Strain Fitness in Shewanella amazonensis SB2B around Sama_0573

Experiment: L-Histidine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Histidine (N)
712,800	-		Sama_0572	0.59	-1.1
712,835	+		Sama_0572	0.61	+1.3
712,835	+		Sama_0572	0.61	-1.8
712,835	+		Sama_0572	0.61	+0.5
712,836	-		Sama_0572	0.61	-0.4
712,884	+		Sama_0572	0.63	-1.4
712,884	+		Sama_0572	0.63	-2.4
712,884	+		Sama_0572	0.63	-0.9
712,884	+		Sama_0572	0.63	-0.4
712,884	+		Sama_0572	0.63	-1.5
712,884	+		Sama_0572	0.63	-0.4
712,884	+		Sama_0572	0.63	+1.5
712,884	+		Sama_0572	0.63	-2.0
712,884	+		Sama_0572	0.63	-1.4
712,884	+		Sama_0572	0.63	+0.6
712,884	+		Sama_0572	0.63	-1.0
712,884	+		Sama_0572	0.63	-1.0
712,884	+		Sama_0572	0.63	-0.2
712,884	+		Sama_0572	0.63	-0.4
712,885	-		Sama_0572	0.63	+0.7
712,888	+		Sama_0572	0.63	+1.1
712,888	+		Sama_0572	0.63	-3.6
712,888	+		Sama_0572	0.63	+1.3
712,888	+		Sama_0572	0.63	-0.5
712,889	-		Sama_0572	0.63	+0.7
712,889	-		Sama_0572	0.63	-0.1
712,889	-		Sama_0572	0.63	+0.4
712,889	-		Sama_0572	0.63	-1.9
712,889	-		Sama_0572	0.63	+0.8
712,889	-		Sama_0572	0.63	-1.4
712,906	+		Sama_0572	0.64	+1.0
712,906	+		Sama_0572	0.64	-0.2
712,906	+		Sama_0572	0.64	+0.9
712,906	+		Sama_0572	0.64	+0.2
712,906	+		Sama_0572	0.64	-1.6
712,907	-		Sama_0572	0.64	+4.8
712,907	-		Sama_0572	0.64	-0.2
712,907	-		Sama_0572	0.64	+1.5
712,907	-		Sama_0572	0.64	-1.6
712,998	+		Sama_0572	0.67	-0.5
713,010	+		Sama_0572	0.68	+3.0
713,011	-		Sama_0572	0.68	+0.4
713,039	+		Sama_0572	0.69	-0.5
713,121	-		Sama_0572	0.72	-1.9
713,121	-		Sama_0572	0.72	+2.4
713,139	+		Sama_0572	0.73	+3.0
713,140	-		Sama_0572	0.73	-2.2
713,140	-		Sama_0572	0.73	+3.3
713,140	-		Sama_0572	0.73	-0.5
713,148	+		Sama_0572	0.74	-0.9
713,169	+		Sama_0572	0.74	+1.2
713,169	+		Sama_0572	0.74	-0.9
713,169	+		Sama_0572	0.74	+0.8
713,185	+		Sama_0572	0.75	+1.4
713,185	+		Sama_0572	0.75	-0.5
713,185	+		Sama_0572	0.75	+0.2
713,185	+		Sama_0572	0.75	+1.4
713,185	+		Sama_0572	0.75	+0.8
713,185	+		Sama_0572	0.75	+0.7
713,185	+		Sama_0572	0.75	-1.5
713,185	+		Sama_0572	0.75	-1.0
713,185	+		Sama_0572	0.75	-1.0
713,185	+		Sama_0572	0.75	+0.2
713,186	-		Sama_0572	0.75	-1.6
713,186	-		Sama_0572	0.75	-1.1
713,186	-		Sama_0572	0.75	-1.3
713,186	-		Sama_0572	0.75	+5.0
713,186	-		Sama_0572	0.75	+0.7
713,186	-		Sama_0572	0.75	-1.3
713,186	-		Sama_0572	0.75	-2.2
713,186	-		Sama_0572	0.75	+0.5
713,186	-		Sama_0572	0.75	-0.5
713,186	-		Sama_0572	0.75	-2.1
713,186	-		Sama_0572	0.75	-1.3
713,186	-		Sama_0572	0.75	-1.0
713,186	-		Sama_0572	0.75	+3.7
713,186	-		Sama_0572	0.75	-0.9
713,186	-		Sama_0572	0.75	+0.5
713,186	-		Sama_0572	0.75	-1.6
713,214	+		Sama_0572	0.76	-0.8
713,214	+		Sama_0572	0.76	-2.0
713,248	+		Sama_0572	0.78	-1.2
713,248	+		Sama_0572	0.78	-0.3
713,248	+		Sama_0572	0.78	-1.8
713,248	+		Sama_0572	0.78	-3.4
713,248	+		Sama_0572	0.78	+0.4
713,248	+		Sama_0572	0.78	-2.8
713,248	+		Sama_0572	0.78	+0.5
713,248	+		Sama_0572	0.78	-2.6
713,248	+		Sama_0572	0.78	-0.3
713,249	-		Sama_0572	0.78	-0.1
713,249	-		Sama_0572	0.78	+0.1
713,249	-		Sama_0572	0.78	-0.0
713,249	-		Sama_0572	0.78	-0.1
713,249	-		Sama_0572	0.78	+1.1
713,249	-		Sama_0572	0.78	-0.5
713,278	+		Sama_0572	0.79	-1.0
713,294	+		Sama_0572	0.79	-1.8
713,295	-		Sama_0572	0.79	+0.1
713,310	+		Sama_0572	0.80	+0.0
713,315	+		Sama_0572	0.80	+0.9
713,331	+		Sama_0572	0.81	-1.3
713,360	+		Sama_0572	0.82	-1.8
713,361	-		Sama_0572	0.82	+1.7
713,376	+		Sama_0572	0.83	+0.5
713,376	+		Sama_0572	0.83	+0.6
713,376	+		Sama_0572	0.83	-1.0
713,376	+		Sama_0572	0.83	+0.4
713,377	-		Sama_0572	0.83	-0.7
713,377	-		Sama_0572	0.83	-0.1
713,377	-		Sama_0572	0.83	-1.5
713,387	+		Sama_0572	0.83	-0.5
713,388	-		Sama_0572	0.83	-2.5
713,388	-		Sama_0572	0.83	+1.2
713,388	-		Sama_0572	0.83	+0.3
713,388	-		Sama_0572	0.83	+0.9
713,388	-		Sama_0572	0.83	-0.1
713,388	-		Sama_0572	0.83	+0.9
713,388	-		Sama_0572	0.83	+0.3
713,442	+		Sama_0572	0.85	+0.2
713,442	+		Sama_0572	0.85	-0.6
713,442	+		Sama_0572	0.85	-2.8
713,443	-		Sama_0572	0.85	-1.2
713,443	-		Sama_0572	0.85	+0.1
713,443	-		Sama_0572	0.85	-2.1
713,443	-		Sama_0572	0.85	-0.7
713,443	-		Sama_0572	0.85	+1.7
713,464	+		Sama_0572	0.86	-1.5
713,479	+		Sama_0572	0.87	-1.9
713,480	-		Sama_0572	0.87	-0.8
713,504	+		Sama_0572	0.88	-2.7
713,505	-		Sama_0572	0.88	-0.1
713,564	+				-0.5
713,564	+				-2.3
713,564	+				+0.1
713,564	+				-2.0
713,564	+				+2.3
713,564	+				+0.7
713,565	-				+1.1
713,565	-				-1.1
713,565	-				+1.2
713,576	+				+2.0
713,576	+				+0.9
713,576	+				+0.7
713,576	+				+0.3
713,577	-				-0.7
713,579	+				-1.3
713,579	+				-1.5
713,580	-				-0.8
713,580	-				-3.3
713,580	-				+1.3
713,601	+				-0.5
713,637	-				-1.3
713,637	-				-2.0
713,683	+				+0.6
713,683	+				+0.9
713,684	-				-0.8
713,684	-				-1.9
713,684	-				-2.6
713,684	-				+0.9
713,687	+				-1.0
713,739	+				+2.1
713,739	+				+1.2
713,739	+				-0.0
713,739	+				-2.6
713,739	+				-2.8
713,740	-				-2.1
713,952	+		Sama_0573	0.10	-1.2
713,994	-		Sama_0573	0.13	-0.8
713,999	+		Sama_0573	0.14	+1.7
713,999	+		Sama_0573	0.14	-2.2
713,999	+		Sama_0573	0.14	-1.7
713,999	+		Sama_0573	0.14	-0.7
714,000	-		Sama_0573	0.14	-0.4
714,000	-		Sama_0573	0.14	+0.9
714,003	+		Sama_0573	0.14	+0.2
714,003	+		Sama_0573	0.14	-0.6
714,004	-		Sama_0573	0.14	-1.5
714,004	-		Sama_0573	0.14	-1.8
714,084	+		Sama_0573	0.19	+0.4
714,084	+		Sama_0573	0.19	-0.1
714,084	+		Sama_0573	0.19	+0.8
714,085	-		Sama_0573	0.19	+3.9
714,085	-		Sama_0573	0.19	-2.2
714,085	-		Sama_0573	0.19	-1.9
714,085	-		Sama_0573	0.19	-1.9
714,129	-		Sama_0573	0.22	-0.0
714,130	+		Sama_0573	0.22	-0.7
714,130	+		Sama_0573	0.22	+1.6
714,130	+		Sama_0573	0.22	-2.4
714,130	+		Sama_0573	0.22	+2.6
714,131	-		Sama_0573	0.22	+0.4
714,131	-		Sama_0573	0.22	-2.6
714,131	-		Sama_0573	0.22	+0.0
714,131	-		Sama_0573	0.22	-1.3
714,131	-		Sama_0573	0.22	-2.2
714,149	+		Sama_0573	0.24	+0.1
714,149	+		Sama_0573	0.24	-2.7
714,156	+		Sama_0573	0.24	-2.6
714,157	-		Sama_0573	0.24	+1.1
714,169	-		Sama_0573	0.25	-2.5
714,282	-		Sama_0573	0.33	-0.5
714,343	+		Sama_0573	0.37	-2.3
714,344	-		Sama_0573	0.37	-2.4
714,344	-		Sama_0573	0.37	-2.7
714,344	-		Sama_0573	0.37	+2.3
714,344	-		Sama_0573	0.37	-1.9
714,344	-		Sama_0573	0.37	-1.8
714,344	-		Sama_0573	0.37	-0.3
714,392	+		Sama_0573	0.40	-2.6
714,392	+		Sama_0573	0.40	-2.2
714,393	-		Sama_0573	0.40	-0.8
714,486	+		Sama_0573	0.46	-1.3
714,486	+		Sama_0573	0.46	-1.4
714,486	+		Sama_0573	0.46	-2.6
714,486	+		Sama_0573	0.46	-1.6
714,486	+		Sama_0573	0.46	-1.5
714,486	+		Sama_0573	0.46	+1.0
714,487	-		Sama_0573	0.47	-1.6
714,487	-		Sama_0573	0.47	-1.3
714,487	-		Sama_0573	0.47	-0.6
714,487	-		Sama_0573	0.47	-0.8
714,487	-		Sama_0573	0.47	+0.7
714,487	-		Sama_0573	0.47	-1.7
714,487	-		Sama_0573	0.47	-0.7
714,614	+		Sama_0573	0.55	-0.5
714,614	+		Sama_0573	0.55	-3.3
714,614	+		Sama_0573	0.55	-2.5
714,614	+		Sama_0573	0.55	-0.3
714,614	+		Sama_0573	0.55	-1.0
714,615	-		Sama_0573	0.55	-3.3
714,618	+		Sama_0573	0.55	-1.7
714,618	+		Sama_0573	0.55	-0.5
714,618	+		Sama_0573	0.55	-0.6
714,618	+		Sama_0573	0.55	-0.3
714,618	+		Sama_0573	0.55	-1.4
714,618	+		Sama_0573	0.55	-1.4
714,618	+		Sama_0573	0.55	-1.7
714,619	-		Sama_0573	0.55	-1.7
714,619	-		Sama_0573	0.55	+0.6
714,619	-		Sama_0573	0.55	-1.9
714,671	+		Sama_0573	0.59	-2.7
714,672	-		Sama_0573	0.59	-2.5
714,709	+		Sama_0573	0.62	-1.4
714,709	+		Sama_0573	0.62	-1.7
714,709	+		Sama_0573	0.62	+0.1
714,752	-		Sama_0573	0.64	-0.3
714,807	+		Sama_0573	0.68	+1.0
714,870	+		Sama_0573	0.72	-2.2
714,901	-		Sama_0573	0.75	-0.0
714,975	-		Sama_0573	0.80	-1.3
714,976	+		Sama_0573	0.80	-1.7
714,976	+		Sama_0573	0.80	-1.1
714,976	+		Sama_0573	0.80	-0.2
714,976	+		Sama_0573	0.80	-1.7
714,976	+		Sama_0573	0.80	+0.1
714,976	+		Sama_0573	0.80	-1.9
714,976	+		Sama_0573	0.80	+0.2
714,977	-		Sama_0573	0.80	-0.1
714,977	-		Sama_0573	0.80	-1.8
714,977	-		Sama_0573	0.80	-1.1
714,977	-		Sama_0573	0.80	-1.2
714,977	-		Sama_0573	0.80	+0.4
715,030	+		Sama_0573	0.83	-0.1
715,052	-		Sama_0573	0.85	-0.1
715,074	+		Sama_0573	0.86	-1.1
715,129	+		Sama_0573	0.90	-2.2
715,130	-				-1.0
715,130	-				-1.3
715,130	-				-2.2
715,130	-				-0.1
715,147	+				+1.7
715,147	+				-0.8
715,147	+				-1.1
715,208	+				-1.5
715,264	-				-1.6
715,277	+				+0.2
715,277	+				-3.3
715,277	+				+1.3
715,277	+				-1.4
715,277	+				-1.9
715,277	+				-2.3
715,278	-				+0.6
715,399	+				-1.0
715,400	-				-0.8
715,538	+		Sama_0574	0.23	-0.5
715,539	-		Sama_0574	0.23	-2.8
715,539	-		Sama_0574	0.23	-0.7
715,564	+		Sama_0574	0.26	-2.3
715,606	-		Sama_0574	0.30	-3.3
715,606	-		Sama_0574	0.30	-1.2
715,636	+		Sama_0574	0.34	-0.8
715,636	+		Sama_0574	0.34	-2.0
715,636	+		Sama_0574	0.34	-1.9
715,636	+		Sama_0574	0.34	-1.0
715,637	-		Sama_0574	0.34	-0.3
715,637	-		Sama_0574	0.34	-2.2
715,637	-		Sama_0574	0.34	-2.9
715,637	-		Sama_0574	0.34	-1.1
715,666	+		Sama_0574	0.37	-1.6
715,686	+		Sama_0574	0.39	-2.4
715,686	+		Sama_0574	0.39	-1.8
715,693	+		Sama_0574	0.40	-1.1
715,693	+		Sama_0574	0.40	-1.0
715,694	-		Sama_0574	0.40	-1.9
715,694	-		Sama_0574	0.40	-2.5
715,715	+		Sama_0574	0.42	-0.1
715,715	+		Sama_0574	0.42	-1.2
715,715	+		Sama_0574	0.42	-1.5
715,716	-		Sama_0574	0.42	-3.3
715,716	-		Sama_0574	0.42	-0.7
715,759	+		Sama_0574	0.47	-2.4
715,759	+		Sama_0574	0.47	-1.9
715,796	-		Sama_0574	0.50	-1.5
715,796	-		Sama_0574	0.50	-3.1
715,864	+		Sama_0574	0.58	-1.7
715,886	-		Sama_0574	0.60	-0.3
715,886	-		Sama_0574	0.60	-0.5
715,966	+		Sama_0574	0.68	-2.6
715,966	+		Sama_0574	0.68	-1.4
715,966	+		Sama_0574	0.68	-2.1
715,966	+		Sama_0574	0.68	-2.2
715,966	+		Sama_0574	0.68	-1.8
715,966	+		Sama_0574	0.68	-2.2
715,966	+		Sama_0574	0.68	-1.4
715,967	-		Sama_0574	0.68	+1.0
715,967	-		Sama_0574	0.68	-2.5
715,967	-		Sama_0574	0.68	-0.3
715,967	-		Sama_0574	0.68	-2.6
715,967	-		Sama_0574	0.68	-3.7
715,968	+		Sama_0574	0.69	-2.3
715,968	+		Sama_0574	0.69	-2.2
715,968	+		Sama_0574	0.69	-2.4
715,968	+		Sama_0574	0.69	-2.0
715,968	+		Sama_0574	0.69	-2.5
715,968	+		Sama_0574	0.69	-2.0
715,968	+		Sama_0574	0.69	-2.1
715,968	+		Sama_0574	0.69	-1.3
715,969	-		Sama_0574	0.69	-2.4
715,969	-		Sama_0574	0.69	-1.2
715,969	-		Sama_0574	0.69	-1.0
715,969	-		Sama_0574	0.69	-2.1
715,969	-		Sama_0574	0.69	-3.2
715,969	-		Sama_0574	0.69	-1.1
715,978	-		Sama_0574	0.70	-2.0
715,978	-		Sama_0574	0.70	-2.1
715,981	+		Sama_0574	0.70	-2.5
715,981	+		Sama_0574	0.70	+0.5
715,982	-		Sama_0574	0.70	-0.7
715,982	-		Sama_0574	0.70	-1.1
715,983	+		Sama_0574	0.70	-0.1
715,984	-		Sama_0574	0.70	-0.0
716,008	+		Sama_0574	0.73	-1.5
716,008	+		Sama_0574	0.73	-0.8
716,091	-		Sama_0574	0.81	-1.8
716,091	-		Sama_0574	0.81	-3.4
716,091	-		Sama_0574	0.81	-1.0
716,091	-		Sama_0574	0.81	-1.7
716,091	-		Sama_0574	0.81	-2.2
716,155	+		Sama_0574	0.88	-0.7
716,155	+		Sama_0574	0.88	-1.2
716,157	+		Sama_0574	0.88	+1.4
716,157	+		Sama_0574	0.88	-1.2
716,157	+		Sama_0574	0.88	-1.0
716,157	+		Sama_0574	0.88	-2.3
716,158	-		Sama_0574	0.89	-1.2
716,158	-		Sama_0574	0.89	-0.7
716,158	-		Sama_0574	0.89	-1.9
716,169	+		Sama_0574	0.90	-0.1
716,170	-		Sama_0574	0.90	-1.7
716,249	+				-0.8
716,266	+				-2.0
716,266	+				-1.4
716,266	+				-0.6
716,267	-				+1.6
716,267	-				-1.0
716,267	-				+2.1
716,267	-				-0.8
716,267	-				+3.2