Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0969 and Dshi_0970 overlap by 13 nucleotides Dshi_0970 and Dshi_0971 are separated by 11 nucleotides Dshi_0971 and Dshi_0972 are separated by 12 nucleotides Dshi_0972 and Dshi_0973 are separated by 10 nucleotides
Dshi_0969: Dshi_0969 - Mannitol dehydrogenase domain (RefSeq), at 990,448 to 991,947
_0969
Dshi_0970: Dshi_0970 - short-chain dehydrogenase/reductase SDR (RefSeq), at 991,935 to 992,426
_0970
Dshi_0971: Dshi_0971 - ABC transporter related (RefSeq), at 992,438 to 993,442
_0971
Dshi_0972: Dshi_0972 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 993,455 to 994,285
_0972
Dshi_0973: Dshi_0973 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 994,296 to 995,162
_0973
Position (kb) 992
993
994 Strain fitness (log2 ratio) -1
0
1 at 991.511 kb on + strand, within Dshi_0969 at 991.749 kb on + strand, within Dshi_0969 at 991.813 kb on + strand at 991.873 kb on + strand at 991.909 kb on + strand at 991.968 kb on + strand at 991.984 kb on + strand at 992.010 kb on - strand, within Dshi_0970 at 992.012 kb on + strand, within Dshi_0970 at 992.046 kb on - strand, within Dshi_0970 at 992.090 kb on - strand, within Dshi_0970 at 992.171 kb on + strand, within Dshi_0970 at 992.183 kb on + strand, within Dshi_0970 at 992.220 kb on - strand, within Dshi_0970 at 992.263 kb on - strand, within Dshi_0970 at 992.326 kb on - strand, within Dshi_0970 at 992.347 kb on - strand, within Dshi_0970 at 992.614 kb on + strand, within Dshi_0971 at 992.636 kb on - strand, within Dshi_0971 at 992.849 kb on - strand, within Dshi_0971 at 992.853 kb on + strand, within Dshi_0971 at 992.863 kb on + strand, within Dshi_0971 at 992.864 kb on + strand, within Dshi_0971 at 992.892 kb on - strand, within Dshi_0971 at 992.897 kb on - strand, within Dshi_0971 at 993.007 kb on + strand, within Dshi_0971 at 993.104 kb on - strand, within Dshi_0971 at 993.222 kb on - strand, within Dshi_0971 at 993.324 kb on - strand, within Dshi_0971 at 993.373 kb on + strand at 993.408 kb on - strand at 993.539 kb on + strand, within Dshi_0972 at 993.547 kb on - strand, within Dshi_0972 at 993.547 kb on - strand, within Dshi_0972 at 993.549 kb on + strand, within Dshi_0972 at 993.557 kb on - strand, within Dshi_0972 at 993.574 kb on - strand, within Dshi_0972 at 993.581 kb on - strand, within Dshi_0972 at 993.634 kb on + strand, within Dshi_0972 at 993.695 kb on - strand, within Dshi_0972 at 993.699 kb on + strand, within Dshi_0972 at 993.886 kb on + strand, within Dshi_0972 at 993.909 kb on + strand, within Dshi_0972 at 993.917 kb on - strand, within Dshi_0972 at 994.017 kb on + strand, within Dshi_0972 at 994.115 kb on - strand, within Dshi_0972 at 994.181 kb on - strand, within Dshi_0972 at 994.181 kb on - strand, within Dshi_0972 at 994.222 kb on + strand at 994.230 kb on + strand at 994.230 kb on + strand at 994.235 kb on + strand at 994.243 kb on - strand at 994.243 kb on - strand at 994.253 kb on - strand at 994.384 kb on - strand, within Dshi_0973
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 991,511 + Dshi_0969 0.71 -0.9 991,749 + Dshi_0969 0.87 -0.8 991,813 + -0.1 991,873 + -0.2 991,909 + +0.7 991,968 + -0.5 991,984 + +0.4 992,010 - Dshi_0970 0.15 +0.2 992,012 + Dshi_0970 0.16 -0.1 992,046 - Dshi_0970 0.23 +0.4 992,090 - Dshi_0970 0.32 -0.4 992,171 + Dshi_0970 0.48 +0.3 992,183 + Dshi_0970 0.50 -0.2 992,220 - Dshi_0970 0.58 -0.7 992,263 - Dshi_0970 0.67 +0.2 992,326 - Dshi_0970 0.79 -0.9 992,347 - Dshi_0970 0.84 -0.8 992,614 + Dshi_0971 0.18 +0.1 992,636 - Dshi_0971 0.20 -0.4 992,849 - Dshi_0971 0.41 -1.2 992,853 + Dshi_0971 0.41 -0.8 992,863 + Dshi_0971 0.42 -1.0 992,864 + Dshi_0971 0.42 -1.2 992,892 - Dshi_0971 0.45 -0.2 992,897 - Dshi_0971 0.46 -0.2 993,007 + Dshi_0971 0.57 -0.9 993,104 - Dshi_0971 0.66 -1.3 993,222 - Dshi_0971 0.78 +0.2 993,324 - Dshi_0971 0.88 -1.2 993,373 + +0.2 993,408 - -0.1 993,539 + Dshi_0972 0.10 -0.2 993,547 - Dshi_0972 0.11 -0.5 993,547 - Dshi_0972 0.11 -1.1 993,549 + Dshi_0972 0.11 -0.1 993,557 - Dshi_0972 0.12 -0.3 993,574 - Dshi_0972 0.14 -0.2 993,581 - Dshi_0972 0.15 -0.2 993,634 + Dshi_0972 0.22 -0.2 993,695 - Dshi_0972 0.29 -0.4 993,699 + Dshi_0972 0.29 +0.6 993,886 + Dshi_0972 0.52 -0.9 993,909 + Dshi_0972 0.55 +0.3 993,917 - Dshi_0972 0.56 -0.4 994,017 + Dshi_0972 0.68 +0.4 994,115 - Dshi_0972 0.79 +0.1 994,181 - Dshi_0972 0.87 -0.1 994,181 - Dshi_0972 0.87 -0.1 994,222 + -0.7 994,230 + +1.1 994,230 + -0.9 994,235 + -1.3 994,243 - -0.5 994,243 - -0.4 994,253 - -0.3 994,384 - Dshi_0973 0.10 -0.0
Or see this region's nucleotide sequence