Strain Fitness in Shewanella amazonensis SB2B around Sama_3318

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,946,548	+		Sama_3315	0.81	-1.1
3,946,548	+		Sama_3315	0.81	-0.2
3,946,548	+		Sama_3315	0.81	-1.7
3,946,548	+		Sama_3315	0.81	-1.9
3,946,548	+		Sama_3315	0.81	-1.7
3,946,548	+		Sama_3315	0.81	+0.4
3,946,548	+		Sama_3315	0.81	+1.6
3,946,548	+		Sama_3315	0.81	+1.2
3,946,548	+		Sama_3315	0.81	-1.0
3,946,549	-		Sama_3315	0.81	+1.4
3,946,549	-		Sama_3315	0.81	-1.3
3,946,549	-		Sama_3315	0.81	+0.4
3,946,549	-		Sama_3315	0.81	-0.9
3,946,549	-		Sama_3315	0.81	+1.0
3,946,549	-		Sama_3315	0.81	+1.9
3,946,568	+		Sama_3315	0.84	-1.0
3,946,568	+		Sama_3315	0.84	+0.5
3,946,568	+		Sama_3315	0.84	+0.4
3,946,568	+		Sama_3315	0.84	+0.3
3,946,568	+		Sama_3315	0.84	-1.7
3,946,568	+		Sama_3315	0.84	-1.9
3,946,568	+		Sama_3315	0.84	+1.7
3,946,568	+		Sama_3315	0.84	-1.3
3,946,568	+		Sama_3315	0.84	+0.2
3,946,568	+		Sama_3315	0.84	+0.1
3,946,568	+		Sama_3315	0.84	-1.6
3,946,568	+		Sama_3315	0.84	+2.6
3,946,569	-		Sama_3315	0.84	-1.9
3,946,569	-		Sama_3315	0.84	+1.7
3,946,569	-		Sama_3315	0.84	-3.7
3,946,666	+				+1.3
3,946,666	+				-0.9
3,946,667	-				+2.2
3,946,667	-				+1.2
3,946,667	-				-1.3
3,946,715	+				-1.5
3,946,715	+				-0.3
3,946,715	+				-0.5
3,946,715	+				+2.3
3,946,715	+				+0.2
3,946,716	-				+1.0
3,946,716	-				-0.7
3,946,716	-				-0.4
3,946,762	+				+0.8
3,946,768	+				-1.6
3,946,768	+				+2.0
3,946,768	+				+2.8
3,946,768	+				-2.2
3,946,776	+				-1.2
3,946,776	+				-0.0
3,946,777	-				-0.4
3,946,777	-				+3.5
3,946,777	-				+0.3
3,946,777	-				-0.1
3,946,777	-				+0.2
3,946,783	-				-0.7
3,946,783	-				-0.6
3,946,810	+				+0.5
3,946,810	+				+0.9
3,946,811	-				-1.8
3,946,834	+				-0.6
3,946,842	+				-0.8
3,946,842	+				-2.1
3,946,843	-				-0.9
3,946,892	-		Sama_3316	0.26	-0.3
3,946,985	+		Sama_3316	0.61	+0.3
3,946,985	+		Sama_3316	0.61	+0.8
3,946,985	+		Sama_3316	0.61	-1.4
3,947,078	+				-0.9
3,947,078	+				+1.1
3,947,078	+				-3.6
3,947,078	+				-1.7
3,947,078	+				-1.1
3,947,078	+				-0.0
3,947,079	-				-2.7
3,947,079	-				+0.7
3,947,079	-				+0.3
3,947,079	-				+1.1
3,947,079	-				-0.1
3,947,079	-				-0.0
3,947,079	-				-1.3
3,947,079	-				-1.2
3,947,083	+				-1.9
3,947,084	-				-0.0
3,947,129	-		Sama_3317	0.12	-0.2
3,947,188	-		Sama_3317	0.28	+1.0
3,947,221	+		Sama_3317	0.38	+0.4
3,947,222	-		Sama_3317	0.38	-0.1
3,947,222	-		Sama_3317	0.38	-0.0
3,947,222	-		Sama_3317	0.38	-0.6
3,947,232	-		Sama_3317	0.41	-0.2
3,947,242	+		Sama_3317	0.44	+0.4
3,947,242	+		Sama_3317	0.44	+1.8
3,947,242	+		Sama_3317	0.44	+1.5
3,947,242	+		Sama_3317	0.44	+0.3
3,947,242	+		Sama_3317	0.44	+2.2
3,947,243	-		Sama_3317	0.44	-0.2
3,947,243	-		Sama_3317	0.44	-0.0
3,947,243	-		Sama_3317	0.44	+0.7
3,947,243	-		Sama_3317	0.44	-2.7
3,947,243	-		Sama_3317	0.44	+1.9
3,947,243	-		Sama_3317	0.44	-2.8
3,947,374	+		Sama_3317	0.81	-0.7
3,947,374	+		Sama_3317	0.81	-1.0
3,947,374	+		Sama_3317	0.81	-0.2
3,947,374	+		Sama_3317	0.81	+0.3
3,947,374	+		Sama_3317	0.81	+0.6
3,947,374	+		Sama_3317	0.81	-2.3
3,947,374	+		Sama_3317	0.81	+4.9
3,947,374	+		Sama_3317	0.81	-1.0
3,947,374	+		Sama_3317	0.81	-1.0
3,947,374	+		Sama_3317	0.81	+0.4
3,947,375	-		Sama_3317	0.81	-2.7
3,947,375	-		Sama_3317	0.81	+2.5
3,947,375	-		Sama_3317	0.81	-1.4
3,947,375	-		Sama_3317	0.81	+0.1
3,947,375	-		Sama_3317	0.81	-0.6
3,947,375	-		Sama_3317	0.81	+4.3
3,947,375	-		Sama_3317	0.81	+0.6
3,947,375	-		Sama_3317	0.81	+0.1
3,947,375	-		Sama_3317	0.81	+1.5
3,947,375	-		Sama_3317	0.81	-1.2
3,947,375	-		Sama_3317	0.81	-0.6
3,947,375	-		Sama_3317	0.81	-0.0
3,947,375	-		Sama_3317	0.81	-0.5
3,947,375	-		Sama_3317	0.81	+1.2
3,947,375	-		Sama_3317	0.81	+0.4
3,947,391	+		Sama_3317	0.86	-0.3
3,947,391	+		Sama_3317	0.86	+0.7
3,947,391	+		Sama_3317	0.86	-1.0
3,947,391	+		Sama_3317	0.86	+2.0
3,947,391	+		Sama_3317	0.86	+2.0
3,947,392	-		Sama_3317	0.86	+0.8
3,947,392	-		Sama_3317	0.86	-1.8
3,947,392	-		Sama_3317	0.86	-0.6
3,947,392	-		Sama_3317	0.86	-0.9
3,947,392	-		Sama_3317	0.86	-1.6
3,947,456	+				-1.7
3,947,456	+				+1.5
3,947,456	+				+0.8
3,947,456	+				-1.7
3,947,472	-				+2.0
3,947,518	-				+1.2
3,947,537	+				+3.9
3,947,537	+				-1.3
3,947,538	-				-2.3
3,947,616	-				-0.5
3,947,653	-		Sama_3318	0.10	-0.0
3,947,691	+		Sama_3318	0.13	-0.9
3,947,692	-		Sama_3318	0.13	+3.1
3,947,692	-		Sama_3318	0.13	-0.7
3,947,692	-		Sama_3318	0.13	-0.2
3,947,723	+		Sama_3318	0.15	-1.1
3,947,723	+		Sama_3318	0.15	-2.3
3,947,724	-		Sama_3318	0.15	-1.9
3,947,724	-		Sama_3318	0.15	+1.2
3,947,793	+		Sama_3318	0.20	-1.3
3,947,888	+		Sama_3318	0.26	+1.3
3,947,889	-		Sama_3318	0.26	-2.7
3,947,987	+		Sama_3318	0.32	-2.5
3,947,987	+		Sama_3318	0.32	-2.2
3,947,987	+		Sama_3318	0.32	+1.0
3,947,988	-		Sama_3318	0.32	-1.1
3,947,988	-		Sama_3318	0.32	-0.0
3,947,997	+		Sama_3318	0.33	-0.3
3,947,997	+		Sama_3318	0.33	+2.0
3,947,997	+		Sama_3318	0.33	-2.2
3,947,998	-		Sama_3318	0.33	+2.5
3,947,998	-		Sama_3318	0.33	+0.8
3,947,998	-		Sama_3318	0.33	-0.4
3,948,008	+		Sama_3318	0.34	-1.2
3,948,008	+		Sama_3318	0.34	+1.7
3,948,008	+		Sama_3318	0.34	+2.0
3,948,009	-		Sama_3318	0.34	+2.0
3,948,009	-		Sama_3318	0.34	-0.6
3,948,059	+		Sama_3318	0.37	-1.7
3,948,059	+		Sama_3318	0.37	-1.6
3,948,059	+		Sama_3318	0.37	+0.5
3,948,059	+		Sama_3318	0.37	-0.2
3,948,059	+		Sama_3318	0.37	-0.1
3,948,059	+		Sama_3318	0.37	-1.8
3,948,059	+		Sama_3318	0.37	-1.5
3,948,059	+		Sama_3318	0.37	+1.2
3,948,059	+		Sama_3318	0.37	+1.0
3,948,059	+		Sama_3318	0.37	-0.0
3,948,059	+		Sama_3318	0.37	+2.6
3,948,059	+		Sama_3318	0.37	-1.3
3,948,059	+		Sama_3318	0.37	-1.9
3,948,059	+		Sama_3318	0.37	-0.3
3,948,059	+		Sama_3318	0.37	-2.1
3,948,059	+		Sama_3318	0.37	-1.9
3,948,059	+		Sama_3318	0.37	-1.0
3,948,059	+		Sama_3318	0.37	-1.5
3,948,059	+		Sama_3318	0.37	-0.1
3,948,059	+		Sama_3318	0.37	+0.6
3,948,059	+		Sama_3318	0.37	-2.2
3,948,059	+		Sama_3318	0.37	+1.2
3,948,059	+		Sama_3318	0.37	-2.1
3,948,060	-		Sama_3318	0.37	+1.0
3,948,060	-		Sama_3318	0.37	+0.6
3,948,060	-		Sama_3318	0.37	-0.1
3,948,060	-		Sama_3318	0.37	+1.4
3,948,060	-		Sama_3318	0.37	+0.1
3,948,060	-		Sama_3318	0.37	-2.0
3,948,060	-		Sama_3318	0.37	+0.3
3,948,060	-		Sama_3318	0.37	-0.3
3,948,060	-		Sama_3318	0.37	+0.8
3,948,060	-		Sama_3318	0.37	-1.5
3,948,060	-		Sama_3318	0.37	-1.6
3,948,060	-		Sama_3318	0.37	+2.3
3,948,060	-		Sama_3318	0.37	+0.4
3,948,060	-		Sama_3318	0.37	-2.1
3,948,060	-		Sama_3318	0.37	+0.1
3,948,060	-		Sama_3318	0.37	+5.0
3,948,060	-		Sama_3318	0.37	-1.0
3,948,060	-		Sama_3318	0.37	+0.7
3,948,060	-		Sama_3318	0.37	-0.0
3,948,060	-		Sama_3318	0.37	-2.0
3,948,060	-		Sama_3318	0.37	-0.8
3,948,060	-		Sama_3318	0.37	+1.6
3,948,060	-		Sama_3318	0.37	-1.2
3,948,060	-		Sama_3318	0.37	+0.4
3,948,060	-		Sama_3318	0.37	+0.6
3,948,060	-		Sama_3318	0.37	-0.7
3,948,060	-		Sama_3318	0.37	-2.0
3,948,063	+		Sama_3318	0.37	+1.9
3,948,063	+		Sama_3318	0.37	-2.4
3,948,063	+		Sama_3318	0.37	-1.2
3,948,063	+		Sama_3318	0.37	-1.2
3,948,063	+		Sama_3318	0.37	+1.6
3,948,063	+		Sama_3318	0.37	-1.6
3,948,063	+		Sama_3318	0.37	-0.7
3,948,063	+		Sama_3318	0.37	-0.2
3,948,063	+		Sama_3318	0.37	-0.6
3,948,063	+		Sama_3318	0.37	-2.1
3,948,063	+		Sama_3318	0.37	+1.2
3,948,064	-		Sama_3318	0.37	-1.5
3,948,064	-		Sama_3318	0.37	+1.0
3,948,064	-		Sama_3318	0.37	-2.4
3,948,064	-		Sama_3318	0.37	-0.2
3,948,064	-		Sama_3318	0.37	+1.7
3,948,064	-		Sama_3318	0.37	-1.6
3,948,064	-		Sama_3318	0.37	-0.8
3,948,064	-		Sama_3318	0.37	+2.1
3,948,064	-		Sama_3318	0.37	-0.3
3,948,064	-		Sama_3318	0.37	+1.6
3,948,064	-		Sama_3318	0.37	-1.2
3,948,064	-		Sama_3318	0.37	-2.1
3,948,064	-		Sama_3318	0.37	-2.4
3,948,064	-		Sama_3318	0.37	-2.1
3,948,064	-		Sama_3318	0.37	+0.8
3,948,156	+		Sama_3318	0.43	-2.3
3,948,156	+		Sama_3318	0.43	-2.6
3,948,156	+		Sama_3318	0.43	-2.0
3,948,156	+		Sama_3318	0.43	-0.4
3,948,317	+		Sama_3318	0.54	+0.1
3,948,318	-		Sama_3318	0.54	-1.2
3,948,318	-		Sama_3318	0.54	+0.2
3,948,341	+		Sama_3318	0.56	-0.7
3,948,341	+		Sama_3318	0.56	+1.0
3,948,342	-		Sama_3318	0.56	+3.2
3,948,342	-		Sama_3318	0.56	+0.5
3,948,342	-		Sama_3318	0.56	-0.7
3,948,342	-		Sama_3318	0.56	-0.4
3,948,374	+		Sama_3318	0.58	-0.7
3,948,374	+		Sama_3318	0.58	-0.1
3,948,374	+		Sama_3318	0.58	+0.1
3,948,399	+		Sama_3318	0.59	-1.4
3,948,400	-		Sama_3318	0.59	+0.6
3,948,425	+		Sama_3318	0.61	-0.0
3,948,443	+		Sama_3318	0.62	+0.9
3,948,443	+		Sama_3318	0.62	-0.7
3,948,502	+		Sama_3318	0.66	+2.0
3,948,502	+		Sama_3318	0.66	+3.7
3,948,502	+		Sama_3318	0.66	+1.2
3,948,502	+		Sama_3318	0.66	-1.4
3,948,503	-		Sama_3318	0.66	-0.2
3,948,503	-		Sama_3318	0.66	+4.3
3,948,537	+		Sama_3318	0.68	+0.4
3,948,537	+		Sama_3318	0.68	-1.5
3,948,538	-		Sama_3318	0.68	+3.4
3,948,538	-		Sama_3318	0.68	-0.3
3,948,538	-		Sama_3318	0.68	-1.5
3,948,565	+		Sama_3318	0.70	+1.7
3,948,565	+		Sama_3318	0.70	-0.9
3,948,565	+		Sama_3318	0.70	+0.5
3,948,565	+		Sama_3318	0.70	-0.6
3,948,565	+		Sama_3318	0.70	-1.0
3,948,565	+		Sama_3318	0.70	-1.9
3,948,566	-		Sama_3318	0.70	-1.3
3,948,566	-		Sama_3318	0.70	-2.0
3,948,566	-		Sama_3318	0.70	-0.2
3,948,566	-		Sama_3318	0.70	-1.6
3,948,566	-		Sama_3318	0.70	+1.2
3,948,566	-		Sama_3318	0.70	+1.1
3,948,566	-		Sama_3318	0.70	+1.9
3,948,566	-		Sama_3318	0.70	-1.2
3,948,592	+		Sama_3318	0.72	-0.1
3,948,605	+		Sama_3318	0.73	-1.0
3,948,606	-		Sama_3318	0.73	-0.4
3,948,644	+		Sama_3318	0.75	-1.9
3,948,644	+		Sama_3318	0.75	+1.1
3,948,644	+		Sama_3318	0.75	-1.9
3,948,645	-		Sama_3318	0.75	-0.4
3,948,681	-		Sama_3318	0.78	+0.8
3,948,774	+		Sama_3318	0.84	-1.3
3,948,775	-		Sama_3318	0.84	-2.8
3,948,775	-		Sama_3318	0.84	+0.3
3,948,838	+		Sama_3318	0.88	+1.2
3,948,839	-		Sama_3318	0.88	+0.3
3,948,858	-		Sama_3318	0.89	+2.1
3,948,860	+		Sama_3318	0.90	+0.2
3,948,860	+		Sama_3318	0.90	+0.5
3,948,860	+		Sama_3318	0.90	-0.7
3,948,860	+		Sama_3318	0.90	+0.9
3,948,860	+		Sama_3318	0.90	-2.0
3,948,860	+		Sama_3318	0.90	+1.8
3,948,860	+		Sama_3318	0.90	-1.4
3,948,860	+		Sama_3318	0.90	-1.3
3,948,860	+		Sama_3318	0.90	+3.9
3,948,860	+		Sama_3318	0.90	+0.3
3,948,860	+		Sama_3318	0.90	-0.6
3,948,860	+		Sama_3318	0.90	-0.2
3,948,860	+		Sama_3318	0.90	+0.2
3,948,861	-		Sama_3318	0.90	-0.8
3,948,861	-		Sama_3318	0.90	-0.6
3,948,861	-		Sama_3318	0.90	-1.9
3,948,861	-		Sama_3318	0.90	-0.0
3,948,861	-		Sama_3318	0.90	-1.3
3,948,861	-		Sama_3318	0.90	+1.3
3,948,861	-		Sama_3318	0.90	-0.7
3,948,865	-		Sama_3318	0.90	+2.8
3,948,865	-		Sama_3318	0.90	+0.5
3,948,865	-		Sama_3318	0.90	+1.9
3,948,868	+				+1.2
3,948,869	-				-1.7
3,948,872	+				+3.5
3,948,872	+				-1.2
3,948,872	+				-0.5
3,948,872	+				-0.9
3,948,872	+				+2.4
3,948,872	+				-0.2
3,948,873	-				-2.1
3,948,873	-				-1.9
3,948,873	-				-1.0
3,948,873	-				-0.7
3,948,873	-				+0.6
3,948,873	-				+1.0
3,948,941	+				+2.4
3,948,941	+				+1.7
3,948,941	+				-2.1
3,948,941	+				-1.2
3,948,941	+				+0.3
3,948,941	+				-0.3
3,948,942	-				+1.6
3,948,942	-				-1.6
3,948,978	+				+0.7
3,948,980	+				+1.5
3,948,981	+				-0.2
3,948,981	+				-0.4
3,948,982	-				-1.1
3,948,982	-				+0.6
3,948,982	-				-0.7
3,948,992	+				+2.2
3,948,993	-				+2.5
3,948,993	-				+0.2
3,949,048	+				-2.5
3,949,064	+				+1.0
3,949,065	-				-0.9
3,949,118	+				+2.6
3,949,119	-				-1.0
3,949,119	-				-2.3
3,949,119	-				-1.3
3,949,121	+				-1.0
3,949,121	+				+0.7
3,949,121	+				-1.3
3,949,121	+				-0.6
3,949,121	+				+4.0
3,949,122	-				-0.6
3,949,128	-				-2.1
3,949,205	+				-1.0
3,949,205	+				+0.5
3,949,205	+				-2.6
3,949,206	-				+0.3
3,949,323	+		Sama_3319	0.64	+0.1
3,949,323	+		Sama_3319	0.64	+1.6
3,949,323	+		Sama_3319	0.64	+1.0
3,949,324	-		Sama_3319	0.65	-2.0
3,949,324	-		Sama_3319	0.65	-2.3
3,949,324	-		Sama_3319	0.65	-1.2
3,949,324	-		Sama_3319	0.65	-0.7
3,949,398	+				-2.8
3,949,398	+				+0.6
3,949,398	+				-1.1
3,949,398	+				-0.8
3,949,398	+				+2.9
3,949,399	-				+2.5
3,949,399	-				-0.4
3,949,399	-				-0.6
3,949,399	-				-2.7
3,949,399	-				+0.2
3,949,433	+		Sama_3320	0.13	-0.9
3,949,433	+		Sama_3320	0.13	-0.6
3,949,433	+		Sama_3320	0.13	+1.4
3,949,433	+		Sama_3320	0.13	+3.6
3,949,433	+		Sama_3320	0.13	-0.3
3,949,434	-		Sama_3320	0.14	+0.3
3,949,434	-		Sama_3320	0.14	+3.0
3,949,434	-		Sama_3320	0.14	+3.3
3,949,434	-		Sama_3320	0.14	+2.0
3,949,434	-		Sama_3320	0.14	-1.3
3,949,436	+		Sama_3320	0.14	-2.2
3,949,436	+		Sama_3320	0.14	-0.7
3,949,436	+		Sama_3320	0.14	+2.1
3,949,466	-		Sama_3320	0.27	-2.0
3,949,593	+		Sama_3320	0.78	-3.1
3,949,593	+		Sama_3320	0.78	+2.0
3,949,593	+		Sama_3320	0.78	-2.1
3,949,593	+		Sama_3320	0.78	+1.0
3,949,593	+		Sama_3320	0.78	+0.2
3,949,593	+		Sama_3320	0.78	+0.1
3,949,593	+		Sama_3320	0.78	+1.0
3,949,593	+		Sama_3320	0.78	+1.6
3,949,593	+		Sama_3320	0.78	+0.3
3,949,594	-		Sama_3320	0.78	+3.6
3,949,594	-		Sama_3320	0.78	-0.6
3,949,594	-		Sama_3320	0.78	+1.9
3,949,594	-		Sama_3320	0.78	-0.3
3,949,594	-		Sama_3320	0.78	-1.5
3,949,594	-		Sama_3320	0.78	-1.7
3,949,594	-		Sama_3320	0.78	+2.3
3,949,594	-		Sama_3320	0.78	-0.1
3,949,594	-		Sama_3320	0.78	+2.3
3,949,594	-		Sama_3320	0.78	-0.7
3,949,626	-				-3.1
3,949,633	+				+1.2
3,949,633	+				-0.2
3,949,639	+				-0.0
3,949,639	+				-1.7
3,949,640	-				+1.4
3,949,640	-				-0.9
3,949,690	-				-0.1
3,949,723	-				-0.2
3,949,726	+				-2.2
3,949,726	+				+0.5
3,949,726	+				+2.1
3,949,726	+				+0.5
3,949,726	+				-2.8
3,949,739	+				+1.3
3,949,739	+				+0.1
3,949,758	+				+1.2
3,949,758	+				+0.2
3,949,805	+				+0.3
3,949,805	+				+0.5
3,949,805	+				+2.8
3,949,825	+				-0.4