Strain Fitness in Shewanella amazonensis SB2B around Sama_2454

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
2,958,865	+		Sama_2453	0.63	-1.6
2,958,866	-		Sama_2453	0.63	+0.7
2,958,912	+		Sama_2453	0.65	-1.6
2,958,912	+		Sama_2453	0.65	-0.4
2,958,912	+		Sama_2453	0.65	+1.0
2,958,912	+		Sama_2453	0.65	-1.6
2,958,912	+		Sama_2453	0.65	-1.9
2,958,912	+		Sama_2453	0.65	+0.8
2,958,912	+		Sama_2453	0.65	-1.9
2,958,912	+		Sama_2453	0.65	-2.9
2,958,913	-		Sama_2453	0.65	+0.8
2,958,913	-		Sama_2453	0.65	-2.0
2,958,913	-		Sama_2453	0.65	+1.6
2,958,913	-		Sama_2453	0.65	-0.4
2,958,940	+		Sama_2453	0.66	+1.9
2,958,941	-		Sama_2453	0.66	-0.7
2,959,030	+		Sama_2453	0.70	-1.9
2,959,030	+		Sama_2453	0.70	+0.2
2,959,031	-		Sama_2453	0.70	-0.3
2,959,130	+		Sama_2453	0.74	-0.3
2,959,172	+		Sama_2453	0.75	+0.6
2,959,173	-		Sama_2453	0.75	+0.9
2,959,173	-		Sama_2453	0.75	-0.5
2,959,241	+		Sama_2453	0.78	-0.7
2,959,241	+		Sama_2453	0.78	+1.0
2,959,318	-		Sama_2453	0.81	-1.0
2,959,444	+		Sama_2453	0.86	-1.1
2,959,444	+		Sama_2453	0.86	+1.3
2,959,480	+		Sama_2453	0.87	-0.4
2,959,489	+		Sama_2453	0.88	-1.3
2,959,489	+		Sama_2453	0.88	-0.4
2,959,489	+		Sama_2453	0.88	-1.8
2,959,490	-		Sama_2453	0.88	+2.0
2,959,490	-		Sama_2453	0.88	+0.7
2,959,490	-		Sama_2453	0.88	-1.7
2,959,513	+		Sama_2453	0.89	-0.6
2,959,514	-		Sama_2453	0.89	-1.9
2,959,514	-		Sama_2453	0.89	-0.5
2,959,532	-		Sama_2453	0.90	+2.5
2,959,532	-		Sama_2453	0.90	+0.2
2,959,532	-		Sama_2453	0.90	-1.1
2,959,638	+				+1.8
2,959,683	-				-1.9
2,959,683	-				-3.1
2,959,697	+				+2.4
2,959,697	+				-2.6
2,959,698	-				+0.8
2,959,698	-				-1.7
2,959,723	+				-1.4
2,959,723	+				+1.5
2,959,723	+				+1.3
2,959,723	+				+1.9
2,959,724	-				-1.7
2,959,724	-				-0.5
2,959,724	-				+4.6
2,959,724	-				+2.5
2,959,724	-				+1.5
2,959,888	-				-2.6
2,960,042	+				+1.9
2,960,043	-				+0.4
2,960,124	+		Sama_2454	0.13	-0.2
2,960,125	-		Sama_2454	0.13	+0.3
2,960,125	-		Sama_2454	0.13	-0.1
2,960,125	-		Sama_2454	0.13	-0.6
2,960,156	+		Sama_2454	0.14	-2.2
2,960,157	-		Sama_2454	0.14	+3.0
2,960,157	-		Sama_2454	0.14	-1.7
2,960,172	-		Sama_2454	0.15	-0.2
2,960,183	+		Sama_2454	0.15	-0.2
2,960,183	+		Sama_2454	0.15	+0.5
2,960,184	-		Sama_2454	0.15	-0.4
2,960,197	-		Sama_2454	0.16	+0.5
2,960,198	+		Sama_2454	0.16	-2.4
2,960,198	+		Sama_2454	0.16	+0.6
2,960,198	+		Sama_2454	0.16	-0.0
2,960,198	+		Sama_2454	0.16	+0.5
2,960,198	+		Sama_2454	0.16	+1.0
2,960,198	+		Sama_2454	0.16	-0.9
2,960,199	-		Sama_2454	0.16	+0.6
2,960,199	-		Sama_2454	0.16	-0.7
2,960,199	-		Sama_2454	0.16	-1.5
2,960,199	-		Sama_2454	0.16	+1.2
2,960,220	+		Sama_2454	0.17	+1.1
2,960,221	-		Sama_2454	0.17	-1.9
2,960,486	-		Sama_2454	0.29	-1.7
2,960,490	+		Sama_2454	0.29	+0.6
2,960,490	+		Sama_2454	0.29	+1.7
2,960,491	-		Sama_2454	0.29	+0.5
2,960,629	+		Sama_2454	0.35	-0.9
2,960,629	+		Sama_2454	0.35	-0.6
2,960,630	-		Sama_2454	0.35	-3.4
2,960,632	+		Sama_2454	0.35	-1.0
2,960,632	+		Sama_2454	0.35	-1.2
2,960,632	+		Sama_2454	0.35	-1.9
2,960,632	+		Sama_2454	0.35	-0.1
2,960,632	+		Sama_2454	0.35	+0.0
2,960,633	-		Sama_2454	0.35	-4.2
2,960,633	-		Sama_2454	0.35	+1.8
2,960,633	-		Sama_2454	0.35	+1.4
2,960,633	-		Sama_2454	0.35	+0.9
2,960,634	+		Sama_2454	0.35	-0.1
2,960,639	-		Sama_2454	0.36	+1.7
2,960,737	+		Sama_2454	0.40	-1.1
2,960,737	+		Sama_2454	0.40	+2.5
2,960,747	+		Sama_2454	0.41	-1.3
2,960,747	+		Sama_2454	0.41	+2.2
2,960,747	+		Sama_2454	0.41	-2.2
2,960,748	-		Sama_2454	0.41	+1.1
2,960,748	-		Sama_2454	0.41	+0.6
2,960,748	-		Sama_2454	0.41	-1.3
2,960,757	+		Sama_2454	0.41	-1.5
2,960,856	-		Sama_2454	0.45	-0.8
2,961,073	-		Sama_2454	0.55	-0.9
2,961,073	-		Sama_2454	0.55	+2.0
2,961,088	-		Sama_2454	0.56	+0.6
2,961,088	-		Sama_2454	0.56	-0.3
2,961,088	-		Sama_2454	0.56	-1.1
2,961,088	-		Sama_2454	0.56	-0.5
2,961,212	-		Sama_2454	0.61	+3.6
2,961,263	+		Sama_2454	0.64	+0.6
2,961,264	-		Sama_2454	0.64	+4.6
2,961,264	-		Sama_2454	0.64	+1.8
2,961,264	-		Sama_2454	0.64	+3.2
2,961,264	-		Sama_2454	0.64	-2.0
2,961,264	-		Sama_2454	0.64	+1.6
2,961,316	+		Sama_2454	0.66	-1.1
2,961,341	+		Sama_2454	0.67	-0.7
2,961,343	+		Sama_2454	0.67	-2.6
2,961,343	+		Sama_2454	0.67	+1.1
2,961,343	+		Sama_2454	0.67	+0.7
2,961,343	+		Sama_2454	0.67	-1.6
2,961,343	+		Sama_2454	0.67	-1.5
2,961,343	+		Sama_2454	0.67	+0.3
2,961,344	-		Sama_2454	0.67	-0.1
2,961,344	-		Sama_2454	0.67	-2.3
2,961,344	-		Sama_2454	0.67	-1.1
2,961,379	+		Sama_2454	0.69	-0.2
2,961,468	+		Sama_2454	0.73	-3.3
2,961,469	-		Sama_2454	0.73	-2.1
2,961,469	-		Sama_2454	0.73	-0.9
2,961,528	-		Sama_2454	0.76	+2.9
2,961,528	-		Sama_2454	0.76	+0.3
2,961,537	+		Sama_2454	0.76	-1.4
2,961,537	+		Sama_2454	0.76	-0.8
2,961,584	-		Sama_2454	0.78	+1.0
2,961,584	-		Sama_2454	0.78	+0.8
2,961,685	+		Sama_2454	0.83	+1.0
2,961,686	-		Sama_2454	0.83	-0.6
2,961,686	-		Sama_2454	0.83	-1.2
2,961,700	+		Sama_2454	0.83	-0.7
2,961,701	-		Sama_2454	0.83	+0.5
2,961,701	-		Sama_2454	0.83	+1.6
2,961,721	+		Sama_2454	0.84	+0.5
2,961,721	+		Sama_2454	0.84	-1.4
2,961,765	+		Sama_2454	0.86	-0.5
2,961,766	-		Sama_2454	0.86	+0.7
2,961,766	-		Sama_2454	0.86	-1.6
2,961,766	-		Sama_2454	0.86	+1.7
2,961,795	+		Sama_2454	0.88	-2.1
2,961,795	+		Sama_2454	0.88	+2.3
2,961,884	+				+0.6
2,961,885	-				-1.3
2,961,885	-				+1.0
2,961,885	-				-1.5
2,961,997	-				+1.2
2,962,052	-				-1.6
2,962,097	-				+3.2
2,962,097	-				-0.2
2,962,097	-				-0.4
2,962,097	-				+1.3
2,962,282	-				-2.0
2,962,328	+				+0.0
2,962,347	+				+2.5
2,962,347	+				-0.3
2,962,347	+				+3.3
2,962,348	-				-2.7
2,962,411	+				+0.5
2,962,411	+				-2.1
2,962,411	+				-1.2
2,962,412	-				-0.6
2,962,412	-				+2.8
2,962,414	+				-0.3
2,962,414	+				-1.4
2,962,414	+				+0.7
2,962,415	-				-1.2
2,962,447	+				+0.0
2,962,447	+				-1.5
2,962,448	-				+4.0
2,962,448	-				+3.0
2,962,451	+				+0.8
2,962,451	+				-0.2
2,962,451	+				+0.8
2,962,451	+				-1.1
2,962,451	+				-0.8
2,962,451	+				-0.8
2,962,452	-				-0.1
2,962,452	-				-1.2
2,962,452	-				-0.9
2,962,452	-				+0.5
2,962,454	+				+1.2
2,962,454	+				+0.1
2,962,454	+				-1.9
2,962,455	-				+0.6
2,962,528	+				+5.0
2,962,528	+				-1.7
2,962,528	+				+0.8
2,962,528	+				-0.8
2,962,528	+				-0.7
2,962,529	-				+2.7
2,962,529	-				+0.6
2,962,545	-				+0.6
2,962,568	+				+0.2
2,962,580	-		Sama_2455	0.11	-0.0
2,962,585	+		Sama_2455	0.11	-2.2
2,962,585	+		Sama_2455	0.11	+5.3
2,962,585	+		Sama_2455	0.11	+1.1
2,962,586	-		Sama_2455	0.11	-1.5
2,962,586	-		Sama_2455	0.11	+0.9
2,962,589	+		Sama_2455	0.12	-0.8
2,962,589	+		Sama_2455	0.12	+2.4
2,962,589	+		Sama_2455	0.12	+4.9
2,962,589	+		Sama_2455	0.12	+0.6
2,962,589	+		Sama_2455	0.12	-2.5
2,962,590	-		Sama_2455	0.12	+2.3
2,962,590	-		Sama_2455	0.12	+1.2
2,962,590	-		Sama_2455	0.12	-0.9
2,962,590	-		Sama_2455	0.12	+0.3
2,962,629	-		Sama_2455	0.15	-3.0
2,962,654	+		Sama_2455	0.17	-0.8
2,962,655	-		Sama_2455	0.17	-0.3
2,962,809	+		Sama_2455	0.31	-0.6
2,962,823	+		Sama_2455	0.32	+1.0
2,962,823	+		Sama_2455	0.32	-1.1
2,962,862	+		Sama_2455	0.35	-1.7
2,962,862	+		Sama_2455	0.35	-0.1
2,962,862	+		Sama_2455	0.35	+2.3
2,962,862	+		Sama_2455	0.35	-1.5
2,962,863	-		Sama_2455	0.36	-0.0
2,962,863	-		Sama_2455	0.36	+1.8
2,962,863	-		Sama_2455	0.36	-1.6
2,962,863	-		Sama_2455	0.36	+1.6
2,962,863	-		Sama_2455	0.36	-0.8
2,962,863	-		Sama_2455	0.36	-1.1
2,962,865	+		Sama_2455	0.36	-3.7
2,962,866	-		Sama_2455	0.36	+4.1
2,962,866	-		Sama_2455	0.36	+2.2
2,962,925	+		Sama_2455	0.41	-2.8
2,962,928	+		Sama_2455	0.41	+2.7
2,962,928	+		Sama_2455	0.41	+4.2
2,962,928	+		Sama_2455	0.41	+2.2
2,962,928	+		Sama_2455	0.41	+1.9
2,962,928	+		Sama_2455	0.41	-0.1
2,962,928	+		Sama_2455	0.41	-0.1
2,962,928	+		Sama_2455	0.41	-2.4
2,962,929	-		Sama_2455	0.41	-0.9
2,962,929	-		Sama_2455	0.41	+2.9
2,962,929	-		Sama_2455	0.41	-1.1
2,962,929	-		Sama_2455	0.41	+0.4
2,963,058	+		Sama_2455	0.52	+3.3
2,963,058	+		Sama_2455	0.52	-0.1
2,963,058	+		Sama_2455	0.52	+2.4
2,963,058	+		Sama_2455	0.52	-0.6
2,963,058	+		Sama_2455	0.52	-0.8
2,963,058	+		Sama_2455	0.52	+2.8
2,963,058	+		Sama_2455	0.52	+0.2
2,963,059	-		Sama_2455	0.53	-1.1
2,963,059	-		Sama_2455	0.53	+0.4
2,963,059	-		Sama_2455	0.53	+1.9
2,963,059	-		Sama_2455	0.53	-0.5
2,963,059	-		Sama_2455	0.53	+0.3
2,963,059	-		Sama_2455	0.53	-0.5
2,963,059	-		Sama_2455	0.53	+0.1
2,963,059	-		Sama_2455	0.53	+1.0
2,963,059	-		Sama_2455	0.53	-0.8
2,963,059	-		Sama_2455	0.53	+0.5
2,963,059	-		Sama_2455	0.53	+2.4
2,963,059	-		Sama_2455	0.53	-1.3
2,963,059	-		Sama_2455	0.53	+1.6
2,963,059	-		Sama_2455	0.53	+1.0