Strain Fitness in Shewanella amazonensis SB2B around Sama_3015

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,589,361	+		Sama_3014	0.65	-0.9
3,589,361	+		Sama_3014	0.65	-0.6
3,589,361	+		Sama_3014	0.65	-2.3
3,589,362	-		Sama_3014	0.65	-0.5
3,589,362	-		Sama_3014	0.65	-1.2
3,589,362	-		Sama_3014	0.65	-2.1
3,589,397	+		Sama_3014	0.66	+1.6
3,589,398	-		Sama_3014	0.67	+0.5
3,589,398	-		Sama_3014	0.67	-1.9
3,589,398	-		Sama_3014	0.67	+0.9
3,589,398	-		Sama_3014	0.67	-0.6
3,589,404	+		Sama_3014	0.67	-2.4
3,589,404	+		Sama_3014	0.67	+1.2
3,589,405	-		Sama_3014	0.67	-1.3
3,589,405	-		Sama_3014	0.67	+0.2
3,589,427	+		Sama_3014	0.68	-2.9
3,589,427	+		Sama_3014	0.68	+1.2
3,589,427	+		Sama_3014	0.68	+1.5
3,589,428	-		Sama_3014	0.68	+3.6
3,589,428	-		Sama_3014	0.68	-2.7
3,589,428	-		Sama_3014	0.68	+1.2
3,589,428	-		Sama_3014	0.68	-3.2
3,589,428	-		Sama_3014	0.68	-3.0
3,589,428	-		Sama_3014	0.68	+1.1
3,589,428	-		Sama_3014	0.68	+4.3
3,589,481	+		Sama_3014	0.70	+0.8
3,589,481	+		Sama_3014	0.70	-0.5
3,589,481	+		Sama_3014	0.70	+1.3
3,589,481	+		Sama_3014	0.70	+0.0
3,589,481	+		Sama_3014	0.70	-0.3
3,589,482	-		Sama_3014	0.70	-1.6
3,589,482	-		Sama_3014	0.70	-1.3
3,589,482	-		Sama_3014	0.70	-0.4
3,589,506	+		Sama_3014	0.71	-0.7
3,589,530	+		Sama_3014	0.72	-0.5
3,589,531	-		Sama_3014	0.72	-0.3
3,589,532	+		Sama_3014	0.72	-0.8
3,589,532	+		Sama_3014	0.72	+1.6
3,589,532	+		Sama_3014	0.72	+0.8
3,589,574	+		Sama_3014	0.74	+2.5
3,589,574	+		Sama_3014	0.74	-1.7
3,589,574	+		Sama_3014	0.74	+2.4
3,589,575	-		Sama_3014	0.74	+1.0
3,589,575	-		Sama_3014	0.74	+1.9
3,589,575	-		Sama_3014	0.74	+2.9
3,589,575	-		Sama_3014	0.74	-0.9
3,589,575	-		Sama_3014	0.74	+1.1
3,589,575	-		Sama_3014	0.74	-0.6
3,589,575	-		Sama_3014	0.74	+1.3
3,589,599	+		Sama_3014	0.75	+4.7
3,589,607	+		Sama_3014	0.75	+0.5
3,589,607	+		Sama_3014	0.75	-2.7
3,589,607	+		Sama_3014	0.75	+1.0
3,589,607	+		Sama_3014	0.75	-3.2
3,589,608	-		Sama_3014	0.75	+0.1
3,589,608	-		Sama_3014	0.75	-0.5
3,589,669	+		Sama_3014	0.77	+0.3
3,589,669	+		Sama_3014	0.77	-0.8
3,589,669	+		Sama_3014	0.77	-0.5
3,589,669	+		Sama_3014	0.77	+0.5
3,589,669	+		Sama_3014	0.77	+0.6
3,589,670	-		Sama_3014	0.77	+0.7
3,589,697	-		Sama_3014	0.79	-3.3
3,589,762	-		Sama_3014	0.81	+2.0
3,589,826	+		Sama_3014	0.84	+1.3
3,589,826	+		Sama_3014	0.84	-2.4
3,589,826	+		Sama_3014	0.84	+4.9
3,589,826	+		Sama_3014	0.84	-2.9
3,589,826	+		Sama_3014	0.84	-0.9
3,589,827	-		Sama_3014	0.84	+0.4
3,589,827	-		Sama_3014	0.84	-2.4
3,589,827	-		Sama_3014	0.84	+2.0
3,589,827	-		Sama_3014	0.84	-0.5
3,589,827	-		Sama_3014	0.84	+1.0
3,589,827	-		Sama_3014	0.84	-3.8
3,589,832	+		Sama_3014	0.84	+1.3
3,589,832	+		Sama_3014	0.84	-1.9
3,589,833	-		Sama_3014	0.84	+1.0
3,589,833	-		Sama_3014	0.84	+0.8
3,589,833	-		Sama_3014	0.84	-1.8
3,589,833	-		Sama_3014	0.84	-2.7
3,589,833	-		Sama_3014	0.84	-0.4
3,589,833	-		Sama_3014	0.84	+1.9
3,589,833	-		Sama_3014	0.84	+3.0
3,589,833	-		Sama_3014	0.84	+1.1
3,589,833	-		Sama_3014	0.84	+2.6
3,589,854	+		Sama_3014	0.85	-0.4
3,589,888	+		Sama_3014	0.86	+2.1
3,589,888	+		Sama_3014	0.86	+0.1
3,589,888	+		Sama_3014	0.86	+0.2
3,589,888	+		Sama_3014	0.86	-1.1
3,589,888	+		Sama_3014	0.86	-1.4
3,589,889	-		Sama_3014	0.86	-1.4
3,589,889	-		Sama_3014	0.86	-0.1
3,589,889	-		Sama_3014	0.86	+3.7
3,589,937	+		Sama_3014	0.88	-1.8
3,589,937	+		Sama_3014	0.88	+0.0
3,589,937	+		Sama_3014	0.88	+1.7
3,589,937	+		Sama_3014	0.88	-1.7
3,589,937	+		Sama_3014	0.88	-2.1
3,589,937	+		Sama_3014	0.88	-0.5
3,589,937	+		Sama_3014	0.88	-1.0
3,589,938	-		Sama_3014	0.88	+0.0
3,589,938	-		Sama_3014	0.88	+0.2
3,589,938	-		Sama_3014	0.88	+1.0
3,589,938	-		Sama_3014	0.88	-2.5
3,589,938	-		Sama_3014	0.88	+1.3
3,589,940	+		Sama_3014	0.88	+2.1
3,589,940	+		Sama_3014	0.88	+0.5
3,589,940	+		Sama_3014	0.88	+0.2
3,589,941	-		Sama_3014	0.88	-3.1
3,589,941	-		Sama_3014	0.88	+0.5
3,589,941	-		Sama_3014	0.88	+0.7
3,589,941	-		Sama_3014	0.88	-3.8
3,589,947	+		Sama_3014	0.89	+1.1
3,589,947	+		Sama_3014	0.89	-1.2
3,589,948	-		Sama_3014	0.89	-1.0
3,590,277	+				+0.5
3,590,277	+				-0.8
3,590,277	+				-1.1
3,590,277	+				+1.8
3,590,277	+				-0.7
3,590,278	-				-1.2
3,590,279	+				-1.0
3,590,279	+				-0.6
3,590,279	+				-2.0
3,590,279	+				+1.2
3,590,279	+				+1.0
3,590,279	+				-1.0
3,590,279	+				-1.7
3,590,279	+				+0.2
3,590,280	-				-0.6
3,590,280	-				+3.0
3,590,280	-				-2.8
3,590,280	-				-1.0
3,590,280	-				-0.7
3,590,284	+				+2.0
3,590,284	+				-1.7
3,590,284	+				-1.4
3,590,285	-				+0.6
3,590,285	-				+1.5
3,590,285	-				+3.1
3,590,285	-				-1.9
3,590,285	-				+4.1
3,590,285	-				+0.1
3,590,285	-				-0.7
3,590,320	+				-1.0
3,590,320	+				-1.0
3,590,320	+				-1.4
3,590,336	+				-1.3
3,590,441	+		Sama_3015	0.13	-0.4
3,590,441	+		Sama_3015	0.13	-0.7
3,590,457	+		Sama_3015	0.15	-0.1
3,590,458	-		Sama_3015	0.15	+0.8
3,590,458	-		Sama_3015	0.15	+0.0
3,590,458	-		Sama_3015	0.15	-1.5
3,590,458	-		Sama_3015	0.15	-1.9
3,590,661	+		Sama_3015	0.46	+1.0
3,590,671	+		Sama_3015	0.48	+0.5
3,590,671	+		Sama_3015	0.48	-1.5
3,590,672	-		Sama_3015	0.48	+1.1
3,590,672	-		Sama_3015	0.48	-0.5
3,590,721	+		Sama_3015	0.56	+1.9
3,590,722	-		Sama_3015	0.56	-3.0
3,590,798	+		Sama_3015	0.67	+0.8
3,590,798	+		Sama_3015	0.67	-1.2
3,590,798	+		Sama_3015	0.67	-2.6
3,590,798	+		Sama_3015	0.67	-2.6
3,590,799	-		Sama_3015	0.68	+1.5
3,590,799	-		Sama_3015	0.68	-0.7
3,590,799	-		Sama_3015	0.68	+0.2
3,590,799	-		Sama_3015	0.68	-0.5
3,590,832	+		Sama_3015	0.73	+1.5
3,590,832	+		Sama_3015	0.73	+3.0
3,590,832	+		Sama_3015	0.73	+2.0
3,590,832	+		Sama_3015	0.73	-1.2
3,590,832	+		Sama_3015	0.73	+0.2
3,590,833	-		Sama_3015	0.73	+0.5
3,590,833	-		Sama_3015	0.73	-0.8
3,590,835	+		Sama_3015	0.73	+0.3
3,590,835	+		Sama_3015	0.73	-1.5
3,590,836	-		Sama_3015	0.73	+1.5
3,590,836	-		Sama_3015	0.73	-1.0
3,590,882	+		Sama_3015	0.80	+0.3
3,590,883	-		Sama_3015	0.80	-1.4
3,590,883	-		Sama_3015	0.80	-0.7
3,590,883	-		Sama_3015	0.80	+1.4
3,590,895	+		Sama_3015	0.82	-1.5
3,590,901	+		Sama_3015	0.83	-0.3
3,590,901	+		Sama_3015	0.83	-0.8
3,590,902	-		Sama_3015	0.83	-0.3
3,590,902	-		Sama_3015	0.83	-0.8
3,590,912	+		Sama_3015	0.85	+0.3
3,590,912	+		Sama_3015	0.85	-1.6
3,590,912	+		Sama_3015	0.85	-2.4
3,590,912	+		Sama_3015	0.85	-0.4
3,590,912	+		Sama_3015	0.85	-1.5
3,590,912	+		Sama_3015	0.85	+0.7
3,590,912	+		Sama_3015	0.85	-1.5
3,590,912	+		Sama_3015	0.85	-2.3
3,590,912	+		Sama_3015	0.85	+0.5
3,590,912	+		Sama_3015	0.85	-2.0
3,590,912	+		Sama_3015	0.85	+0.7
3,590,913	-		Sama_3015	0.85	+0.4
3,590,913	-		Sama_3015	0.85	-1.1
3,590,913	-		Sama_3015	0.85	-2.2
3,590,920	+		Sama_3015	0.86	+0.5
3,590,920	+		Sama_3015	0.86	-0.5
3,590,920	+		Sama_3015	0.86	+0.0
3,590,921	-		Sama_3015	0.86	-0.7
3,590,941	-		Sama_3015	0.89	-1.0
3,590,941	-		Sama_3015	0.89	+1.4
3,591,024	+				+1.8
3,591,024	+				-1.0
3,591,024	+				-1.2
3,591,024	+				-1.2
3,591,024	+				-1.0
3,591,024	+				-0.8
3,591,024	+				-1.1
3,591,024	+				-0.1
3,591,024	+				-1.0
3,591,024	+				-2.4
3,591,024	+				-1.2
3,591,024	+				-0.5
3,591,024	+				+2.5
3,591,024	+				-0.1
3,591,024	+				+1.1
3,591,024	+				+0.8
3,591,024	+				-1.9
3,591,024	+				-0.9
3,591,025	-				+2.3
3,591,025	-				-2.3
3,591,025	-				-1.5
3,591,025	-				-0.8
3,591,025	-				+1.0
3,591,025	-				+0.4
3,591,025	-				+0.6
3,591,025	-				-0.6
3,591,025	-				-0.7
3,591,025	-				-0.2
3,591,025	-				+1.1
3,591,025	-				-2.0
3,591,025	-				+2.4
3,591,025	-				-0.6
3,591,031	-				-0.5
3,591,037	-				-2.8
3,591,037	-				-1.2
3,591,037	-				+1.5
3,591,065	-				-2.4
3,591,071	+				+2.1
3,591,071	+				-0.2
3,591,072	-				-2.1
3,591,072	-				+1.0
3,591,102	+				+0.9
3,591,102	+				+2.3
3,591,103	-				-2.8
3,591,118	+				-0.9
3,591,118	+				+3.2
3,591,118	+				-2.2
3,591,119	-				+0.1
3,591,167	+		Sama_3016	0.11	+1.4
3,591,167	+		Sama_3016	0.11	-0.1
3,591,179	+		Sama_3016	0.12	-1.6
3,591,179	+		Sama_3016	0.12	-1.6
3,591,196	+		Sama_3016	0.13	-0.5
3,591,197	-		Sama_3016	0.13	-1.0
3,591,197	-		Sama_3016	0.13	-1.5
3,591,197	-		Sama_3016	0.13	+0.4
3,591,206	+		Sama_3016	0.14	+1.0
3,591,246	+		Sama_3016	0.18	-0.8
3,591,246	+		Sama_3016	0.18	-1.9
3,591,246	+		Sama_3016	0.18	+2.2
3,591,246	+		Sama_3016	0.18	-0.1
3,591,246	+		Sama_3016	0.18	+2.2
3,591,247	-		Sama_3016	0.18	+2.6
3,591,247	-		Sama_3016	0.18	+0.6
3,591,247	-		Sama_3016	0.18	-2.5
3,591,247	-		Sama_3016	0.18	-0.7
3,591,247	-		Sama_3016	0.18	+2.3
3,591,274	+		Sama_3016	0.20	-1.0
3,591,275	-		Sama_3016	0.20	-1.2
3,591,280	+		Sama_3016	0.21	-1.3
3,591,280	+		Sama_3016	0.21	-0.7
3,591,281	-		Sama_3016	0.21	-0.7
3,591,377	+		Sama_3016	0.29	-2.7
3,591,377	+		Sama_3016	0.29	-0.0
3,591,378	-		Sama_3016	0.29	-1.0
3,591,378	-		Sama_3016	0.29	-1.2
3,591,411	+		Sama_3016	0.32	-2.5
3,591,412	-		Sama_3016	0.32	-0.4
3,591,415	-		Sama_3016	0.32	+1.9
3,591,415	-		Sama_3016	0.32	+1.5
3,591,447	+		Sama_3016	0.35	-1.7
3,591,447	+		Sama_3016	0.35	+3.3
3,591,448	-		Sama_3016	0.35	-0.8
3,591,448	-		Sama_3016	0.35	-0.0
3,591,478	+		Sama_3016	0.38	+0.0
3,591,479	-		Sama_3016	0.38	-1.8
3,591,479	-		Sama_3016	0.38	-2.3
3,591,479	-		Sama_3016	0.38	-1.1
3,591,494	+		Sama_3016	0.39	+2.2
3,591,495	-		Sama_3016	0.39	+0.8
3,591,495	-		Sama_3016	0.39	-0.5
3,591,505	+		Sama_3016	0.40	+1.0
3,591,513	+		Sama_3016	0.41	+1.1
3,591,525	+		Sama_3016	0.42	-1.5
3,591,525	+		Sama_3016	0.42	+0.4
3,591,525	+		Sama_3016	0.42	+1.8
3,591,525	+		Sama_3016	0.42	-4.1
3,591,526	-		Sama_3016	0.42	-0.1
3,591,526	-		Sama_3016	0.42	-0.5
3,591,526	-		Sama_3016	0.42	-1.7
3,591,526	-		Sama_3016	0.42	-0.7
3,591,589	+		Sama_3016	0.47	-0.6
3,591,590	-		Sama_3016	0.47	-0.0
3,591,590	-		Sama_3016	0.47	-0.6
3,591,592	+		Sama_3016	0.47	-1.8
3,591,592	+		Sama_3016	0.47	-2.2
3,591,592	+		Sama_3016	0.47	+0.9
3,591,592	+		Sama_3016	0.47	-0.3
3,591,593	-		Sama_3016	0.48	+2.4
3,591,593	-		Sama_3016	0.48	-1.7
3,591,593	-		Sama_3016	0.48	+3.0
3,591,619	+		Sama_3016	0.50	-2.7
3,591,619	+		Sama_3016	0.50	-1.7
3,591,646	-		Sama_3016	0.52	-2.2
3,591,648	+		Sama_3016	0.52	+0.9
3,591,690	-		Sama_3016	0.56	-1.0
3,591,810	-		Sama_3016	0.66	+1.5
3,591,810	-		Sama_3016	0.66	-0.0
3,591,869	+		Sama_3016	0.71	-1.7
3,591,926	+		Sama_3016	0.76	+0.8
3,591,926	+		Sama_3016	0.76	+0.3
3,591,926	+		Sama_3016	0.76	+1.0
3,591,926	+		Sama_3016	0.76	+2.4
3,591,927	-		Sama_3016	0.76	-2.4