Strain Fitness in Shewanella amazonensis SB2B around Sama_2680

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
3,208,212	-		Sama_2679	0.59	-0.3
3,208,259	-		Sama_2679	0.62	-0.6
3,208,304	+		Sama_2679	0.64	-1.3
3,208,304	+		Sama_2679	0.64	+0.2
3,208,304	+		Sama_2679	0.64	-0.5
3,208,304	+		Sama_2679	0.64	-1.0
3,208,304	+		Sama_2679	0.64	+2.6
3,208,305	-		Sama_2679	0.64	-0.1
3,208,305	-		Sama_2679	0.64	-1.1
3,208,305	-		Sama_2679	0.64	-2.2
3,208,308	+		Sama_2679	0.65	+2.0
3,208,308	+		Sama_2679	0.65	+0.2
3,208,308	+		Sama_2679	0.65	+0.3
3,208,308	+		Sama_2679	0.65	+1.6
3,208,308	+		Sama_2679	0.65	+2.1
3,208,308	+		Sama_2679	0.65	-0.7
3,208,308	+		Sama_2679	0.65	-0.8
3,208,308	+		Sama_2679	0.65	-2.6
3,208,309	-		Sama_2679	0.65	-1.0
3,208,309	-		Sama_2679	0.65	+1.3
3,208,309	-		Sama_2679	0.65	+1.5
3,208,309	-		Sama_2679	0.65	+0.2
3,208,309	-		Sama_2679	0.65	+0.6
3,208,309	-		Sama_2679	0.65	-2.3
3,208,309	-		Sama_2679	0.65	-2.1
3,208,309	-		Sama_2679	0.65	-2.4
3,208,309	-		Sama_2679	0.65	+0.6
3,208,309	-		Sama_2679	0.65	+1.4
3,208,309	-		Sama_2679	0.65	-0.4
3,208,328	+		Sama_2679	0.66	+2.3
3,208,329	-		Sama_2679	0.66	+0.2
3,208,329	-		Sama_2679	0.66	+0.2
3,208,368	-		Sama_2679	0.68	-0.3
3,208,406	+		Sama_2679	0.70	+0.1
3,208,406	+		Sama_2679	0.70	-1.6
3,208,407	-		Sama_2679	0.70	-1.5
3,208,407	-		Sama_2679	0.70	-0.1
3,208,407	-		Sama_2679	0.70	+0.6
3,208,535	-		Sama_2679	0.77	+0.5
3,208,595	+		Sama_2679	0.81	+0.9
3,208,595	+		Sama_2679	0.81	-0.2
3,208,596	-		Sama_2679	0.81	-0.8
3,208,596	-		Sama_2679	0.81	+0.8
3,208,605	-		Sama_2679	0.81	+1.0
3,208,635	+		Sama_2679	0.83	+1.2
3,208,635	+		Sama_2679	0.83	+2.1
3,208,636	-		Sama_2679	0.83	-2.0
3,208,639	-		Sama_2679	0.83	+0.4
3,208,661	+		Sama_2679	0.84	+0.8
3,208,685	+		Sama_2679	0.86	+0.8
3,208,729	-		Sama_2679	0.88	+0.7
3,208,729	-		Sama_2679	0.88	-1.8
3,208,746	+		Sama_2679	0.89	-0.5
3,208,769	+				+1.9
3,208,770	-				-1.3
3,208,812	+				-0.1
3,208,812	+				+1.2
3,208,812	+				-1.3
3,208,813	-				-2.8
3,208,827	+				-0.5
3,208,828	-				+3.3
3,208,828	-				-2.1
3,208,833	+				-0.5
3,208,834	-				-0.1
3,208,904	+				-0.5
3,208,904	+				-1.8
3,208,945	+				-1.7
3,208,945	+				+1.9
3,208,945	+				-0.2
3,208,945	+				-1.3
3,208,945	+				-1.0
3,208,945	+				-1.1
3,208,945	+				+2.3
3,208,945	+				+0.3
3,208,945	+				-1.8
3,208,945	+				-1.9
3,208,945	+				+0.5
3,208,945	+				+1.8
3,208,945	+				-2.1
3,208,945	+				-1.3
3,208,945	+				+1.2
3,208,945	+				+1.6
3,208,945	+				-1.2
3,208,945	+				+1.1
3,208,945	+				+1.9
3,208,945	+				-0.6
3,208,945	+				-1.1
3,208,946	-				-0.2
3,208,946	-				+0.2
3,208,946	-				-2.5
3,208,946	-				+0.5
3,208,946	-				+2.8
3,208,946	-				-0.7
3,208,946	-				+1.6
3,208,946	-				+1.5
3,208,946	-				-0.2
3,208,946	-				-1.3
3,208,946	-				+0.3
3,208,946	-				-2.5
3,208,946	-				-2.1
3,208,946	-				+2.9
3,208,946	-				+3.0
3,208,947	+				-1.2
3,208,947	+				-1.5
3,208,947	+				-0.2
3,209,000	+				+0.6
3,209,086	+				+0.6
3,209,098	-				+3.2
3,209,098	-				+6.5
3,209,110	+				+0.5
3,209,110	+				+3.7
3,209,110	+				-1.5
3,209,110	+				-2.4
3,209,110	+				+0.2
3,209,110	+				-2.3
3,209,110	+				+1.1
3,209,111	-				-0.7
3,209,111	-				-1.2
3,209,135	+				-1.2
3,209,136	-				-2.0
3,209,288	-				-2.1
3,209,350	+		Sama_2680	0.14	-0.2
3,209,350	+		Sama_2680	0.14	-1.0
3,209,351	-		Sama_2680	0.14	-0.3
3,209,413	+		Sama_2680	0.19	+0.4
3,209,413	+		Sama_2680	0.19	-2.1
3,209,503	-		Sama_2680	0.26	+3.6
3,209,510	-		Sama_2680	0.26	-1.1
3,209,613	+		Sama_2680	0.35	-1.8
3,209,614	-		Sama_2680	0.35	-0.6
3,209,746	+		Sama_2680	0.45	+0.9
3,209,747	-		Sama_2680	0.45	-1.1
3,209,748	+		Sama_2680	0.45	+3.6
3,209,749	-		Sama_2680	0.45	+2.4
3,209,749	-		Sama_2680	0.45	-0.8
3,209,749	-		Sama_2680	0.45	+0.7
3,210,007	-		Sama_2680	0.66	+0.2
3,210,007	-		Sama_2680	0.66	-1.5
3,210,007	-		Sama_2680	0.66	-0.4
3,210,007	-		Sama_2680	0.66	-0.9
3,210,007	-		Sama_2680	0.66	+0.9
3,210,050	+		Sama_2680	0.69	+1.9
3,210,051	-		Sama_2680	0.69	+2.6
3,210,051	-		Sama_2680	0.69	-1.4
3,210,066	+		Sama_2680	0.70	-0.2
3,210,066	+		Sama_2680	0.70	-1.7
3,210,066	+		Sama_2680	0.70	+0.2
3,210,066	+		Sama_2680	0.70	+2.8
3,210,067	-		Sama_2680	0.70	-0.1
3,210,067	-		Sama_2680	0.70	-2.9
3,210,067	-		Sama_2680	0.70	+2.8
3,210,085	+		Sama_2680	0.72	-2.9
3,210,085	+		Sama_2680	0.72	-2.9
3,210,085	+		Sama_2680	0.72	+0.2
3,210,085	+		Sama_2680	0.72	-0.7
3,210,085	+		Sama_2680	0.72	+0.6
3,210,085	+		Sama_2680	0.72	-0.9
3,210,085	+		Sama_2680	0.72	-2.8
3,210,086	-		Sama_2680	0.72	-2.9
3,210,086	-		Sama_2680	0.72	-0.5
3,210,086	-		Sama_2680	0.72	+0.4
3,210,324	-				-0.2
3,210,324	-				+1.4
3,210,346	+				-1.0
3,210,347	-				+1.8
3,210,347	-				+0.3
3,210,414	+				-1.3
3,210,415	-				+0.0
3,210,518	+				+0.4
3,210,519	-				-2.1
3,210,528	+				-2.6
3,210,529	-				-0.1
3,210,565	-				+0.7
3,210,645	+				+3.7
3,210,697	+				-0.8
3,210,697	+				-1.7
3,210,697	+				+1.4
3,210,697	+				-1.8
3,210,698	-				-0.2
3,210,756	+				+2.4
3,210,846	-				+4.5
3,210,879	+		Sama_2681	0.12	+0.2
3,210,879	+		Sama_2681	0.12	+0.3
3,210,879	+		Sama_2681	0.12	+2.1
3,210,879	+		Sama_2681	0.12	-1.6
3,210,880	-		Sama_2681	0.12	-1.4
3,210,880	-		Sama_2681	0.12	+0.1
3,210,880	-		Sama_2681	0.12	-0.8
3,210,910	+		Sama_2681	0.15	-0.1
3,210,910	+		Sama_2681	0.15	-0.8
3,210,910	+		Sama_2681	0.15	-2.3
3,210,910	+		Sama_2681	0.15	-1.3
3,210,910	+		Sama_2681	0.15	-1.5
3,210,910	+		Sama_2681	0.15	-0.3
3,210,910	+		Sama_2681	0.15	-3.0
3,210,911	-		Sama_2681	0.15	+0.0
3,210,911	-		Sama_2681	0.15	+0.9
3,210,911	-		Sama_2681	0.15	-1.8
3,210,936	-		Sama_2681	0.17	-1.1
3,210,936	-		Sama_2681	0.17	-2.7
3,210,994	-		Sama_2681	0.22	-1.6
3,211,025	+		Sama_2681	0.24	+4.4
3,211,025	+		Sama_2681	0.24	+2.6
3,211,126	+		Sama_2681	0.33	-0.5
3,211,126	+		Sama_2681	0.33	-1.0
3,211,126	+		Sama_2681	0.33	-1.1
3,211,127	-		Sama_2681	0.33	-2.4
3,211,279	-		Sama_2681	0.46	+0.4
3,211,279	-		Sama_2681	0.46	-0.0
3,211,288	+		Sama_2681	0.47	+1.0
3,211,288	+		Sama_2681	0.47	-0.1
3,211,289	-		Sama_2681	0.47	+1.3
3,211,289	-		Sama_2681	0.47	-0.9
3,211,289	-		Sama_2681	0.47	+5.1
3,211,328	+		Sama_2681	0.50	+2.1
3,211,358	+		Sama_2681	0.53	-0.2
3,211,358	+		Sama_2681	0.53	-1.0
3,211,358	+		Sama_2681	0.53	+1.1
3,211,359	-		Sama_2681	0.53	+1.8
3,211,406	-		Sama_2681	0.57	+0.4
3,211,418	-		Sama_2681	0.58	+2.8
3,211,418	-		Sama_2681	0.58	-0.6
3,211,418	-		Sama_2681	0.58	+2.0
3,211,418	-		Sama_2681	0.58	-0.3
3,211,418	-		Sama_2681	0.58	+1.4
3,211,418	-		Sama_2681	0.58	-3.2
3,211,420	+		Sama_2681	0.58	+0.2
3,211,420	+		Sama_2681	0.58	-1.0
3,211,420	+		Sama_2681	0.58	-2.6
3,211,420	+		Sama_2681	0.58	+0.2
3,211,420	+		Sama_2681	0.58	-0.5
3,211,420	+		Sama_2681	0.58	+0.6
3,211,420	+		Sama_2681	0.58	-1.8
3,211,421	-		Sama_2681	0.58	-2.0
3,211,421	-		Sama_2681	0.58	+2.2
3,211,421	-		Sama_2681	0.58	-1.8