Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0653 and Dshi_0654 are separated by 123 nucleotides Dshi_0654 and Dshi_0655 are separated by 250 nucleotides
Dshi_0653: Dshi_0653 - Prephenate dehydratase (RefSeq), at 655,248 to 656,090
_0653
Dshi_0654: Dshi_0654 - cytochrome c class I (RefSeq), at 656,214 to 656,738
_0654
Dshi_0655: Dshi_0655 - extracellular solute-binding protein family 5 (RefSeq), at 656,989 to 658,890
_0655
Position (kb)
656
657 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 655.651 kb on - strand, within Dshi_0653 at 655.753 kb on + strand, within Dshi_0653 at 655.758 kb on + strand, within Dshi_0653 at 655.763 kb on + strand, within Dshi_0653 at 655.767 kb on + strand, within Dshi_0653 at 655.777 kb on + strand, within Dshi_0653 at 655.785 kb on - strand, within Dshi_0653 at 655.799 kb on - strand, within Dshi_0653 at 655.985 kb on - strand, within Dshi_0653 at 655.993 kb on + strand, within Dshi_0653 at 656.273 kb on - strand, within Dshi_0654 at 656.273 kb on - strand, within Dshi_0654 at 656.564 kb on - strand, within Dshi_0654 at 656.588 kb on + strand, within Dshi_0654 at 656.691 kb on + strand at 656.776 kb on - strand at 656.861 kb on + strand at 656.869 kb on - strand at 656.930 kb on + strand at 656.933 kb on - strand at 656.945 kb on - strand at 656.973 kb on + strand at 656.996 kb on + strand at 657.044 kb on + strand at 657.059 kb on + strand at 657.067 kb on - strand at 657.096 kb on + strand at 657.096 kb on + strand at 657.190 kb on - strand, within Dshi_0655 at 657.199 kb on + strand, within Dshi_0655 at 657.262 kb on + strand, within Dshi_0655 at 657.268 kb on - strand, within Dshi_0655 at 657.270 kb on - strand, within Dshi_0655 at 657.270 kb on - strand, within Dshi_0655 at 657.379 kb on - strand, within Dshi_0655 at 657.388 kb on + strand, within Dshi_0655 at 657.388 kb on + strand, within Dshi_0655 at 657.396 kb on - strand, within Dshi_0655 at 657.396 kb on - strand, within Dshi_0655 at 657.403 kb on - strand, within Dshi_0655 at 657.488 kb on - strand, within Dshi_0655 at 657.548 kb on + strand, within Dshi_0655 at 657.634 kb on + strand, within Dshi_0655 at 657.677 kb on - strand, within Dshi_0655 at 657.734 kb on - strand, within Dshi_0655
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 655,651 - Dshi_0653 0.48 -2.0 655,753 + Dshi_0653 0.60 -1.2 655,758 + Dshi_0653 0.60 -1.3 655,763 + Dshi_0653 0.61 -1.7 655,767 + Dshi_0653 0.62 -1.9 655,777 + Dshi_0653 0.63 -3.8 655,785 - Dshi_0653 0.64 -2.4 655,799 - Dshi_0653 0.65 -4.6 655,985 - Dshi_0653 0.87 -2.8 655,993 + Dshi_0653 0.88 -1.5 656,273 - Dshi_0654 0.11 +0.1 656,273 - Dshi_0654 0.11 +0.3 656,564 - Dshi_0654 0.67 -1.8 656,588 + Dshi_0654 0.71 -1.4 656,691 + -0.6 656,776 - +1.2 656,861 + -1.3 656,869 - -0.2 656,930 + -1.5 656,933 - +1.7 656,945 - +0.3 656,973 + +0.0 656,996 + +0.5 657,044 + +0.6 657,059 + +1.2 657,067 - +0.8 657,096 + -0.0 657,096 + +0.2 657,190 - Dshi_0655 0.11 -0.2 657,199 + Dshi_0655 0.11 +0.7 657,262 + Dshi_0655 0.14 +0.5 657,268 - Dshi_0655 0.15 +0.7 657,270 - Dshi_0655 0.15 -0.2 657,270 - Dshi_0655 0.15 -0.1 657,379 - Dshi_0655 0.21 +0.4 657,388 + Dshi_0655 0.21 +0.3 657,388 + Dshi_0655 0.21 -0.2 657,396 - Dshi_0655 0.21 +0.7 657,396 - Dshi_0655 0.21 -0.6 657,403 - Dshi_0655 0.22 -0.5 657,488 - Dshi_0655 0.26 +0.5 657,548 + Dshi_0655 0.29 +0.0 657,634 + Dshi_0655 0.34 -0.0 657,677 - Dshi_0655 0.36 +1.2 657,734 - Dshi_0655 0.39 -0.0
Or see this region's nucleotide sequence