Strain Fitness in Dechlorosoma suillum PS around Dsui_2141

Experiment: Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2140 and Dsui_2141 overlap by 1 nucleotidesDsui_2141 and Dsui_2142 overlap by 26 nucleotides Dsui_2140: Dsui_2140 - hypothetical protein, at 2,268,527 to 2,270,617 _2140 Dsui_2141: Dsui_2141 - flagellar motor protein, at 2,270,617 to 2,271,261 _2141 Dsui_2142: Dsui_2142 - Protein of unknown function (DUF2894), at 2,271,236 to 2,272,111 _2142 Position (kb) 2270 2271 2272Strain fitness (log2 ratio) -2 -1 0 1 2at 2269.670 kb on - strand, within Dsui_2140at 2269.892 kb on - strandat 2269.986 kb on - strandat 2270.009 kb on + strand, within Dsui_2140at 2270.014 kb on + strand, within Dsui_2140at 2270.132 kb on + strand, within Dsui_2140at 2270.214 kb on + strand, within Dsui_2140at 2270.224 kb on + strand, within Dsui_2140at 2270.381 kb on + strand, within Dsui_2140at 2270.381 kb on + strand, within Dsui_2140at 2270.393 kb on + strand, within Dsui_2140at 2270.580 kb on + strandat 2270.634 kb on - strandat 2270.650 kb on + strandat 2270.699 kb on + strand, within Dsui_2141at 2270.699 kb on + strand, within Dsui_2141at 2270.753 kb on - strand, within Dsui_2141at 2270.753 kb on - strandat 2270.815 kb on + strand, within Dsui_2141at 2270.889 kb on + strand, within Dsui_2141at 2271.020 kb on - strand, within Dsui_2141at 2271.154 kb on - strandat 2271.264 kb on - strandat 2271.866 kb on + strand, within Dsui_2142at 2271.877 kb on + strand, within Dsui_2142at 2271.885 kb on - strandat 2272.006 kb on + strandat 2272.019 kb on - strandat 2272.019 kb on - strandat 2272.038 kb on - strandat 2272.184 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Anaerobic growth in rich media with perchlorate electron acceptor, 1000 uM Stressor (H2S) spiked in when cells reach OD 0.5
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2,269,670 - Dsui_2140 0.55 +0.6
2,269,892 - -0.8
2,269,986 - +0.0
2,270,009 + Dsui_2140 0.71 -0.5
2,270,014 + Dsui_2140 0.71 -0.5
2,270,132 + Dsui_2140 0.77 -2.3
2,270,214 + Dsui_2140 0.81 -0.0
2,270,224 + Dsui_2140 0.81 +0.4
2,270,381 + Dsui_2140 0.89 +0.1
2,270,381 + Dsui_2140 0.89 +0.2
2,270,393 + Dsui_2140 0.89 +0.0
2,270,580 + +0.5
2,270,634 - +2.0
2,270,650 + +0.3
2,270,699 + Dsui_2141 0.13 -0.8
2,270,699 + Dsui_2141 0.13 -0.9
2,270,753 - Dsui_2141 0.21 -0.5
2,270,753 - -1.3
2,270,815 + Dsui_2141 0.31 -1.7
2,270,889 + Dsui_2141 0.42 -0.6
2,271,020 - Dsui_2141 0.62 -0.2
2,271,154 - -0.4
2,271,264 - -0.2
2,271,866 + Dsui_2142 0.72 +0.3
2,271,877 + Dsui_2142 0.73 +0.9
2,271,885 - -0.5
2,272,006 + +1.0
2,272,019 - +1.0
2,272,019 - +0.1
2,272,038 - -2.1
2,272,184 - -0.6

Or see this region's nucleotide sequence