Strain Fitness in Shewanella amazonensis SB2B around Sama_2889

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,429,303	-				+2.4
3,429,344	+				-1.6
3,429,344	+				+1.0
3,429,344	+				+1.2
3,429,344	+				-2.9
3,429,344	+				+2.4
3,429,345	-				+0.4
3,429,400	+				-1.9
3,429,400	+				-0.8
3,429,401	-				+0.7
3,429,401	-				-0.0
3,429,572	-				+0.2
3,429,572	-				+1.8
3,429,580	+				+0.5
3,429,606	-				-1.8
3,429,606	-				+0.1
3,429,629	+				-0.3
3,429,630	-				+0.4
3,429,630	-				-1.3
3,429,630	-				+0.7
3,429,656	+				-1.9
3,429,656	+				-2.0
3,429,657	-				-0.7
3,429,689	+				-1.7
3,429,689	+				-1.3
3,429,689	+				-2.5
3,429,689	+				-1.2
3,429,690	-				-1.1
3,429,690	-				-3.2
3,429,690	-				-2.3
3,429,690	-				-3.1
3,429,690	-				-2.1
3,429,690	-				-1.2
3,429,690	-				-1.0
3,429,690	-				-2.3
3,429,690	-				-1.5
3,429,690	-				-2.9
3,429,690	-				-2.9
3,429,691	+				-2.2
3,429,691	+				-2.2
3,429,691	+				-1.2
3,429,692	-				-0.5
3,429,692	-				-1.5
3,429,692	-				-2.5
3,429,692	-				-4.6
3,429,692	-				-2.5
3,429,702	-				-2.0
3,429,906	-		Sama_2888	0.38	-3.0
3,429,906	-		Sama_2888	0.38	-2.0
3,430,108	+		Sama_2888	0.72	+0.2
3,430,109	-		Sama_2888	0.72	-1.6
3,430,352	+				-2.0
3,430,352	+				-2.6
3,430,385	+				-2.8
3,430,385	+				-3.5
3,430,385	+				-2.7
3,430,385	+				-3.2
3,430,386	-				-2.4
3,430,386	-				-1.5
3,430,386	-				-2.7
3,430,386	-				-3.0
3,430,386	-				-3.0
3,430,401	-				-3.5
3,430,437	-				-0.7
3,430,452	+				-3.5
3,430,504	+		Sama_2889	0.12	-3.5
3,430,504	+		Sama_2889	0.12	-1.5
3,430,583	-		Sama_2889	0.16	-1.3
3,430,601	+		Sama_2889	0.17	-0.8
3,430,601	+		Sama_2889	0.17	-2.2
3,430,601	+		Sama_2889	0.17	-2.7
3,430,601	+		Sama_2889	0.17	-2.7
3,430,602	-		Sama_2889	0.17	-1.6
3,430,603	+		Sama_2889	0.17	-1.9
3,430,604	-		Sama_2889	0.18	-2.1
3,430,625	+		Sama_2889	0.19	-2.7
3,430,626	-		Sama_2889	0.19	-2.9
3,430,626	-		Sama_2889	0.19	-3.9
3,430,626	-		Sama_2889	0.19	-2.2
3,430,626	-		Sama_2889	0.19	-1.7
3,430,630	+		Sama_2889	0.19	-0.7
3,430,630	+		Sama_2889	0.19	-1.9
3,430,630	+		Sama_2889	0.19	+0.5
3,430,630	+		Sama_2889	0.19	-2.5
3,430,631	-		Sama_2889	0.19	-4.3
3,430,631	-		Sama_2889	0.19	-2.6
3,430,631	-		Sama_2889	0.19	-3.3
3,430,732	+		Sama_2889	0.25	-2.8
3,430,732	+		Sama_2889	0.25	-0.9
3,430,732	+		Sama_2889	0.25	-2.7
3,430,733	-		Sama_2889	0.25	-2.1
3,430,733	-		Sama_2889	0.25	-3.0
3,430,733	-		Sama_2889	0.25	-0.5
3,430,755	+		Sama_2889	0.26	-2.9
3,430,755	+		Sama_2889	0.26	-3.8
3,430,756	-		Sama_2889	0.26	-1.9
3,430,819	+		Sama_2889	0.30	-1.7
3,430,820	-		Sama_2889	0.30	-4.4
3,430,853	-		Sama_2889	0.32	-1.5
3,431,011	+		Sama_2889	0.41	-3.2
3,431,012	-		Sama_2889	0.41	-2.1
3,431,072	-		Sama_2889	0.44	-2.3
3,431,072	-		Sama_2889	0.44	-2.4
3,431,113	+		Sama_2889	0.47	-3.5
3,431,113	+		Sama_2889	0.47	-2.0
3,431,113	+		Sama_2889	0.47	-1.7
3,431,114	-		Sama_2889	0.47	-2.7
3,431,114	-		Sama_2889	0.47	-2.9
3,431,114	-		Sama_2889	0.47	-1.7
3,431,114	-		Sama_2889	0.47	-2.5
3,431,186	+		Sama_2889	0.51	-1.6
3,431,187	-		Sama_2889	0.51	-2.7
3,431,187	-		Sama_2889	0.51	-2.7
3,431,232	+		Sama_2889	0.53	-1.4
3,431,233	-		Sama_2889	0.53	-3.8
3,431,292	+		Sama_2889	0.57	-1.8
3,431,293	-		Sama_2889	0.57	-1.2
3,431,293	-		Sama_2889	0.57	-3.1
3,431,295	+		Sama_2889	0.57	-1.9
3,431,295	+		Sama_2889	0.57	-2.1
3,431,296	-		Sama_2889	0.57	-2.2
3,431,340	-		Sama_2889	0.60	-2.2
3,431,395	-		Sama_2889	0.63	-1.9
3,431,410	-		Sama_2889	0.64	-2.4
3,431,410	-		Sama_2889	0.64	-2.2
3,431,427	-		Sama_2889	0.64	-1.9
3,431,518	+		Sama_2889	0.70	-1.8
3,431,518	+		Sama_2889	0.70	-2.7
3,431,518	+		Sama_2889	0.70	-2.1
3,431,518	+		Sama_2889	0.70	-1.2
3,431,519	-		Sama_2889	0.70	-4.0
3,431,519	-		Sama_2889	0.70	-2.9
3,431,519	-		Sama_2889	0.70	-1.2
3,431,519	-		Sama_2889	0.70	-0.7
3,431,519	-		Sama_2889	0.70	-2.9
3,431,519	-		Sama_2889	0.70	-3.8
3,431,519	-		Sama_2889	0.70	-2.3
3,431,519	-		Sama_2889	0.70	-1.3
3,431,519	-		Sama_2889	0.70	-1.6
3,431,538	+		Sama_2889	0.71	-1.8
3,431,604	+		Sama_2889	0.75	-0.9
3,431,605	-		Sama_2889	0.75	-0.6
3,431,676	-		Sama_2889	0.79	-3.8
3,431,754	+		Sama_2889	0.83	-2.1
3,431,754	+		Sama_2889	0.83	+0.2
3,431,773	-		Sama_2889	0.84	-1.9
3,431,773	-		Sama_2889	0.84	-1.7
3,431,800	+		Sama_2889	0.86	-2.0
3,431,801	-		Sama_2889	0.86	-3.5
3,431,801	-		Sama_2889	0.86	-2.3
3,431,824	-		Sama_2889	0.87	-1.6
3,431,936	+				-1.8
3,431,937	-				-1.2
3,431,942	-				-1.2
3,432,013	+				-2.0
3,432,014	-				-3.3
3,432,022	+				-2.2
3,432,022	+				-1.4
3,432,023	-				-1.5
3,432,023	-				-3.8
3,432,023	-				-2.3
3,432,025	+				-3.3
3,432,026	-				-1.8
3,432,032	+				-1.1
3,432,032	+				-2.8
3,432,033	-				-3.0
3,432,054	+				-3.2
3,432,063	-				+1.1
3,432,097	+				-1.9
3,432,098	-				-4.0
3,432,098	-				+0.5
3,432,098	-				-0.8
3,432,098	-				+0.1
3,432,124	+				-1.7
3,432,124	+				-1.1
3,432,269	-		Sama_2890	0.11	-3.2
3,432,269	-		Sama_2890	0.11	-2.0
3,432,284	-		Sama_2890	0.12	+0.4
3,432,413	+		Sama_2890	0.21	-1.7
3,432,413	+		Sama_2890	0.21	-2.0
3,432,413	+		Sama_2890	0.21	-2.3
3,432,414	-		Sama_2890	0.21	-1.2
3,432,414	-		Sama_2890	0.21	-0.5
3,432,458	-		Sama_2890	0.24	-4.2
3,432,474	+		Sama_2890	0.25	-2.3
3,432,475	-		Sama_2890	0.25	-1.4
3,432,475	-		Sama_2890	0.25	-2.3
3,432,475	-		Sama_2890	0.25	-1.6
3,432,567	-		Sama_2890	0.32	-0.1
3,432,670	+		Sama_2890	0.39	+0.2
3,432,671	-		Sama_2890	0.39	-3.9
3,432,671	-		Sama_2890	0.39	-1.5
3,432,783	+		Sama_2890	0.47	-2.7
3,432,784	-		Sama_2890	0.47	-1.4
3,432,784	-		Sama_2890	0.47	-0.7
3,432,784	-		Sama_2890	0.47	+0.2
3,432,870	+		Sama_2890	0.53	-1.0
3,432,871	-		Sama_2890	0.54	-0.8
3,432,952	+		Sama_2890	0.59	-1.2
3,432,952	+		Sama_2890	0.59	-2.5
3,432,953	-		Sama_2890	0.59	-1.1
3,432,953	-		Sama_2890	0.59	-3.1
3,432,975	+		Sama_2890	0.61	-2.5
3,432,976	-		Sama_2890	0.61	-0.5
3,432,976	-		Sama_2890	0.61	+0.0