Strain Fitness in Shewanella amazonensis SB2B around Sama_2788

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,328,793	-		Sama_2786	0.71	-1.7
3,328,824	-		Sama_2786	0.76	-1.2
3,328,925	+				-0.4
3,328,925	+				-2.4
3,328,925	+				+0.3
3,328,926	-				-1.8
3,328,926	-				-2.7
3,328,926	-				-1.7
3,328,986	+				-0.5
3,328,986	+				-2.7
3,328,987	-				-1.6
3,328,994	+				-3.8
3,328,995	-				-2.6
3,328,995	-				-1.0
3,329,012	+				-0.2
3,329,012	+				+1.2
3,329,012	+				-3.1
3,329,012	+				-2.7
3,329,013	-				+2.6
3,329,013	-				-1.1
3,329,013	-				+0.9
3,329,016	-				-1.3
3,329,022	-				-3.1
3,329,030	+				-1.1
3,329,063	+				+1.6
3,329,063	+				+0.0
3,329,063	+				-0.4
3,329,063	+				-0.5
3,329,063	+				+2.0
3,329,064	-				+2.4
3,329,064	-				+3.3
3,329,064	-				+0.9
3,329,064	-				-2.0
3,329,064	-				-0.7
3,329,068	-				+2.2
3,329,121	-				-0.4
3,329,124	-				-1.8
3,329,124	-				-0.5
3,329,234	+		Sama_2787	0.17	-1.2
3,329,234	+		Sama_2787	0.17	-0.4
3,329,234	+		Sama_2787	0.17	-1.2
3,329,235	-		Sama_2787	0.17	+1.3
3,329,235	-		Sama_2787	0.17	-1.1
3,329,235	-		Sama_2787	0.17	-0.2
3,329,243	+		Sama_2787	0.18	+0.4
3,329,243	+		Sama_2787	0.18	-1.0
3,329,244	-		Sama_2787	0.18	+0.3
3,329,244	-		Sama_2787	0.18	-1.5
3,329,257	+		Sama_2787	0.21	-1.5
3,329,257	+		Sama_2787	0.21	-0.2
3,329,258	-		Sama_2787	0.21	+1.3
3,329,347	+		Sama_2787	0.36	-0.3
3,329,347	+		Sama_2787	0.36	+1.9
3,329,347	+		Sama_2787	0.36	-1.8
3,329,347	+		Sama_2787	0.36	-1.8
3,329,347	+		Sama_2787	0.36	+3.4
3,329,347	+		Sama_2787	0.36	-1.2
3,329,347	+		Sama_2787	0.36	+0.3
3,329,347	+		Sama_2787	0.36	-0.5
3,329,347	+		Sama_2787	0.36	-0.7
3,329,347	+		Sama_2787	0.36	+3.7
3,329,347	+		Sama_2787	0.36	+0.8
3,329,347	+		Sama_2787	0.36	-2.1
3,329,347	+		Sama_2787	0.36	+0.8
3,329,347	+		Sama_2787	0.36	-0.4
3,329,347	+		Sama_2787	0.36	+1.8
3,329,347	+		Sama_2787	0.36	+4.1
3,329,347	+		Sama_2787	0.36	-1.5
3,329,348	-		Sama_2787	0.36	-1.7
3,329,348	-		Sama_2787	0.36	-1.1
3,329,348	-		Sama_2787	0.36	-0.3
3,329,348	-		Sama_2787	0.36	-1.2
3,329,348	-		Sama_2787	0.36	+1.8
3,329,348	-		Sama_2787	0.36	-2.7
3,329,348	-		Sama_2787	0.36	-0.8
3,329,348	-		Sama_2787	0.36	+1.5
3,329,348	-		Sama_2787	0.36	+2.8
3,329,504	+		Sama_2787	0.63	-0.8
3,329,504	+		Sama_2787	0.63	-1.0
3,329,504	+		Sama_2787	0.63	-0.7
3,329,505	-		Sama_2787	0.63	+2.4
3,329,573	+		Sama_2787	0.75	-0.5
3,329,622	-		Sama_2787	0.83	-2.9
3,329,662	+		Sama_2787	0.90	+0.8
3,329,663	-				+1.7
3,329,719	+				-0.2
3,329,719	+				+1.7
3,329,719	+				-0.4
3,329,719	+				+0.7
3,329,719	+				-1.3
3,329,720	-				-1.0
3,329,720	-				+4.2
3,329,720	-				+1.0
3,329,825	+		Sama_2788	0.20	-1.3
3,329,825	+		Sama_2788	0.20	+0.0
3,329,826	-		Sama_2788	0.20	-1.7
3,329,831	+		Sama_2788	0.21	+1.2
3,329,832	-		Sama_2788	0.22	+1.9
3,329,832	-		Sama_2788	0.22	-1.3
3,329,832	-		Sama_2788	0.22	+0.8
3,329,832	-		Sama_2788	0.22	-3.2
3,329,848	+		Sama_2788	0.26	-2.4
3,329,848	+		Sama_2788	0.26	-1.7
3,329,848	+		Sama_2788	0.26	-1.5
3,329,849	-		Sama_2788	0.26	+0.1
3,329,849	-		Sama_2788	0.26	-0.9
3,329,849	-		Sama_2788	0.26	-1.4
3,329,849	-		Sama_2788	0.26	+1.1
3,329,849	-		Sama_2788	0.26	-0.1
3,329,932	+		Sama_2788	0.48	+3.3
3,329,933	-		Sama_2788	0.48	+1.1
3,329,994	+		Sama_2788	0.64	-0.5
3,329,994	+		Sama_2788	0.64	-0.4
3,329,995	-		Sama_2788	0.64	-1.4
3,330,013	-		Sama_2788	0.69	-0.1
3,330,061	-		Sama_2788	0.81	+1.2
3,330,061	-		Sama_2788	0.81	-1.5
3,330,076	+		Sama_2788	0.85	-0.5
3,330,076	+		Sama_2788	0.85	+1.7
3,330,077	-		Sama_2788	0.85	+0.4
3,330,077	-		Sama_2788	0.85	-1.7
3,330,123	+				+1.7
3,330,123	+				+2.0
3,330,124	-				-0.1
3,330,124	-				-2.0
3,330,127	+				-0.4
3,330,127	+				+0.8
3,330,153	+				-1.2
3,330,177	+				+0.4
3,330,177	+				+2.8
3,330,177	+				-1.1
3,330,178	-				+0.6
3,330,193	+				-0.2
3,330,194	-				+0.5
3,330,194	-				-1.9
3,330,194	-				-1.2
3,330,233	+		Sama_2789	0.14	-1.3
3,330,326	+		Sama_2789	0.36	-1.2
3,330,343	-		Sama_2789	0.40	+0.6
3,330,346	+		Sama_2789	0.40	-0.2
3,330,346	+		Sama_2789	0.40	-0.0
3,330,509	+		Sama_2789	0.78	-1.3
3,330,510	-		Sama_2789	0.79	+0.5
3,330,551	+		Sama_2789	0.88	-1.6
3,330,551	+		Sama_2789	0.88	-2.9
3,330,551	+		Sama_2789	0.88	-1.6
3,330,584	+				+0.3
3,330,834	+		Sama_2790	0.66	-3.0
3,330,835	-		Sama_2790	0.66	-1.0
3,330,868	+		Sama_2790	0.74	-1.6
3,330,868	+		Sama_2790	0.74	-0.4
3,330,868	+		Sama_2790	0.74	-2.8
3,330,912	+		Sama_2790	0.84	+0.4
3,330,912	+		Sama_2790	0.84	-0.3
3,330,912	+		Sama_2790	0.84	+1.3
3,330,912	+		Sama_2790	0.84	+3.1
3,330,913	-		Sama_2790	0.85	+2.2
3,330,913	-		Sama_2790	0.85	-0.5
3,330,913	-		Sama_2790	0.85	-0.0
3,330,914	+		Sama_2790	0.85	+0.6
3,330,914	+		Sama_2790	0.85	+1.3
3,330,914	+		Sama_2790	0.85	+0.9
3,330,914	+		Sama_2790	0.85	-1.2
3,330,914	+		Sama_2790	0.85	-0.9
3,330,914	+		Sama_2790	0.85	-0.9
3,330,914	+		Sama_2790	0.85	+0.1
3,330,914	+		Sama_2790	0.85	+2.6
3,330,914	+		Sama_2790	0.85	-1.1
3,330,914	+		Sama_2790	0.85	+0.3
3,330,915	-		Sama_2790	0.85	+0.0
3,330,915	-		Sama_2790	0.85	+1.1
3,330,915	-		Sama_2790	0.85	+0.7
3,330,915	-		Sama_2790	0.85	+0.6
3,330,915	-		Sama_2790	0.85	-1.9
3,330,915	-		Sama_2790	0.85	+3.6
3,330,915	-		Sama_2790	0.85	-1.5
3,330,915	-		Sama_2790	0.85	+1.4
3,330,955	+				+0.3
3,331,007	-				-1.6
3,331,007	-				+1.1
3,331,007	-				+0.2
3,331,025	+				+1.1
3,331,026	-				+0.2
3,331,026	-				+1.4
3,331,026	-				-0.2
3,331,026	-				+1.4
3,331,070	+				+0.9
3,331,070	+				+1.5
3,331,070	+				-1.8
3,331,071	-				-1.1
3,331,071	-				+2.1
3,331,071	-				-0.5
3,331,071	-				+1.2
3,331,073	-				+0.0
3,331,073	-				+0.2
3,331,073	-				+1.2
3,331,090	-				-0.0