Strain Fitness in Shewanella oneidensis MR-1 around SO2132

Experiment: Gly-DL-Asp (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (C)
2,238,304	+				+0.7
2,238,304	+				-0.6
2,238,304	+				+0.2
2,238,304	+				-0.7
2,238,304	+				-0.8
2,238,305	+				+0.5
2,238,305	+				-2.7
2,238,305	+				+1.2
2,238,305	+				-0.5
2,238,305	+				+0.1
2,238,305	+				-0.5
2,238,305	+				+0.0
2,238,305	+				+3.7
2,238,305	+				+0.7
2,238,305	+				+0.4
2,238,305	+				+0.6
2,238,305	+				+0.3
2,238,305	+				-0.2
2,238,305	+				-0.2
2,238,305	+				+1.1
2,238,305	+				+0.1
2,238,305	+				+0.5
2,238,305	+				+0.7
2,238,305	+				-0.1
2,238,305	+				+2.1
2,238,305	+				+0.9
2,238,305	+				+1.4
2,238,305	+				+0.7
2,238,305	+				-0.5
2,238,305	+				-1.1
2,238,305	+				-0.6
2,238,305	+				+1.5
2,238,305	+				+0.3
2,238,305	+				-0.6
2,238,305	+				-0.1
2,238,305	+				+0.2
2,238,305	+				-0.3
2,238,305	+				+1.3
2,238,305	+				+0.2
2,238,305	+				+0.4
2,238,305	+				-0.1
2,238,305	+				+1.2
2,238,305	+				+0.3
2,238,305	+				-0.1
2,238,305	+				+0.6
2,238,305	+				-0.5
2,238,305	+				+0.7
2,238,305	+				+0.5
2,238,305	+				-0.5
2,238,305	+				-2.3
2,238,305	+				+0.9
2,238,305	+				+1.2
2,238,305	+				+0.0
2,238,305	+				+1.2
2,238,305	+				+0.5
2,238,305	+				+0.4
2,238,305	+				-0.1
2,238,305	+				+0.5
2,238,305	+				+0.2
2,238,305	+				+0.7
2,238,305	+				-0.3
2,238,305	+				+1.0
2,238,305	+				-0.0
2,238,310	+				-1.1
2,238,310	+				-0.2
2,238,310	+				-0.3
2,238,315	+				+0.6
2,238,315	+				+0.2
2,238,315	+				+1.4
2,238,315	+				-0.8
2,238,315	+				+1.8
2,238,315	+				+0.5
2,238,315	+				+0.5
2,238,315	+				-0.3
2,238,315	+				+0.5
2,238,315	+				+0.4
2,238,315	+				-0.2
2,238,315	+				-1.1
2,238,315	+				-0.7
2,238,315	+				+1.1
2,238,315	+				-0.8
2,238,315	+				+0.7
2,238,315	+				-0.5
2,238,315	+				+0.7
2,238,315	+				+0.2
2,238,315	+				+0.2
2,238,315	+				+0.8
2,238,315	+				+0.5
2,238,315	+				+0.2
2,238,315	+				-0.4
2,238,315	+				+0.2
2,238,315	+				+0.7
2,238,315	+				+1.0
2,238,315	+				-0.9
2,238,315	+				-0.5
2,238,315	+				+0.4
2,238,315	+				-0.1
2,238,315	+				-0.1
2,238,315	+				+0.3
2,238,315	+				+1.8
2,238,315	+				+0.0
2,238,315	+				+0.2
2,238,315	+				-1.1
2,238,315	+				+0.6
2,238,315	+				-0.6
2,238,315	+				-0.2
2,238,315	+				+0.8
2,238,315	+				+0.8
2,238,315	+				-1.8
2,238,315	+				+0.2
2,238,315	+				-1.0
2,238,315	+				+0.2
2,238,315	+				+2.0
2,238,315	+				+0.6
2,238,315	+				+1.1
2,238,315	+				-0.7
2,238,315	+				-0.1
2,238,315	+				-0.9
2,238,315	+				+0.2
2,238,315	+				+0.5
2,238,315	+				+0.0
2,238,315	+				+0.4
2,238,315	+				-1.8
2,238,315	+				+0.7
2,238,315	+				-0.6
2,238,315	+				-1.3
2,238,315	+				-0.8
2,238,315	+				+0.6
2,238,315	+				+0.5
2,238,315	+				-0.8
2,238,315	+				+0.0
2,238,315	+				+0.6
2,238,315	+				-0.8
2,238,325	+				-0.5
2,238,327	+				+0.9
2,238,327	+				-0.0
2,238,337	+				+0.9
2,238,337	+				+0.3
2,238,337	+				-0.2
2,238,347	-				+1.0
2,238,362	-				-0.9
2,238,370	+				-0.1
2,238,370	+				-0.1
2,238,370	+				+1.3
2,238,370	+				+0.7
2,238,378	-				+0.9
2,238,384	+				-0.3
2,238,384	+				+0.6
2,238,386	+		SO2132	0.10	-0.5
2,238,386	+		SO2132	0.10	+0.8
2,238,386	+		SO2132	0.10	+1.1
2,238,386	+		SO2132	0.10	+0.3
2,238,386	+		SO2132	0.10	+0.9
2,238,392	-		SO2132	0.11	+0.9
2,238,394	-		SO2132	0.11	-0.4
2,238,394	-		SO2132	0.11	-0.2
2,238,394	-		SO2132	0.11	+0.6
2,238,394	-		SO2132	0.11	+1.9
2,238,394	-		SO2132	0.11	-1.1
2,238,394	-		SO2132	0.11	+0.2
2,238,394	-		SO2132	0.11	-0.3
2,238,394	-		SO2132	0.11	-0.2
2,238,394	-		SO2132	0.11	-0.1
2,238,394	-		SO2132	0.11	-1.1
2,238,394	-		SO2132	0.11	+0.0
2,238,394	-		SO2132	0.11	+0.4
2,238,394	-		SO2132	0.11	-3.0
2,238,394	-		SO2132	0.11	-2.1
2,238,394	-		SO2132	0.11	+0.3
2,238,396	+		SO2132	0.11	+0.2
2,238,403	+		SO2132	0.12	-1.1
2,238,403	+		SO2132	0.12	-0.1
2,238,408	+		SO2132	0.13	-0.4
2,238,411	-		SO2132	0.13	+0.2
2,238,411	-		SO2132	0.13	+1.0
2,238,411	-		SO2132	0.13	+1.4
2,238,411	-		SO2132	0.13	+0.8
2,238,411	-		SO2132	0.13	+0.5
2,238,416	-		SO2132	0.14	+0.5
2,238,416	-		SO2132	0.14	+0.5
2,238,416	-		SO2132	0.14	+0.0
2,238,418	+		SO2132	0.14	+1.2
2,238,418	+		SO2132	0.14	+0.8
2,238,418	+		SO2132	0.14	-0.4
2,238,418	+		SO2132	0.14	+0.5
2,238,421	-		SO2132	0.14	+0.2
2,238,426	-		SO2132	0.15	+1.4
2,238,426	-		SO2132	0.15	+1.0
2,238,426	-		SO2132	0.15	-0.9
2,238,426	-		SO2132	0.15	+1.0
2,238,426	-		SO2132	0.15	+0.3
2,238,427	-		SO2132	0.15	-0.6
2,238,430	+		SO2132	0.15	-0.2
2,238,430	+		SO2132	0.15	-0.0
2,238,430	+		SO2132	0.15	-0.3
2,238,430	+		SO2132	0.15	+0.7
2,238,430	+		SO2132	0.15	+0.1
2,238,430	+		SO2132	0.15	+1.2
2,238,430	+		SO2132	0.15	-0.1
2,238,430	+		SO2132	0.15	+0.0
2,238,430	+		SO2132	0.15	+0.0
2,238,430	+		SO2132	0.15	+0.2
2,238,430	+		SO2132	0.15	+1.9
2,238,430	+		SO2132	0.15	+0.1
2,238,430	+		SO2132	0.15	-0.5
2,238,438	-		SO2132	0.16	-0.5
2,238,438	-		SO2132	0.16	-2.5
2,238,438	-		SO2132	0.16	+1.3
2,238,438	-		SO2132	0.16	+0.1
2,238,438	-		SO2132	0.16	+0.7
2,238,438	-		SO2132	0.16	+0.7
2,238,438	-		SO2132	0.16	+0.6
2,238,438	-		SO2132	0.16	-0.6
2,238,438	-		SO2132	0.16	-1.1
2,238,438	-		SO2132	0.16	+0.5
2,238,438	-		SO2132	0.16	-0.3
2,238,500	+		SO2132	0.24	+1.6
2,238,503	-		SO2132	0.24	+0.4
2,238,505	+		SO2132	0.24	-0.9
2,238,506	-		SO2132	0.24	-0.1
2,238,508	-		SO2132	0.25	+0.3
2,238,508	-		SO2132	0.25	+0.1
2,238,508	-		SO2132	0.25	+0.3
2,238,508	-		SO2132	0.25	-1.0
2,238,508	-		SO2132	0.25	-1.5
2,238,508	-		SO2132	0.25	+0.7
2,238,508	-		SO2132	0.25	+0.9
2,238,508	-		SO2132	0.25	+0.9
2,238,509	+		SO2132	0.25	+0.0
2,238,513	-		SO2132	0.25	+0.5
2,238,519	+		SO2132	0.26	+0.4
2,238,519	+		SO2132	0.26	+0.2
2,238,519	+		SO2132	0.26	+0.6
2,238,525	+		SO2132	0.27	-0.1
2,238,525	+		SO2132	0.27	-1.5
2,238,525	+		SO2132	0.27	-0.5
2,238,527	-		SO2132	0.27	+0.5
2,238,530	+		SO2132	0.27	-0.4
2,238,530	+		SO2132	0.27	-1.9
2,238,533	-		SO2132	0.28	-0.5
2,238,533	-		SO2132	0.28	-0.6
2,238,540	+		SO2132	0.29	+0.9
2,238,547	-		SO2132	0.29	+0.5
2,238,547	-		SO2132	0.29	+1.5
2,238,548	-		SO2132	0.30	+0.6
2,238,559	-		SO2132	0.31	-0.2
2,238,560	-		SO2132	0.31	+0.2
2,238,564	+		SO2132	0.31	+0.5
2,238,564	+		SO2132	0.31	+0.2
2,238,566	+		SO2132	0.32	+0.1
2,238,566	+		SO2132	0.32	+0.3
2,238,566	+		SO2132	0.32	+0.7
2,238,566	+		SO2132	0.32	-0.0
2,238,566	+		SO2132	0.32	+1.9
2,238,566	+		SO2132	0.32	+0.7
2,238,566	+		SO2132	0.32	-0.5
2,238,566	+		SO2132	0.32	+0.2
2,238,566	+		SO2132	0.32	+1.2
2,238,566	+		SO2132	0.32	+0.1
2,238,566	+		SO2132	0.32	-0.6
2,238,566	+		SO2132	0.32	+0.7
2,238,574	-		SO2132	0.33	+0.3
2,238,574	-		SO2132	0.33	+0.1
2,238,574	-		SO2132	0.33	+0.2
2,238,574	-		SO2132	0.33	+1.0
2,238,574	-		SO2132	0.33	+0.7
2,238,574	-		SO2132	0.33	+0.0
2,238,574	-		SO2132	0.33	-0.8
2,238,574	-		SO2132	0.33	-0.7
2,238,574	-		SO2132	0.33	+0.0
2,238,574	-		SO2132	0.33	+0.0
2,238,574	-		SO2132	0.33	+0.6
2,238,574	-		SO2132	0.33	+0.6
2,238,574	-		SO2132	0.33	+1.8
2,238,574	-		SO2132	0.33	-0.6
2,238,574	-		SO2132	0.33	+0.1
2,238,624	+		SO2132	0.39	+0.9
2,238,624	+		SO2132	0.39	+1.0
2,238,624	+		SO2132	0.39	-0.1
2,238,624	+		SO2132	0.39	+0.7
2,238,628	+		SO2132	0.39	+0.1
2,238,632	-		SO2132	0.40	+0.2
2,238,632	-		SO2132	0.40	-1.2
2,238,633	+		SO2132	0.40	+0.9
2,238,646	-		SO2132	0.41	+1.3
2,238,653	+		SO2132	0.42	+0.5
2,238,653	+		SO2132	0.42	+0.8
2,238,661	-		SO2132	0.43	-1.5
2,238,697	+		SO2132	0.47	+1.2
2,238,698	-		SO2132	0.47	+0.1
2,238,698	-		SO2132	0.47	+1.1
2,238,698	-		SO2132	0.47	-0.1
2,238,761	-		SO2132	0.55	-0.3
2,238,768	-		SO2132	0.56	+0.5
2,238,775	-		SO2132	0.57	-0.6
2,238,830	+		SO2132	0.63	+0.1
2,238,830	+		SO2132	0.63	+0.9
2,238,846	-		SO2132	0.65	+0.2
2,238,848	-		SO2132	0.65	+0.2
2,238,889	+		SO2132	0.70	-1.0
2,238,892	-		SO2132	0.71	+0.1
2,238,899	-		SO2132	0.71	+0.3
2,238,906	+		SO2132	0.72	-0.1
2,238,906	+		SO2132	0.72	-1.7
2,238,906	+		SO2132	0.72	+0.2
2,238,914	-		SO2132	0.73	-0.3
2,238,922	-		SO2132	0.74	+0.5
2,238,922	-		SO2132	0.74	+0.8
2,238,922	-		SO2132	0.74	-0.4
2,238,923	-		SO2132	0.74	+0.7
2,238,938	+		SO2132	0.76	-0.4
2,238,946	-		SO2132	0.77	-0.4
2,238,947	-		SO2132	0.77	+0.8
2,238,947	-		SO2132	0.77	+1.0
2,238,969	-		SO2132	0.80	-0.5
2,238,969	-		SO2132	0.80	+0.4
2,238,969	-		SO2132	0.80	-0.5
2,238,970	-		SO2132	0.80	+1.6
2,238,992	+		SO2132	0.83	+0.6
2,239,004	+		SO2132	0.84	-0.3
2,239,040	+		SO2132	0.88	+0.2
2,239,041	+		SO2132	0.88	+1.5
2,239,041	+		SO2132	0.88	-0.5
2,239,041	+		SO2132	0.88	+0.2
2,239,049	-		SO2132	0.89	+1.3
2,239,049	-		SO2132	0.89	+0.2
2,239,050	+		SO2132	0.89	-1.9
2,239,062	+				-0.5
2,239,062	+				+0.1
2,239,062	+				-0.1
2,239,062	+				-1.0
2,239,062	+				+0.7
2,239,062	+				-0.8
2,239,062	+				+0.8
2,239,062	+				+0.8
2,239,062	+				+0.0
2,239,062	+				-0.8
2,239,062	+				+0.7
2,239,062	+				-1.1
2,239,062	+				-1.1
2,239,062	+				-0.2
2,239,062	+				-1.3
2,239,062	+				-0.1
2,239,062	+				-1.4
2,239,062	+				+1.0
2,239,070	-				+0.8
2,239,070	-				-0.1
2,239,070	-				+0.1
2,239,070	-				-0.4
2,239,070	-				+0.6
2,239,070	-				+0.2
2,239,070	-				+0.7
2,239,070	-				+0.4
2,239,070	-				+0.3
2,239,070	-				+0.1
2,239,070	-				+0.6
2,239,070	-				-0.7
2,239,070	-				-0.0
2,239,070	-				-1.7
2,239,070	-				+0.2
2,239,070	-				+0.4
2,239,097	+				-0.1
2,239,114	+				+0.6
2,239,114	+				+0.8
2,239,125	+				+0.0
2,239,133	-				+1.5
2,239,134	-				+0.7
2,239,181	+				+0.5
2,239,181	+				-0.7
2,239,245	+				-0.9
2,239,245	+				+1.4
2,239,253	-				-0.9
2,239,287	+				+0.3
2,239,289	+				+0.3
2,239,289	+				+0.2
2,239,297	-				+0.7
2,239,332	+		SO2133	0.12	+0.1
2,239,361	+		SO2133	0.14	-0.3
2,239,380	+		SO2133	0.15	-0.3
2,239,383	-		SO2133	0.15	+1.2
2,239,388	-		SO2133	0.15	-0.5
2,239,388	-		SO2133	0.15	+0.7
2,239,388	-		SO2133	0.15	+0.2
2,239,397	+		SO2133	0.16	-0.4
2,239,403	+		SO2133	0.16	+1.4
2,239,418	+		SO2133	0.17	-0.1
2,239,418	+		SO2133	0.17	-1.4
2,239,418	+		SO2133	0.17	+0.9
2,239,418	+		SO2133	0.17	-0.3
2,239,418	+		SO2133	0.17	+1.5
2,239,418	+		SO2133	0.17	+0.3
2,239,426	-		SO2133	0.18	+2.1
2,239,426	-		SO2133	0.18	+1.0
2,239,426	-		SO2133	0.18	+0.5
2,239,426	-		SO2133	0.18	+1.0
2,239,426	-		SO2133	0.18	+1.5
2,239,432	+		SO2133	0.18	+1.2
2,239,436	-		SO2133	0.18	+0.2
2,239,440	-		SO2133	0.18	+0.9
2,239,440	-		SO2133	0.18	-0.8
2,239,447	-		SO2133	0.19	+0.3
2,239,455	+		SO2133	0.19	-0.5
2,239,490	+		SO2133	0.21	-0.7
2,239,490	+		SO2133	0.21	-0.2
2,239,497	+		SO2133	0.22	+0.6
2,239,497	+		SO2133	0.22	+1.5
2,239,497	+		SO2133	0.22	-0.0
2,239,505	-		SO2133	0.22	-0.6
2,239,542	+		SO2133	0.25	-1.3
2,239,578	-		SO2133	0.27	+0.3
2,239,620	-		SO2133	0.29	+0.5
2,239,627	-		SO2133	0.30	+0.5
2,239,641	+		SO2133	0.30	+0.6
2,239,641	+		SO2133	0.30	-0.7
2,239,641	+		SO2133	0.30	-1.5
2,239,641	+		SO2133	0.30	-0.2
2,239,649	-		SO2133	0.31	+0.8
2,239,649	-		SO2133	0.31	+0.9
2,239,649	-		SO2133	0.31	-0.3
2,239,726	+		SO2133	0.36	-0.3
2,239,828	+		SO2133	0.42	+0.1
2,239,828	+		SO2133	0.42	-0.1
2,239,828	+		SO2133	0.42	+0.9
2,239,828	+		SO2133	0.42	-0.2
2,239,855	+		SO2133	0.43	+0.8
2,239,855	+		SO2133	0.43	+1.8
2,239,855	+		SO2133	0.43	-0.4
2,239,855	+		SO2133	0.43	+0.1
2,239,855	+		SO2133	0.43	+0.9
2,239,863	-		SO2133	0.44	-0.2
2,239,863	-		SO2133	0.44	-0.1
2,239,863	-		SO2133	0.44	+0.3
2,239,863	-		SO2133	0.44	+1.7
2,239,863	-		SO2133	0.44	-0.0
2,239,863	-		SO2133	0.44	+0.2
2,239,863	-		SO2133	0.44	+0.5
2,239,910	+		SO2133	0.47	+0.4
2,239,913	+		SO2133	0.47	+1.8
2,239,918	-		SO2133	0.47	+0.3
2,239,921	+		SO2133	0.47	-1.2
2,239,921	+		SO2133	0.47	-0.7
2,239,921	+		SO2133	0.47	+0.2
2,239,921	+		SO2133	0.47	+0.0
2,239,929	-		SO2133	0.48	+1.4
2,239,929	-		SO2133	0.48	+0.1
2,239,929	-		SO2133	0.48	+0.7
2,239,929	-		SO2133	0.48	+0.3
2,240,071	+		SO2133	0.56	-0.1
2,240,076	+		SO2133	0.57	+0.8
2,240,076	+		SO2133	0.57	-0.2
2,240,084	-		SO2133	0.57	+1.5
2,240,084	-		SO2133	0.57	-0.3
2,240,094	+		SO2133	0.58	+0.2
2,240,108	-		SO2133	0.58	+0.7
2,240,110	-		SO2133	0.59	+0.2