Strain Fitness in Shewanella amazonensis SB2B around Sama_2739

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,271,777	+				+1.7
3,271,777	+				-0.6
3,271,777	+				-1.4
3,271,777	+				+3.5
3,271,778	-				-1.6
3,271,778	-				+1.8
3,271,821	+				-2.1
3,271,821	+				+0.6
3,271,821	+				+1.9
3,271,821	+				+0.9
3,271,822	-				-0.4
3,271,822	-				+5.2
3,271,822	-				-0.9
3,271,822	-				-1.5
3,271,822	-				-2.0
3,271,822	-				-2.4
3,271,822	-				+3.0
3,271,822	-				-0.1
3,271,873	+				-1.1
3,271,977	+		Sama_2738	0.14	+1.6
3,271,978	-		Sama_2738	0.15	-1.7
3,272,002	+		Sama_2738	0.18	-1.8
3,272,003	-		Sama_2738	0.18	+0.3
3,272,131	-		Sama_2738	0.36	+1.1
3,272,131	-		Sama_2738	0.36	+2.3
3,272,181	-		Sama_2738	0.42	+1.1
3,272,182	+		Sama_2738	0.43	-0.1
3,272,183	-		Sama_2738	0.43	+0.5
3,272,183	-		Sama_2738	0.43	-2.0
3,272,215	+		Sama_2738	0.47	-1.8
3,272,271	-		Sama_2738	0.55	+1.6
3,272,271	-		Sama_2738	0.55	+2.2
3,272,368	+		Sama_2738	0.68	-1.2
3,272,369	-		Sama_2738	0.68	+0.1
3,272,410	+		Sama_2738	0.74	+3.7
3,272,410	+		Sama_2738	0.74	-1.1
3,272,411	-		Sama_2738	0.74	-1.2
3,272,411	-		Sama_2738	0.74	+0.6
3,272,629	+				+0.9
3,272,630	-				+0.2
3,272,630	-				-1.9
3,272,630	-				+1.7
3,272,641	+				-1.3
3,272,643	+				-2.4
3,272,643	+				-1.9
3,272,643	+				-0.6
3,272,643	+				+1.4
3,272,644	-				-2.2
3,272,644	-				-0.8
3,272,644	-				-0.3
3,272,644	-				-0.3
3,272,644	-				-1.4
3,272,696	+				+2.3
3,272,697	-				+0.4
3,272,714	+				-0.3
3,272,714	+				+0.4
3,272,715	-				-1.0
3,272,801	+				-0.7
3,272,801	+				+0.2
3,272,801	+				-1.2
3,272,801	+				-2.8
3,272,817	-				-0.3
3,272,848	+		Sama_2739	0.11	-1.1
3,272,884	-		Sama_2739	0.15	-1.4
3,272,884	-		Sama_2739	0.15	-0.8
3,272,945	+		Sama_2739	0.21	-1.3
3,272,945	+		Sama_2739	0.21	-1.2
3,272,945	+		Sama_2739	0.21	-1.2
3,272,946	-		Sama_2739	0.21	-1.5
3,272,946	-		Sama_2739	0.21	-1.2
3,272,953	-		Sama_2739	0.22	-2.7
3,273,030	+		Sama_2739	0.30	-0.5
3,273,031	-		Sama_2739	0.30	-1.6
3,273,121	-		Sama_2739	0.39	-1.7
3,273,129	+		Sama_2739	0.40	+0.2
3,273,129	+		Sama_2739	0.40	-0.7
3,273,129	+		Sama_2739	0.40	-1.2
3,273,129	+		Sama_2739	0.40	-2.8
3,273,130	-		Sama_2739	0.40	+0.0
3,273,130	-		Sama_2739	0.40	-0.7
3,273,206	+		Sama_2739	0.48	-0.8
3,273,207	-		Sama_2739	0.48	-1.0
3,273,207	-		Sama_2739	0.48	-1.4
3,273,241	+		Sama_2739	0.52	+0.4
3,273,241	+		Sama_2739	0.52	+1.7
3,273,242	-		Sama_2739	0.52	+0.6
3,273,386	+		Sama_2739	0.67	+4.0
3,273,387	-		Sama_2739	0.67	-2.8
3,273,411	+		Sama_2739	0.69	+1.0
3,273,411	+		Sama_2739	0.69	-0.8
3,273,411	+		Sama_2739	0.69	-1.3
3,273,411	+		Sama_2739	0.69	-2.7
3,273,411	+		Sama_2739	0.69	-1.4
3,273,411	+		Sama_2739	0.69	-0.8
3,273,412	-		Sama_2739	0.70	-0.7
3,273,461	+		Sama_2739	0.75	-0.3
3,273,461	+		Sama_2739	0.75	-2.1
3,273,461	+		Sama_2739	0.75	-0.2
3,273,480	+		Sama_2739	0.77	+0.2
3,273,481	-		Sama_2739	0.77	-1.7
3,273,481	-		Sama_2739	0.77	-1.0
3,273,499	+		Sama_2739	0.79	-0.5
3,273,499	+		Sama_2739	0.79	-1.6
3,273,500	-		Sama_2739	0.79	-0.1
3,273,500	-		Sama_2739	0.79	-0.4
3,273,500	-		Sama_2739	0.79	+2.0
3,273,500	-		Sama_2739	0.79	-1.7
3,273,501	+		Sama_2739	0.79	-0.3
3,273,502	-		Sama_2739	0.79	-0.9
3,273,502	-		Sama_2739	0.79	-0.7
3,273,543	+		Sama_2739	0.83	+2.5
3,273,548	+		Sama_2739	0.84	-1.3
3,273,556	+		Sama_2739	0.84	-2.7
3,273,556	+		Sama_2739	0.84	-0.5
3,273,557	-		Sama_2739	0.85	-0.2
3,273,557	-		Sama_2739	0.85	-1.7
3,273,557	-		Sama_2739	0.85	-0.8
3,273,557	-		Sama_2739	0.85	-0.1
3,273,557	-		Sama_2739	0.85	-1.5
3,273,565	-		Sama_2739	0.85	-1.8
3,273,610	+				-0.5
3,273,611	-				-0.3
3,273,611	-				-0.3
3,273,611	-				-0.8
3,273,611	-				-0.1
3,273,611	-				-0.8
3,273,611	-				-0.3
3,273,611	-				-1.2
3,273,611	-				-0.7
3,273,611	-				-1.5
3,273,687	+				-0.8
3,273,687	+				-0.1
3,273,688	-				-0.6
3,273,688	-				-0.2
3,273,752	+				+1.0
3,273,753	-				+0.6
3,273,760	+				-0.2
3,273,761	-				+1.9
3,273,761	-				+0.3
3,273,761	-				+0.0
3,273,761	-				-1.4
3,273,761	-				+0.0
3,273,767	-				-0.4
3,273,767	-				+0.3
3,273,767	-				-1.4
3,273,810	+				-1.1
3,273,810	+				-0.8
3,273,810	+				-3.0
3,273,811	-				-2.0
3,273,811	-				-3.2
3,273,856	+				-1.0
3,273,857	-				-0.5
3,273,866	+				-1.7
3,273,866	+				-1.9
3,273,867	-				-1.6
3,273,884	+				-1.8
3,273,884	+				-0.4
3,273,884	+				-0.5
3,273,884	+				-0.4
3,273,884	+				-1.2
3,273,884	+				-1.1
3,273,885	-				-1.6
3,273,885	-				-2.9
3,273,976	+		Sama_2740	0.16	+0.6
3,273,977	-		Sama_2740	0.16	-0.3
3,273,977	-		Sama_2740	0.16	-2.1
3,273,977	-		Sama_2740	0.16	-1.3
3,273,986	+		Sama_2740	0.16	-2.4
3,273,987	-		Sama_2740	0.17	-1.0
3,273,987	-		Sama_2740	0.17	-1.4
3,273,987	-		Sama_2740	0.17	-0.5
3,274,008	+		Sama_2740	0.18	-1.0
3,274,009	-		Sama_2740	0.18	+3.0
3,274,043	+		Sama_2740	0.21	-2.7
3,274,043	+		Sama_2740	0.21	-2.0
3,274,043	+		Sama_2740	0.21	-0.3
3,274,044	-		Sama_2740	0.21	-1.9
3,274,044	-		Sama_2740	0.21	-1.7
3,274,044	-		Sama_2740	0.21	-2.8
3,274,044	-		Sama_2740	0.21	+0.9
3,274,047	+		Sama_2740	0.21	-0.5
3,274,047	+		Sama_2740	0.21	-3.1
3,274,048	-		Sama_2740	0.21	-3.1
3,274,048	-		Sama_2740	0.21	-0.7
3,274,048	-		Sama_2740	0.21	-1.5
3,274,048	-		Sama_2740	0.21	-0.2
3,274,055	+		Sama_2740	0.22	-1.4
3,274,056	-		Sama_2740	0.22	-1.6
3,274,083	+		Sama_2740	0.24	-3.2
3,274,123	+		Sama_2740	0.27	-2.1
3,274,127	+		Sama_2740	0.27	+0.8
3,274,127	+		Sama_2740	0.27	-3.0
3,274,127	+		Sama_2740	0.27	-2.4
3,274,130	+		Sama_2740	0.27	-0.5
3,274,131	-		Sama_2740	0.27	-1.1
3,274,131	-		Sama_2740	0.27	+0.6
3,274,258	+		Sama_2740	0.37	-0.4
3,274,337	+		Sama_2740	0.43	-1.1
3,274,337	+		Sama_2740	0.43	-0.7
3,274,338	-		Sama_2740	0.43	-2.2
3,274,338	-		Sama_2740	0.43	-0.7
3,274,339	+		Sama_2740	0.43	-1.5
3,274,340	-		Sama_2740	0.43	-1.7
3,274,340	-		Sama_2740	0.43	+2.2
3,274,340	-		Sama_2740	0.43	-2.3
3,274,428	+		Sama_2740	0.50	+2.0
3,274,429	-		Sama_2740	0.50	-2.0
3,274,429	-		Sama_2740	0.50	-1.8
3,274,429	-		Sama_2740	0.50	+1.8
3,274,448	+		Sama_2740	0.51	-3.1
3,274,449	-		Sama_2740	0.51	+0.9
3,274,472	+		Sama_2740	0.53	+2.4
3,274,472	+		Sama_2740	0.53	+2.4
3,274,472	+		Sama_2740	0.53	-0.3
3,274,473	-		Sama_2740	0.53	-1.7
3,274,473	-		Sama_2740	0.53	-0.7
3,274,473	-		Sama_2740	0.53	-3.0
3,274,486	+		Sama_2740	0.54	-1.9
3,274,486	+		Sama_2740	0.54	-2.2
3,274,486	+		Sama_2740	0.54	-1.5
3,274,487	-		Sama_2740	0.54	+0.0
3,274,487	-		Sama_2740	0.54	-2.1
3,274,487	-		Sama_2740	0.54	-0.2
3,274,487	-		Sama_2740	0.54	-0.6
3,274,487	-		Sama_2740	0.54	-2.2
3,274,487	-		Sama_2740	0.54	-2.4
3,274,508	+		Sama_2740	0.56	-0.4
3,274,509	-		Sama_2740	0.56	-1.7
3,274,509	-		Sama_2740	0.56	-1.9
3,274,509	-		Sama_2740	0.56	+0.1
3,274,509	-		Sama_2740	0.56	-1.0
3,274,525	+		Sama_2740	0.57	-2.3
3,274,525	+		Sama_2740	0.57	-0.5
3,274,525	+		Sama_2740	0.57	-0.8
3,274,569	+		Sama_2740	0.60	-0.3
3,274,569	+		Sama_2740	0.60	+0.1
3,274,570	-		Sama_2740	0.60	+0.3
3,274,596	+		Sama_2740	0.62	-0.5
3,274,597	-		Sama_2740	0.63	-1.4
3,274,597	-		Sama_2740	0.63	-2.7
3,274,597	-		Sama_2740	0.63	-3.1
3,274,597	-		Sama_2740	0.63	-1.5
3,274,617	+		Sama_2740	0.64	-0.5
3,274,617	+		Sama_2740	0.64	+1.3
3,274,618	-		Sama_2740	0.64	+1.7
3,274,618	-		Sama_2740	0.64	+0.5
3,274,622	+		Sama_2740	0.64	+0.4
3,274,623	-		Sama_2740	0.64	-2.1
3,274,644	-		Sama_2740	0.66	-0.3
3,274,691	+		Sama_2740	0.70	+0.6
3,274,692	-		Sama_2740	0.70	-2.2
3,274,697	+		Sama_2740	0.70	-0.5
3,274,697	+		Sama_2740	0.70	-0.7
3,274,697	+		Sama_2740	0.70	-0.8
3,274,698	-		Sama_2740	0.70	-2.0
3,274,698	-		Sama_2740	0.70	+0.3