Strain Fitness in Shewanella amazonensis SB2B around Sama_3157

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,742,977	-		Sama_3155	0.26	+1.4
3,742,977	-		Sama_3155	0.26	-0.4
3,743,000	+		Sama_3155	0.31	+2.0
3,743,000	+		Sama_3155	0.31	+1.8
3,743,000	+		Sama_3155	0.31	-2.2
3,743,001	-		Sama_3155	0.31	-1.4
3,743,001	-		Sama_3155	0.31	-0.1
3,743,024	+		Sama_3155	0.35	+0.6
3,743,025	-		Sama_3155	0.36	-0.0
3,743,077	+		Sama_3155	0.46	+1.1
3,743,078	-		Sama_3155	0.46	-0.5
3,743,078	-		Sama_3155	0.46	-1.7
3,743,168	+		Sama_3155	0.64	+0.5
3,743,168	+		Sama_3155	0.64	-1.9
3,743,168	+		Sama_3155	0.64	+0.2
3,743,168	+		Sama_3155	0.64	+1.2
3,743,168	+		Sama_3155	0.64	+0.5
3,743,169	-		Sama_3155	0.64	+1.7
3,743,169	-		Sama_3155	0.64	+1.4
3,743,195	+		Sama_3155	0.69	+0.0
3,743,195	+		Sama_3155	0.69	-1.1
3,743,196	-		Sama_3155	0.69	-0.6
3,743,226	+		Sama_3155	0.75	-0.6
3,743,227	-		Sama_3155	0.75	-0.3
3,743,352	+				+0.8
3,743,352	+				+0.8
3,743,352	+				-2.2
3,743,353	-				-2.4
3,743,353	-				-1.3
3,743,353	-				-0.4
3,743,353	-				-1.9
3,743,353	-				+0.9
3,743,384	-				+1.3
3,743,416	+				-0.2
3,743,416	+				-1.2
3,743,417	-				+0.7
3,743,491	+		Sama_3156	0.10	+1.9
3,743,491	+		Sama_3156	0.10	-0.1
3,743,491	+		Sama_3156	0.10	+1.9
3,743,492	-		Sama_3156	0.10	+1.7
3,743,492	-		Sama_3156	0.10	+0.4
3,743,492	-		Sama_3156	0.10	-2.9
3,743,492	-		Sama_3156	0.10	-1.5
3,743,498	+		Sama_3156	0.12	-2.4
3,743,498	+		Sama_3156	0.12	-1.3
3,743,498	+		Sama_3156	0.12	+1.4
3,743,498	+		Sama_3156	0.12	-1.1
3,743,498	+		Sama_3156	0.12	+0.5
3,743,499	-		Sama_3156	0.12	+3.0
3,743,499	-		Sama_3156	0.12	-1.7
3,743,499	-		Sama_3156	0.12	-1.7
3,743,499	-		Sama_3156	0.12	+3.0
3,743,499	-		Sama_3156	0.12	+0.6
3,743,510	+		Sama_3156	0.15	-1.7
3,743,511	-		Sama_3156	0.15	-0.8
3,743,511	-		Sama_3156	0.15	-0.8
3,743,511	-		Sama_3156	0.15	-1.5
3,743,511	-		Sama_3156	0.15	+4.1
3,743,511	-		Sama_3156	0.15	+0.6
3,743,511	-		Sama_3156	0.15	+1.4
3,743,547	+		Sama_3156	0.24	+2.3
3,743,547	+		Sama_3156	0.24	-3.2
3,743,548	-		Sama_3156	0.24	+0.7
3,743,548	-		Sama_3156	0.24	-0.7
3,743,553	+		Sama_3156	0.25	+4.7
3,743,553	+		Sama_3156	0.25	+2.0
3,743,554	-		Sama_3156	0.26	+0.5
3,743,554	-		Sama_3156	0.26	+3.6
3,743,554	-		Sama_3156	0.26	+1.7
3,743,554	-		Sama_3156	0.26	+0.4
3,743,564	+		Sama_3156	0.28	+1.1
3,743,565	-		Sama_3156	0.28	-1.9
3,743,565	-		Sama_3156	0.28	+1.3
3,743,573	+		Sama_3156	0.30	-0.3
3,743,593	-		Sama_3156	0.35	+2.3
3,743,593	-		Sama_3156	0.35	-2.0
3,743,593	-		Sama_3156	0.35	-2.3
3,743,626	+		Sama_3156	0.43	-1.7
3,743,626	+		Sama_3156	0.43	-2.7
3,743,626	+		Sama_3156	0.43	+0.2
3,743,626	+		Sama_3156	0.43	-0.7
3,743,626	+		Sama_3156	0.43	-2.7
3,743,626	+		Sama_3156	0.43	+0.5
3,743,626	+		Sama_3156	0.43	-2.4
3,743,626	+		Sama_3156	0.43	+3.5
3,743,626	+		Sama_3156	0.43	+2.5
3,743,626	+		Sama_3156	0.43	+1.1
3,743,626	+		Sama_3156	0.43	+0.7
3,743,626	+		Sama_3156	0.43	+1.1
3,743,627	-		Sama_3156	0.43	-0.4
3,743,628	+		Sama_3156	0.44	-1.2
3,743,628	+		Sama_3156	0.44	-1.0
3,743,628	+		Sama_3156	0.44	+0.0
3,743,628	+		Sama_3156	0.44	+2.5
3,743,673	+		Sama_3156	0.55	+4.4
3,743,673	+		Sama_3156	0.55	-0.6
3,743,673	+		Sama_3156	0.55	+0.4
3,743,815	+		Sama_3156	0.89	-0.6
3,743,815	+		Sama_3156	0.89	-2.5
3,743,815	+		Sama_3156	0.89	+3.5
3,743,815	+		Sama_3156	0.89	-2.3
3,743,815	+		Sama_3156	0.89	+1.4
3,743,815	+		Sama_3156	0.89	+0.2
3,743,815	+		Sama_3156	0.89	-1.9
3,743,815	+		Sama_3156	0.89	-0.8
3,743,815	+		Sama_3156	0.89	-0.8
3,743,815	+		Sama_3156	0.89	-2.4
3,743,816	-		Sama_3156	0.89	-0.6
3,743,816	-		Sama_3156	0.89	-0.6
3,743,816	-		Sama_3156	0.89	+0.6
3,743,816	-		Sama_3156	0.89	+1.3
3,743,816	-		Sama_3156	0.89	+4.1
3,743,816	-		Sama_3156	0.89	-0.3
3,743,864	-				-1.8
3,743,890	-				+0.2
3,743,890	-				+0.1
3,743,902	+				-0.6
3,743,902	+				+1.3
3,743,903	-				+2.8
3,743,963	+				-0.4
3,743,963	+				+0.2
3,744,005	+				-0.9
3,744,033	+				+0.9
3,744,033	+				-1.2
3,744,033	+				-1.0
3,744,034	-				-1.5
3,744,113	+		Sama_3157	0.18	+3.5
3,744,113	+		Sama_3157	0.18	+0.2
3,744,113	+		Sama_3157	0.18	-0.2
3,744,114	-		Sama_3157	0.18	+0.2
3,744,114	-		Sama_3157	0.18	+0.8
3,744,157	+		Sama_3157	0.23	-0.5
3,744,157	+		Sama_3157	0.23	+1.4
3,744,157	+		Sama_3157	0.23	-2.6
3,744,157	+		Sama_3157	0.23	+4.4
3,744,157	+		Sama_3157	0.23	-0.6
3,744,157	+		Sama_3157	0.23	-0.0
3,744,158	-		Sama_3157	0.23	-0.2
3,744,158	-		Sama_3157	0.23	+0.6
3,744,158	-		Sama_3157	0.23	+0.3
3,744,158	-		Sama_3157	0.23	+0.8
3,744,158	-		Sama_3157	0.23	+1.3
3,744,159	+		Sama_3157	0.23	+1.8
3,744,159	+		Sama_3157	0.23	-1.6
3,744,159	+		Sama_3157	0.23	-3.0
3,744,160	-		Sama_3157	0.24	+0.3
3,744,160	-		Sama_3157	0.24	-2.0
3,744,190	+		Sama_3157	0.27	-0.9
3,744,190	+		Sama_3157	0.27	-1.3
3,744,190	+		Sama_3157	0.27	-2.3
3,744,191	-		Sama_3157	0.27	-1.3
3,744,191	-		Sama_3157	0.27	-0.7
3,744,191	-		Sama_3157	0.27	+0.6
3,744,191	-		Sama_3157	0.27	-0.7
3,744,191	-		Sama_3157	0.27	-2.2
3,744,191	-		Sama_3157	0.27	+0.5
3,744,191	-		Sama_3157	0.27	+1.1
3,744,191	-		Sama_3157	0.27	+1.3
3,744,228	+		Sama_3157	0.32	-3.0
3,744,228	+		Sama_3157	0.32	-1.7
3,744,228	+		Sama_3157	0.32	+2.5
3,744,228	+		Sama_3157	0.32	-0.4
3,744,228	+		Sama_3157	0.32	-1.2
3,744,229	-		Sama_3157	0.32	-0.2
3,744,229	-		Sama_3157	0.32	-1.7
3,744,229	-		Sama_3157	0.32	-2.7
3,744,229	-		Sama_3157	0.32	+1.6
3,744,303	+		Sama_3157	0.41	+0.4
3,744,304	-		Sama_3157	0.42	+2.4
3,744,304	-		Sama_3157	0.42	+0.9
3,744,304	-		Sama_3157	0.42	+1.0
3,744,345	+		Sama_3157	0.47	-0.3
3,744,442	-		Sama_3157	0.59	-1.5
3,744,465	+		Sama_3157	0.62	+0.0
3,744,465	+		Sama_3157	0.62	+1.0
3,744,465	+		Sama_3157	0.62	-1.2
3,744,466	-		Sama_3157	0.62	-2.8
3,744,466	-		Sama_3157	0.62	-0.6
3,744,522	+		Sama_3157	0.69	+1.0
3,744,522	+		Sama_3157	0.69	+1.5
3,744,523	-		Sama_3157	0.69	+0.3
3,744,523	-		Sama_3157	0.69	+0.6
3,744,559	+		Sama_3157	0.73	-1.2
3,744,627	+		Sama_3157	0.82	+1.9
3,744,627	+		Sama_3157	0.82	-0.8
3,744,628	-		Sama_3157	0.82	-0.6
3,744,671	+		Sama_3157	0.87	-1.1
3,744,672	-		Sama_3157	0.88	+0.1
3,744,712	-				+4.0
3,744,748	+				-2.7
3,744,749	-				-1.3
3,744,769	+				-2.7
3,744,769	+				-1.3
3,744,839	+				+2.1
3,744,856	+				-1.0
3,744,857	-				+0.5
3,744,857	-				+2.2
3,744,875	+				-0.0
3,744,875	+				-1.3
3,744,875	+				-0.8
3,744,876	-				-1.2
3,744,876	-				+2.5
3,744,876	-				-2.3
3,744,893	+				-1.0
3,744,893	+				+2.4
3,744,893	+				+2.8
3,744,893	+				-2.2
3,744,894	-				+0.8
3,744,894	-				-2.2
3,744,894	-				-0.5
3,744,897	+				+3.0
3,744,897	+				+4.6
3,744,897	+				-0.7
3,744,897	+				+0.3
3,744,897	+				+0.5
3,744,897	+				+0.2
3,744,897	+				-1.3
3,744,897	+				-0.5
3,744,897	+				+0.4
3,744,897	+				-1.7
3,744,897	+				-1.0
3,744,897	+				-1.1
3,744,897	+				-0.0
3,744,897	+				+2.0
3,744,897	+				-1.5
3,744,898	-				+1.7
3,744,898	-				+1.0
3,744,898	-				-2.0
3,744,898	-				+0.7
3,744,898	-				-0.3
3,744,898	-				-2.0
3,744,902	+				-1.8
3,744,902	+				+0.9
3,744,902	+				+1.3
3,744,903	-				-0.9
3,744,903	-				+2.0
3,744,903	-				-0.1
3,744,903	-				+1.3
3,744,903	-				-0.3
3,744,903	-				-0.0
3,744,903	-				-1.1
3,744,921	-				+0.5
3,745,036	+		Sama_3158	0.49	-1.2
3,745,036	+		Sama_3158	0.49	-1.3
3,745,036	+		Sama_3158	0.49	+1.4
3,745,036	+		Sama_3158	0.49	+1.1
3,745,037	-		Sama_3158	0.49	-1.0
3,745,037	-		Sama_3158	0.49	-0.2
3,745,168	+				-0.2
3,745,168	+				+1.9
3,745,168	+				+0.3
3,745,168	+				-0.4
3,745,168	+				-2.0
3,745,168	+				+2.1
3,745,169	-				-0.6
3,745,173	+				+0.3
3,745,173	+				-0.3
3,745,173	+				+0.5
3,745,173	+				+0.1
3,745,173	+				-2.2
3,745,174	-				-0.3
3,745,174	-				-0.5
3,745,236	+				+1.0
3,745,236	+				+0.2
3,745,236	+				+2.2
3,745,236	+				+0.5
3,745,236	+				-3.4
3,745,236	+				+0.9
3,745,236	+				-1.0
3,745,236	+				-0.5
3,745,236	+				+1.7
3,745,236	+				-1.5
3,745,236	+				+2.1
3,745,236	+				-1.2
3,745,236	+				-1.1
3,745,236	+				-2.1
3,745,236	+				+1.3
3,745,236	+				-1.5
3,745,237	-				+0.7
3,745,237	-				-0.8
3,745,237	-				+2.4
3,745,237	-				+0.2
3,745,237	-				+1.0
3,745,237	-				-2.6
3,745,237	-				+1.1
3,745,237	-				-2.4
3,745,237	-				-1.6
3,745,237	-				+1.0
3,745,237	-				+1.8
3,745,237	-				+1.2
3,745,237	-				+2.4
3,745,237	-				+0.2
3,745,237	-				+2.1
3,745,237	-				-1.5
3,745,237	-				-2.8
3,745,343	+				-0.0
3,745,343	+				+0.9
3,745,343	+				+1.1
3,745,344	-				-1.7
3,745,344	-				-1.5
3,745,348	-				+0.1
3,745,360	+				-2.2
3,745,361	-				-1.1
3,745,361	-				-0.1
3,745,361	-				+0.3
3,745,361	-				+0.8
3,745,366	+				-0.9
3,745,366	+				-1.0
3,745,366	+				-0.1
3,745,366	+				-0.8
3,745,366	+				-1.8
3,745,367	-				-0.3
3,745,367	-				-1.1
3,745,367	-				-2.5
3,745,367	-				-0.0
3,745,367	-				-0.6
3,745,367	-				+0.2
3,745,367	-				-0.4
3,745,375	+				-3.2
3,745,375	+				+2.9
3,745,375	+				-0.5
3,745,375	+				+0.1
3,745,375	+				+1.9
3,745,375	+				+0.7
3,745,376	-				+1.1
3,745,376	-				-2.5
3,745,376	-				+2.0
3,745,376	-				-0.8
3,745,392	+				-0.6
3,745,392	+				+0.6
3,745,393	-				-1.1
3,745,393	-				-1.4
3,745,393	-				-1.5
3,745,406	+				-0.5
3,745,406	+				-0.8
3,745,407	-				-0.5
3,745,407	-				-0.2
3,745,476	+		Sama_3159	0.12	-0.2
3,745,476	+		Sama_3159	0.12	-0.9
3,745,477	-		Sama_3159	0.12	-0.8
3,745,491	+		Sama_3159	0.14	-0.6
3,745,492	-		Sama_3159	0.14	+2.7
3,745,495	+		Sama_3159	0.14	-0.5
3,745,495	+		Sama_3159	0.14	+0.4
3,745,495	+		Sama_3159	0.14	-1.5
3,745,495	+		Sama_3159	0.14	-0.5
3,745,496	-		Sama_3159	0.14	-0.7
3,745,496	-		Sama_3159	0.14	+0.2
3,745,496	-		Sama_3159	0.14	+0.0
3,745,496	-		Sama_3159	0.14	-0.2
3,745,530	+		Sama_3159	0.19	+3.0
3,745,530	+		Sama_3159	0.19	+1.7
3,745,530	+		Sama_3159	0.19	-1.2
3,745,530	+		Sama_3159	0.19	-1.0
3,745,530	+		Sama_3159	0.19	+0.4
3,745,530	+		Sama_3159	0.19	-1.0
3,745,531	-		Sama_3159	0.20	-2.6
3,745,556	-		Sama_3159	0.23	-1.6
3,745,620	+		Sama_3159	0.32	+0.1
3,745,620	+		Sama_3159	0.32	-2.0
3,745,620	+		Sama_3159	0.32	-1.0
3,745,620	+		Sama_3159	0.32	-2.5
3,745,620	+		Sama_3159	0.32	-1.0
3,745,620	+		Sama_3159	0.32	-0.0
3,745,620	+		Sama_3159	0.32	+5.2
3,745,620	+		Sama_3159	0.32	-2.0
3,745,620	+		Sama_3159	0.32	+0.5
3,745,621	-		Sama_3159	0.33	+0.3
3,745,621	-		Sama_3159	0.33	+0.4
3,745,621	-		Sama_3159	0.33	+1.2
3,745,621	-		Sama_3159	0.33	+1.6
3,745,621	-		Sama_3159	0.33	+0.5
3,745,640	-		Sama_3159	0.35	-1.0
3,745,648	+		Sama_3159	0.37	+2.2
3,745,648	+		Sama_3159	0.37	-2.5
3,745,649	-		Sama_3159	0.37	+1.6
3,745,649	-		Sama_3159	0.37	+3.2
3,745,650	+		Sama_3159	0.37	+2.5
3,745,651	-		Sama_3159	0.37	-1.2
3,745,651	-		Sama_3159	0.37	-0.5
3,745,659	+		Sama_3159	0.38	-1.0
3,745,659	+		Sama_3159	0.38	+1.7
3,745,690	+		Sama_3159	0.43	-0.3
3,745,691	-		Sama_3159	0.43	-0.8
3,745,691	-		Sama_3159	0.43	+1.0
3,745,696	+		Sama_3159	0.43	-2.0
3,745,696	+		Sama_3159	0.43	-2.1
3,745,697	-		Sama_3159	0.44	-0.4
3,745,697	-		Sama_3159	0.44	-1.1
3,745,699	+		Sama_3159	0.44	+1.5
3,745,699	+		Sama_3159	0.44	-0.2
3,745,699	+		Sama_3159	0.44	-0.3
3,745,699	+		Sama_3159	0.44	+0.1
3,745,699	+		Sama_3159	0.44	+2.5
3,745,699	+		Sama_3159	0.44	+0.4
3,745,699	+		Sama_3159	0.44	+0.1
3,745,699	+		Sama_3159	0.44	+1.1
3,745,699	+		Sama_3159	0.44	-2.0
3,745,700	-		Sama_3159	0.44	+1.9
3,745,700	-		Sama_3159	0.44	-2.8
3,745,700	-		Sama_3159	0.44	-2.2
3,745,700	-		Sama_3159	0.44	-0.6
3,745,700	-		Sama_3159	0.44	-2.1
3,745,700	-		Sama_3159	0.44	+0.6
3,745,700	-		Sama_3159	0.44	+3.7
3,745,744	+		Sama_3159	0.50	+0.3
3,745,744	+		Sama_3159	0.50	+1.6
3,745,744	+		Sama_3159	0.50	-0.0
3,745,744	+		Sama_3159	0.50	+1.0
3,745,744	+		Sama_3159	0.50	-2.2
3,745,744	+		Sama_3159	0.50	-1.9
3,745,744	+		Sama_3159	0.50	-0.6
3,745,745	-		Sama_3159	0.51	+0.0