Strain Fitness in Shewanella amazonensis SB2B around Sama_2883

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,422,674	+		Sama_2881	0.68	-0.1
3,422,675	-		Sama_2881	0.68	-1.5
3,422,675	-		Sama_2881	0.68	+1.0
3,422,675	-		Sama_2881	0.68	-1.1
3,422,675	-		Sama_2881	0.68	-1.4
3,422,675	-		Sama_2881	0.68	+0.2
3,422,757	+		Sama_2881	0.83	+2.6
3,422,757	+		Sama_2881	0.83	+1.8
3,422,757	+		Sama_2881	0.83	+0.8
3,422,757	+		Sama_2881	0.83	-2.0
3,422,757	+		Sama_2881	0.83	-1.4
3,422,757	+		Sama_2881	0.83	+2.3
3,422,757	+		Sama_2881	0.83	-1.3
3,422,758	-		Sama_2881	0.83	-0.5
3,422,758	-		Sama_2881	0.83	+1.8
3,422,758	-		Sama_2881	0.83	+0.6
3,422,758	-		Sama_2881	0.83	-0.3
3,422,758	-		Sama_2881	0.83	-1.5
3,422,758	-		Sama_2881	0.83	-0.9
3,422,761	-		Sama_2881	0.84	-1.9
3,422,761	-		Sama_2881	0.84	+1.2
3,422,825	+				+1.2
3,422,826	-				+0.2
3,422,826	-				+0.2
3,422,870	+				-1.0
3,422,870	+				+1.2
3,422,870	+				+0.5
3,422,870	+				-3.5
3,422,870	+				-2.3
3,422,871	-				-1.1
3,422,871	-				-1.6
3,422,871	-				-1.0
3,422,959	+		Sama_2882	0.22	-0.4
3,422,960	-		Sama_2882	0.22	-1.3
3,422,960	-		Sama_2882	0.22	-0.3
3,422,960	-		Sama_2882	0.22	+2.7
3,422,971	+		Sama_2882	0.24	-0.7
3,422,971	+		Sama_2882	0.24	-1.3
3,422,977	+		Sama_2882	0.25	+2.3
3,422,992	-		Sama_2882	0.28	-0.2
3,422,992	-		Sama_2882	0.28	-0.7
3,422,992	-		Sama_2882	0.28	-2.4
3,423,001	-		Sama_2882	0.29	-2.0
3,423,021	-		Sama_2882	0.33	+1.0
3,423,052	+		Sama_2882	0.39	-1.2
3,423,052	+		Sama_2882	0.39	-1.2
3,423,052	+		Sama_2882	0.39	+0.2
3,423,053	-		Sama_2882	0.39	+0.5
3,423,053	-		Sama_2882	0.39	-0.3
3,423,053	-		Sama_2882	0.39	-0.6
3,423,053	-		Sama_2882	0.39	-0.3
3,423,070	+		Sama_2882	0.42	+0.1
3,423,070	+		Sama_2882	0.42	-0.3
3,423,070	+		Sama_2882	0.42	-0.8
3,423,070	+		Sama_2882	0.42	+1.1
3,423,071	-		Sama_2882	0.42	+4.1
3,423,071	-		Sama_2882	0.42	+1.9
3,423,071	-		Sama_2882	0.42	-1.3
3,423,072	+		Sama_2882	0.43	+0.5
3,423,072	+		Sama_2882	0.43	-0.3
3,423,072	+		Sama_2882	0.43	-0.1
3,423,072	+		Sama_2882	0.43	-1.6
3,423,072	+		Sama_2882	0.43	-2.4
3,423,072	+		Sama_2882	0.43	+1.8
3,423,072	+		Sama_2882	0.43	-0.3
3,423,073	-		Sama_2882	0.43	-3.7
3,423,073	-		Sama_2882	0.43	+1.9
3,423,073	-		Sama_2882	0.43	-0.4
3,423,073	-		Sama_2882	0.43	-1.4
3,423,073	-		Sama_2882	0.43	-0.8
3,423,073	-		Sama_2882	0.43	-2.3
3,423,091	+		Sama_2882	0.46	-2.7
3,423,176	-		Sama_2882	0.62	-1.0
3,423,230	+		Sama_2882	0.72	-1.6
3,423,230	+		Sama_2882	0.72	-1.7
3,423,230	+		Sama_2882	0.72	-3.0
3,423,230	+		Sama_2882	0.72	-0.8
3,423,230	+		Sama_2882	0.72	+3.0
3,423,230	+		Sama_2882	0.72	-3.0
3,423,230	+		Sama_2882	0.72	-2.1
3,423,230	+		Sama_2882	0.72	-0.5
3,423,230	+		Sama_2882	0.72	-1.7
3,423,230	+		Sama_2882	0.72	+0.4
3,423,231	-		Sama_2882	0.72	-2.7
3,423,231	-		Sama_2882	0.72	-2.5
3,423,364	+				-2.0
3,423,393	+				-3.2
3,423,393	+				+2.1
3,423,418	+				-0.6
3,423,418	+				+0.6
3,423,418	+				-0.3
3,423,418	+				-2.1
3,423,418	+				+1.5
3,423,418	+				+0.4
3,423,418	+				+3.1
3,423,419	-				-2.4
3,423,431	-				+1.7
3,423,431	-				+1.3
3,423,431	-				+4.4
3,423,487	+				-0.1
3,423,487	+				+1.5
3,423,488	-				+0.9
3,423,524	+				-1.5
3,423,540	+				+2.1
3,423,540	+				-3.0
3,423,540	+				+1.9
3,423,540	+				-2.5
3,423,541	-				-0.2
3,423,541	-				-1.6
3,423,575	+				+0.1
3,423,575	+				-1.0
3,423,576	-				-3.5
3,423,576	-				-0.7
3,423,576	-				+0.4
3,423,576	-				+1.4
3,423,595	+				-1.0
3,423,595	+				-1.0
3,423,596	-				-1.7
3,423,596	-				-1.3
3,423,608	+				-0.2
3,423,608	+				-0.1
3,423,609	-				+1.4
3,423,668	+				+1.2
3,423,668	+				-3.8
3,423,668	+				-1.6
3,423,668	+				+0.4
3,423,668	+				-1.8
3,423,668	+				-1.3
3,423,669	-				-0.7
3,423,669	-				-1.8
3,423,669	-				+0.2
3,423,669	-				-0.5
3,423,669	-				+0.1
3,423,669	-				+0.9
3,423,669	-				+1.2
3,423,671	+				+2.1
3,423,672	-				-1.1
3,423,672	-				-0.3
3,423,672	-				+1.8
3,423,811	+		Sama_2883	0.19	+0.6
3,423,811	+		Sama_2883	0.19	-1.8
3,423,811	+		Sama_2883	0.19	-1.7
3,423,811	+		Sama_2883	0.19	-1.0
3,423,811	+		Sama_2883	0.19	-0.1
3,423,811	+		Sama_2883	0.19	-1.3
3,423,811	+		Sama_2883	0.19	-2.3
3,423,812	-		Sama_2883	0.19	+0.4
3,423,812	-		Sama_2883	0.19	-0.5
3,423,812	-		Sama_2883	0.19	-0.1
3,423,866	+		Sama_2883	0.23	-0.2
3,423,892	+		Sama_2883	0.25	+1.1
3,423,912	+		Sama_2883	0.27	-1.8
3,423,912	+		Sama_2883	0.27	-1.1
3,423,913	-		Sama_2883	0.27	-1.8
3,423,951	+		Sama_2883	0.30	+1.0
3,423,952	-		Sama_2883	0.30	-0.6
3,423,952	-		Sama_2883	0.30	-3.6
3,423,952	-		Sama_2883	0.30	-0.0
3,424,101	+		Sama_2883	0.42	+0.5
3,424,101	+		Sama_2883	0.42	-1.1
3,424,101	+		Sama_2883	0.42	+4.1
3,424,101	+		Sama_2883	0.42	-2.7
3,424,102	-		Sama_2883	0.42	+0.5
3,424,102	-		Sama_2883	0.42	-1.6
3,424,102	-		Sama_2883	0.42	+0.1
3,424,102	-		Sama_2883	0.42	+1.4
3,424,102	-		Sama_2883	0.42	+0.7
3,424,102	-		Sama_2883	0.42	+0.8
3,424,102	-		Sama_2883	0.42	+1.7
3,424,113	+		Sama_2883	0.43	-0.2
3,424,113	+		Sama_2883	0.43	+0.9
3,424,113	+		Sama_2883	0.43	+0.9
3,424,114	-		Sama_2883	0.43	+0.9
3,424,114	-		Sama_2883	0.43	-1.5
3,424,114	-		Sama_2883	0.43	-0.4
3,424,114	-		Sama_2883	0.43	-1.6
3,424,114	-		Sama_2883	0.43	+2.0
3,424,199	+		Sama_2883	0.50	+1.9
3,424,199	+		Sama_2883	0.50	+0.3
3,424,199	+		Sama_2883	0.50	+0.1
3,424,199	+		Sama_2883	0.50	+1.1
3,424,199	+		Sama_2883	0.50	+0.7
3,424,199	+		Sama_2883	0.50	+3.6
3,424,199	+		Sama_2883	0.50	+0.5
3,424,200	-		Sama_2883	0.50	+0.2
3,424,200	-		Sama_2883	0.50	-1.5
3,424,200	-		Sama_2883	0.50	+1.0
3,424,210	+		Sama_2883	0.51	+1.9
3,424,237	-		Sama_2883	0.53	+3.4
3,424,237	-		Sama_2883	0.53	-2.1
3,424,240	+		Sama_2883	0.53	-0.5
3,424,240	+		Sama_2883	0.53	+0.6
3,424,240	+		Sama_2883	0.53	+2.8
3,424,241	-		Sama_2883	0.53	-1.7
3,424,296	-		Sama_2883	0.58	-2.0
3,424,296	-		Sama_2883	0.58	+0.7
3,424,296	-		Sama_2883	0.58	+1.7
3,424,317	+		Sama_2883	0.60	-1.2
3,424,317	+		Sama_2883	0.60	-1.4
3,424,318	-		Sama_2883	0.60	+3.1
3,424,318	-		Sama_2883	0.60	+1.0
3,424,352	+		Sama_2883	0.62	+0.2
3,424,353	-		Sama_2883	0.62	+5.6
3,424,353	-		Sama_2883	0.62	+1.0
3,424,356	+		Sama_2883	0.63	-1.0
3,424,356	+		Sama_2883	0.63	-0.4
3,424,356	+		Sama_2883	0.63	+1.7
3,424,356	+		Sama_2883	0.63	+1.0
3,424,356	+		Sama_2883	0.63	-1.8
3,424,357	-		Sama_2883	0.63	+0.9
3,424,437	+		Sama_2883	0.69	-1.8
3,424,437	+		Sama_2883	0.69	+0.4
3,424,437	+		Sama_2883	0.69	-2.9
3,424,437	+		Sama_2883	0.69	+2.4
3,424,437	+		Sama_2883	0.69	-1.6
3,424,437	+		Sama_2883	0.69	+0.8
3,424,437	+		Sama_2883	0.69	-1.1
3,424,438	-		Sama_2883	0.69	-1.4
3,424,438	-		Sama_2883	0.69	-1.2
3,424,456	+		Sama_2883	0.71	-0.8
3,424,457	-		Sama_2883	0.71	-0.9
3,424,457	-		Sama_2883	0.71	-1.8
3,424,457	-		Sama_2883	0.71	-0.2
3,424,462	+		Sama_2883	0.71	+1.7
3,424,463	-		Sama_2883	0.71	+2.2
3,424,463	-		Sama_2883	0.71	-2.7
3,424,463	-		Sama_2883	0.71	+3.2
3,424,467	+		Sama_2883	0.72	+0.1
3,424,468	-		Sama_2883	0.72	-3.2
3,424,506	+		Sama_2883	0.75	+1.4
3,424,506	+		Sama_2883	0.75	-0.4
3,424,507	-		Sama_2883	0.75	-3.2
3,424,507	-		Sama_2883	0.75	-0.4
3,424,507	-		Sama_2883	0.75	-0.5
3,424,555	-		Sama_2883	0.79	+3.1
3,424,583	+		Sama_2883	0.81	-1.3
3,424,610	+		Sama_2883	0.83	-1.0
3,424,610	+		Sama_2883	0.83	+1.0
3,424,611	-		Sama_2883	0.83	-1.4
3,424,622	+		Sama_2883	0.84	-0.6
3,424,623	-		Sama_2883	0.84	-0.6
3,424,623	-		Sama_2883	0.84	+0.3
3,424,623	-		Sama_2883	0.84	+2.4
3,424,656	+		Sama_2883	0.87	+4.5
3,424,666	+		Sama_2883	0.88	+1.3
3,424,689	+		Sama_2883	0.90	-2.1
3,424,690	-		Sama_2883	0.90	-0.7
3,424,690	-		Sama_2883	0.90	-0.4
3,424,690	-		Sama_2883	0.90	-0.3
3,424,690	-		Sama_2883	0.90	+1.5
3,424,692	-		Sama_2883	0.90	+0.3
3,424,845	+				-1.0
3,424,845	+				+1.0
3,424,845	+				-1.0
3,424,845	+				-1.2
3,424,846	-				+2.2
3,424,846	-				-1.5
3,424,846	-				-1.0
3,424,846	-				-1.7
3,424,922	+				-2.1
3,424,922	+				-0.2
3,424,923	-				-0.1
3,424,923	-				+0.7
3,424,926	-		Sama_2884	0.10	+0.9
3,424,935	+		Sama_2884	0.11	-0.0
3,424,935	+		Sama_2884	0.11	-0.2
3,424,936	-		Sama_2884	0.11	-0.0
3,424,936	-		Sama_2884	0.11	+3.4
3,424,936	-		Sama_2884	0.11	+0.1
3,424,936	-		Sama_2884	0.11	+1.6
3,424,937	+		Sama_2884	0.11	+2.0
3,424,938	-		Sama_2884	0.12	+1.8
3,425,042	+		Sama_2884	0.24	+2.5
3,425,043	-		Sama_2884	0.24	+0.8
3,425,043	-		Sama_2884	0.24	+3.7
3,425,043	-		Sama_2884	0.24	-0.7
3,425,043	-		Sama_2884	0.24	-0.3
3,425,049	+		Sama_2884	0.25	+0.9
3,425,049	+		Sama_2884	0.25	-1.2
3,425,049	+		Sama_2884	0.25	+1.0
3,425,049	+		Sama_2884	0.25	-2.1
3,425,049	+		Sama_2884	0.25	-1.1
3,425,049	+		Sama_2884	0.25	+1.5
3,425,050	-		Sama_2884	0.25	-1.0
3,425,050	-		Sama_2884	0.25	+3.6
3,425,050	-		Sama_2884	0.25	+2.7
3,425,050	-		Sama_2884	0.25	-1.8
3,425,053	+		Sama_2884	0.25	+0.3
3,425,053	+		Sama_2884	0.25	-0.9
3,425,054	-		Sama_2884	0.25	+2.8
3,425,054	-		Sama_2884	0.25	+0.6
3,425,054	-		Sama_2884	0.25	-1.7
3,425,087	+		Sama_2884	0.29	-0.7
3,425,087	+		Sama_2884	0.29	-2.2
3,425,088	-		Sama_2884	0.29	+0.2
3,425,088	-		Sama_2884	0.29	-1.1
3,425,088	-		Sama_2884	0.29	-2.0
3,425,088	-		Sama_2884	0.29	+1.0
3,425,120	-		Sama_2884	0.33	+2.6
3,425,160	+		Sama_2884	0.38	-0.4
3,425,161	-		Sama_2884	0.38	+1.2
3,425,184	-		Sama_2884	0.41	-1.4
3,425,184	-		Sama_2884	0.41	-3.5
3,425,222	+		Sama_2884	0.45	+1.4
3,425,222	+		Sama_2884	0.45	+0.3
3,425,222	+		Sama_2884	0.45	-1.0
3,425,223	-		Sama_2884	0.45	-1.8
3,425,223	-		Sama_2884	0.45	+0.4
3,425,223	-		Sama_2884	0.45	-0.9
3,425,223	-		Sama_2884	0.45	+0.3
3,425,240	+		Sama_2884	0.47	-2.2
3,425,241	-		Sama_2884	0.47	+0.3
3,425,241	-		Sama_2884	0.47	+0.4
3,425,357	+		Sama_2884	0.61	-1.2
3,425,357	+		Sama_2884	0.61	-2.1
3,425,358	-		Sama_2884	0.61	+0.7
3,425,358	-		Sama_2884	0.61	-1.0
3,425,358	-		Sama_2884	0.61	-1.7
3,425,373	+		Sama_2884	0.63	-2.0
3,425,374	-		Sama_2884	0.63	-0.1
3,425,374	-		Sama_2884	0.63	-2.0
3,425,388	+		Sama_2884	0.65	-0.1
3,425,389	-		Sama_2884	0.65	+2.4
3,425,399	+		Sama_2884	0.66	+0.1
3,425,420	-		Sama_2884	0.69	-3.4
3,425,453	+		Sama_2884	0.72	+2.2
3,425,453	+		Sama_2884	0.72	-1.9
3,425,454	-		Sama_2884	0.73	-0.7
3,425,513	+		Sama_2884	0.80	-2.0
3,425,513	+		Sama_2884	0.80	+1.7
3,425,514	-		Sama_2884	0.80	-1.4
3,425,532	+		Sama_2884	0.82	+2.8
3,425,532	+		Sama_2884	0.82	+1.5
3,425,532	+		Sama_2884	0.82	-1.3
3,425,569	+		Sama_2884	0.86	+1.0
3,425,569	+		Sama_2884	0.86	-0.5
3,425,569	+		Sama_2884	0.86	-1.3
3,425,569	+		Sama_2884	0.86	+2.2
3,425,570	-		Sama_2884	0.86	+1.4
3,425,570	-		Sama_2884	0.86	-2.1
3,425,570	-		Sama_2884	0.86	+0.3
3,425,612	+				-2.2
3,425,773	-				-0.4
3,425,793	+				-0.2
3,425,793	+				-1.4
3,425,793	+				-2.0
3,425,794	-				-1.4
3,425,794	-				+3.0
3,425,794	-				+0.4
3,425,794	-				-0.6
3,425,794	-				-1.8
3,425,795	+				-0.5
3,425,796	-				+0.6
3,425,796	-				-1.7
3,425,796	-				-0.5
3,425,796	-				-0.2
3,425,812	-				-1.0