Strain Fitness in Shewanella amazonensis SB2B around Sama_2196

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
2,653,742	+				-0.2
2,653,742	+				+1.2
2,653,743	-				-0.1
2,653,743	-				+4.2
2,653,743	-				+2.4
2,653,754	+				+1.1
2,653,755	-				-0.8
2,653,769	+				-0.3
2,653,769	+				-0.4
2,653,839	+				-1.4
2,653,839	+				+1.6
2,653,891	+				-0.4
2,653,891	+				+1.2
2,653,891	+				-2.0
2,653,891	+				+2.6
2,653,909	+				-0.2
2,653,909	+				-1.0
2,653,909	+				-1.0
2,653,909	+				-2.3
2,653,909	+				+1.5
2,653,927	+				+0.3
2,653,945	+				+2.6
2,653,945	+				+1.9
2,653,945	+				-2.0
2,654,003	-				-0.6
2,654,003	-				+1.1
2,654,037	+				-1.0
2,654,037	+				-0.6
2,654,038	-				+0.5
2,654,072	+				-1.9
2,654,072	+				-1.1
2,654,073	-				+1.6
2,654,076	-				-1.3
2,654,107	+				+1.0
2,654,107	+				+1.0
2,654,108	-				-1.0
2,654,141	+				-2.6
2,654,174	+				-1.2
2,654,175	-				+2.0
2,654,344	+		Sama_2195	0.34	-0.1
2,654,345	-		Sama_2195	0.34	-1.0
2,654,345	-		Sama_2195	0.34	-0.7
2,654,362	+		Sama_2195	0.37	-0.3
2,654,363	-		Sama_2195	0.37	-0.9
2,654,363	-		Sama_2195	0.37	+2.6
2,654,375	-		Sama_2195	0.39	+1.1
2,654,412	+		Sama_2195	0.45	-1.1
2,654,413	-		Sama_2195	0.46	-2.9
2,654,413	-		Sama_2195	0.46	-1.7
2,654,432	+		Sama_2195	0.49	-1.1
2,654,433	-		Sama_2195	0.49	-0.8
2,654,451	+		Sama_2195	0.52	-3.4
2,654,466	-		Sama_2195	0.55	+0.3
2,654,466	-		Sama_2195	0.55	-0.8
2,654,538	+		Sama_2195	0.67	-1.7
2,654,538	+		Sama_2195	0.67	+2.8
2,654,538	+		Sama_2195	0.67	-1.2
2,654,692	-				-1.0
2,654,727	+				-1.7
2,654,728	-				-0.9
2,654,728	-				-0.1
2,654,728	-				+3.8
2,654,734	-				+2.5
2,654,734	-				+0.7
2,654,763	-				+2.8
2,654,795	-		Sama_2196	0.12	+2.0
2,654,798	+		Sama_2196	0.12	+1.8
2,654,798	+		Sama_2196	0.12	+1.3
2,654,798	+		Sama_2196	0.12	+0.2
2,654,799	-		Sama_2196	0.12	-1.0
2,654,827	-		Sama_2196	0.18	-2.0
2,654,840	+		Sama_2196	0.20	+1.6
2,654,840	+		Sama_2196	0.20	+2.3
2,654,840	+		Sama_2196	0.20	-1.9
2,654,919	-		Sama_2196	0.36	-0.4
2,654,992	+		Sama_2196	0.50	+2.9
2,654,993	-		Sama_2196	0.50	+1.2
2,655,041	+		Sama_2196	0.59	+1.8
2,655,042	-		Sama_2196	0.60	-2.6
2,655,053	-		Sama_2196	0.62	-0.1
2,655,053	-		Sama_2196	0.62	+3.2
2,655,110	+		Sama_2196	0.73	+3.0
2,655,110	+		Sama_2196	0.73	-1.6
2,655,110	+		Sama_2196	0.73	-1.9
2,655,110	+		Sama_2196	0.73	+2.0
2,655,110	+		Sama_2196	0.73	+2.0
2,655,110	+		Sama_2196	0.73	+0.4
2,655,111	-		Sama_2196	0.73	+4.3
2,655,147	+		Sama_2196	0.80	-3.6
2,655,147	+		Sama_2196	0.80	+2.3
2,655,148	-		Sama_2196	0.80	-1.0
2,655,148	-		Sama_2196	0.80	-0.8
2,655,148	-		Sama_2196	0.80	+0.6
2,655,148	-		Sama_2196	0.80	-0.8
2,655,148	-		Sama_2196	0.80	-0.0
2,655,148	-		Sama_2196	0.80	-2.3
2,655,148	-		Sama_2196	0.80	-0.0
2,655,263	+				-2.4
2,655,263	+				-1.7
2,655,361	+				+1.4
2,655,361	+				-1.5
2,655,361	+				-0.4
2,655,362	-				-1.7
2,655,362	-				+0.2
2,655,362	-				+2.7
2,655,391	-		Sama_2197	0.12	-0.8
2,655,406	+		Sama_2197	0.14	-1.2
2,655,450	+		Sama_2197	0.21	-1.0
2,655,482	+		Sama_2197	0.25	-1.9
2,655,482	+		Sama_2197	0.25	+1.2
2,655,483	-		Sama_2197	0.26	+0.7
2,655,483	-		Sama_2197	0.26	-2.3
2,655,595	+		Sama_2197	0.42	+1.8
2,655,595	+		Sama_2197	0.42	+0.0
2,655,600	-		Sama_2197	0.43	-1.6
2,655,642	-		Sama_2197	0.49	-1.4
2,655,798	-		Sama_2197	0.72	-0.8
2,655,803	+		Sama_2197	0.73	-1.3
2,655,804	-		Sama_2197	0.73	+0.7
2,655,807	+		Sama_2197	0.74	-1.1
2,655,807	+		Sama_2197	0.74	-0.5
2,655,807	+		Sama_2197	0.74	-2.1
2,655,807	+		Sama_2197	0.74	+2.8
2,655,807	+		Sama_2197	0.74	-0.0
2,655,807	+		Sama_2197	0.74	+0.4
2,655,807	+		Sama_2197	0.74	-1.1
2,655,807	+		Sama_2197	0.74	-1.1
2,655,807	+		Sama_2197	0.74	-2.1
2,655,807	+		Sama_2197	0.74	-2.3
2,655,807	+		Sama_2197	0.74	+1.4
2,655,807	+		Sama_2197	0.74	+0.4
2,655,807	+		Sama_2197	0.74	-1.8
2,655,807	+		Sama_2197	0.74	-1.1
2,655,807	+		Sama_2197	0.74	-0.2
2,655,807	+		Sama_2197	0.74	-1.8
2,655,807	+		Sama_2197	0.74	+0.3
2,655,807	+		Sama_2197	0.74	+2.0
2,655,807	+		Sama_2197	0.74	-1.7
2,655,807	+		Sama_2197	0.74	+3.7
2,655,807	+		Sama_2197	0.74	-0.9
2,655,807	+		Sama_2197	0.74	-1.7
2,655,808	-		Sama_2197	0.74	-1.2
2,655,808	-		Sama_2197	0.74	+0.9
2,655,808	-		Sama_2197	0.74	-0.9
2,655,808	-		Sama_2197	0.74	+2.5
2,655,808	-		Sama_2197	0.74	-1.1
2,655,808	-		Sama_2197	0.74	-1.1
2,655,808	-		Sama_2197	0.74	+5.5
2,655,808	-		Sama_2197	0.74	+0.8
2,655,808	-		Sama_2197	0.74	-1.5
2,655,808	-		Sama_2197	0.74	+0.4
2,655,808	-		Sama_2197	0.74	-1.7
2,655,847	+		Sama_2197	0.80	+1.3
2,655,847	+		Sama_2197	0.80	-0.7
2,655,848	-		Sama_2197	0.80	-0.9
2,655,930	+				+0.5
2,655,931	-				-1.4
2,655,982	+				-2.0
2,655,992	+				+1.3
2,656,042	+				-0.1
2,656,043	-				-1.5
2,656,143	-		Sama_2198	0.33	+3.7
2,656,228	+		Sama_2198	0.53	-0.4
2,656,229	-		Sama_2198	0.54	+2.8
2,656,229	-		Sama_2198	0.54	-0.9
2,656,241	+		Sama_2198	0.57	-0.6
2,656,242	-		Sama_2198	0.57	+2.4