847.466 kb on + strand, within Dsui_2695 at 2847.494 kb on + strand, within Dsui_2695 at 2847.515 kb on - strand, within Dsui_2695
Per-strain Table
Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5 remove 2,845,898 - Dsui_2694 0.11 -0.9 2,846,830 + +0.7 2,846,830 + -1.1 2,846,830 + +0.6 2,846,844 - +1.5 2,846,847 + -0.6 2,846,847 + -0.5 2,846,860 + -0.8 2,846,871 + +0.1 2,846,982 + Dsui_2695 0.11 -0.0 2,846,984 - Dsui_2695 0.12 -1.5 2,847,065 + Dsui_2695 0.22 -0.3 2,847,126 + Dsui_2695 0.29 +1.1 2,847,134 - Dsui_2695 0.30 +0.7 2,847,210 - -0.3 2,847,229 - Dsui_2695 0.42 -0.3 2,847,254 + Dsui_2695 0.45 +0.2 2,847,317 - Dsui_2695 0.53 +0.1 2,847,319 + Dsui_2695 0.54 -0.3 2,847,337 + Dsui_2695 0.56 -0.5 2,847,449 + Dsui_2695 0.70 -0.6 2,847,450 - Dsui_2695 0.70 -1.8 2,847,466 + Dsui_2695 0.72 +1.0 2,847,494 + Dsui_2695 0.76 -0.2 2,847,515 - Dsui_2695 0.78 +1.8
Or see this region's nucleotide sequence